KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:08 2014 Check: 00 .. Name: ENSP00000403495/1-205 Len: 265 Check: 9579 Weight: 1.00 Name: ENSBTAP00000000018/1-204 Len: 265 Check: 9140 Weight: 1.00 Name: bmy_03157T0/1-265 Len: 265 Check: 7865 Weight: 1.00 Name: BACU015903/1-205 Len: 265 Check: 1174 Weight: 1.00 Name: ENSTTRP00000013350/1-205 Len: 265 Check: 1534 Weight: 1.00 // 1 50 ENSP00000403495/1-205 MTPPERLFLP RVCGTTLHLL LLGLLLVLLP GAQGLPGVGL TPSAAQTARQ ENSBTAP00000000018/1-204 MTPPGRLYLL RVCSTP-PLL LLGLLLALPL EAQGLRGIGL TPSAAQPAHQ bmy_03157T0/1-265 MTPPGRLYLL RVCSTPLLLL LLGLLLALPR EAQGLSGVGL PLSTAQPAHQ BACU015903/1-205 MTPPGRLYLL RVCSTPLLLL LLGLLLALPH KAQGLSGVGL PPSTAQPAHQ ENSTTRP00000013350/1-205 MTPPGRLYLL RVCSTPLLLL LLGLLLALPP EAQGLSGVGL PPSTAQPAHQ 51 100 ENSP00000403495/1-205 HPKMHLAHST LKPAAHLI-- ---------- ---------- ---------- ENSBTAP00000000018/1-204 QLPTPFTRGT LKPAAHLV-- ---------- ---------- ---------- bmy_03157T0/1-265 HPPNHFTRGT FKPAAHLVGK HSPALLDMDP SIPSSSPPLP LPSVLPTIPQ BACU015903/1-205 HPPNHFTRGT FKPAAHLV-- ---------- ---------- ---------- ENSTTRP00000013350/1-205 HPPNHFTRGT FKPAAHLV-- ---------- ---------- ---------- 101 150 ENSP00000403495/1-205 ---------- ---------- --------GD PSKQNSLLWR ANTDRAFLQD ENSBTAP00000000018/1-204 ---------- ---------- --------GD PSTQDSLRWR ANTDRAFLRH bmy_03157T0/1-265 ELSPAPASSG IETSDPQVLD RHPLWLFLGD PSTQDSLXWR ANTDRAFLRH BACU015903/1-205 ---------- ---------- --------GD PSTQDSLRWR ANTDRAFLRH ENSTTRP00000013350/1-205 ---------- ---------- --------GD PSTQDSLRWR ANTDRAFLRH 151 200 ENSP00000403495/1-205 GFSLSNNSLL VPTSGIYFVY SQVVFSGKAY SPKATSSPLY LAHEVQLFSS ENSBTAP00000000018/1-204 GFSLSNNSLL VPTSGLYFVY SQVVFSGRGC FPRATPTPLY LAHEVQLFSP bmy_03157T0/1-265 GFSLSNNSLL VPTSGLYFVY SQVVFSGEGC FPKATPTPLY LAHEVXLFSS BACU015903/1-205 GFSLSNNSLL VPTSGLYFVY SQVVFSGEGC FPKATPTPLY LAHEVQLFSS ENSTTRP00000013350/1-205 GFSLSNNSLL VPTSGLYFVY SQVVFSGEGC FPKATPTPLY LAHEVQLFSS 201 250 ENSP00000403495/1-205 QYPFHVPLLS SQKMVYPGLQ EPWLHSMYHG AAFQLTQGDQ LSTHTDGIPH ENSBTAP00000000018/1-204 QYPFHVPLLS AQKSVCPGPQ GPWVRSVYQG AVFLLTRGDQ LSTHTDGISH bmy_03157T0/1-265 QYPFHVPLLS AQKSVCPGPQ GPWVRSVYQG AVFLLTRGDQ LSTHTDGISH BACU015903/1-205 QYPFHVPLLS AQKSVCPGPQ GPWVLSVYQG AVFLLTRGDQ LSTHTDGISH ENSTTRP00000013350/1-205 QYPFHVPLLS AQKSVCPGPQ GPWVRSVYQG AVFLLTRGDQ LSTHTDGISH 251 300 ENSP00000403495/1-205 LVLSPSTVFF GAFAL ENSBTAP00000000018/1-204 LLLSPSSVFF GAFAL bmy_03157T0/1-265 LLLSPSSVFF GAFAL BACU015903/1-205 LLLSPSSVFF GAFAL ENSTTRP00000013350/1-205 LLLSPSSVFF GAFAL