KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:08 2014 Check: 00 .. Name: BACU000927/1-724 Len: 742 Check: 1170 Weight: 1.00 Name: ENSTTRP00000016325/1-314 Len: 742 Check: 7192 Weight: 1.00 Name: ENSP00000448054/1-326 Len: 742 Check: 4459 Weight: 1.00 Name: bmy_08310T0/1-326 Len: 742 Check: 2251 Weight: 1.00 Name: ENSBTAP00000000024/1-326 Len: 742 Check: 2984 Weight: 1.00 // 1 50 BACU000927/1-724 MKQDATRNAA YTVDCEDYVH VVEFNPFESG DSGNLIAYGG NNFVVIGTCT ENSTTRP00000016325/1-314 MKQDATRNAA YTVDCEDYVH VVEFNPFESG DSGNLIAYGG NNFVVIGTCT ENSP00000448054/1-326 MKQDASRNAA YTVDCEDYVH VVEFNPFENG DSGNLIAYGG NNYVVIGTCT bmy_08310T0/1-326 MKQDATRNAA YTVDCEDYVH VVEFNPFESG DSGNLIAYGG NNFVVIGTCT ENSBTAP00000000024/1-326 MKQDATRNAA YTVDCEDYVH VVEFNPFESG DSGNLIAYGG NNFVFVGTCT 51 100 BACU000927/1-724 FQEEEADIEG IQYKTLRTFH HGVRVDGIAW SPETRLNSLP PVIKFCTSAA ENSTTRP00000016325/1-314 FQEEEADIEG IQYKTLRTFH HGVRVDGIAW SPETRLDSLP PVIKFCTSAA ENSP00000448054/1-326 FQEEEADVEG IQYKTLRTFH HGVRVDGIAW SPETRLDSLP PVIKFCTSAA bmy_08310T0/1-326 FQEEEADIEG IQYKTLRTFH HGVRVDGIAW SPETRLNSLP PVIKFCTSAA ENSBTAP00000000024/1-326 FQEEEADVEG IQYKTLRTFH HGVRVDGIAW SPETRLDSLP PVIKFCTSAA 101 150 BACU000927/1-724 DMKIRLFTSD LQDKNEYKVL EGHSDFINGL VFDPKEGQEI ASVSDDHTCR ENSTTRP00000016325/1-314 DKKIRLFTSD LQDKNEYKVL EGHTDFINGL VFDPKEGQEI ASVSDDHTCR ENSP00000448054/1-326 DMKIRLFTSD LQDKNEYKVL EGHTDFINGL VFDPKEGQEI ASVSDDHTCR bmy_08310T0/1-326 DMKIRLFTSD LQDKNEYKVL EGHSDFINGL VFDPKEGQEI ASVSDDHTCR ENSBTAP00000000024/1-326 DMKIRLFTSD LQDKNEYKVL EGHSDFINGL VFDPREGQEI ASVSDDHTCR 151 200 BACU000927/1-724 IWNLEGIQTA HFLLRSPGMS VCWHPEESFK LMVAEKNGTI RFYDLLAQQA ENSTTRP00000016325/1-314 IWNLEGIQTA HFLLHSPGMS VCWHPEESFK M---DAEKTI RFYDLLAQQA ENSP00000448054/1-326 IWNLEGVQTA HFVLHSPGMS VCWHPEETFK LMVAEKNGTI RFYDLLAQQA bmy_08310T0/1-326 IWNLEGIQTA HFLLRSPGMS VCWHPEESFK LMVAEKNGTI RFYDLXAQQA ENSBTAP00000000024/1-326 IWNLEGIQTA HFVLHSPGMS VCWHPEETFK LMVAEKNGTI RFYDLLAQQA 201 250 BACU000927/1-724 ILSLESEQMP LMSAHWCLKN TFKVGAVAGN DWLIWDITRS ---------- ENSTTRP00000016325/1-314 ILSLESNQNR CMSAH-C-KN T---GGAAGC ---IWDITSS -YPQDKRPVH ENSP00000448054/1-326 ILSLESEQVP LMSAHWCLKN TFKVGAVAGN DWLIWDITRS SYPQNKRPVH bmy_08310T0/1-326 ILSLESEQMP LMSAHWCLKN TFKVGAVAGN DWLIWDITRS SYPQDKRPVH ENSBTAP00000000024/1-326 ILSLESEQMP LMSAHWCLKN TFKVGAVAGN DWLIWDITRS SYPQDKRPVH 251 300 BACU000927/1-724 -------RWS TINENLFATT GYPGKMASQF QIHHLGHPQV PAIQQKRTVA ENSTTRP00000016325/1-314 MDRACLFRWS TINENLFATT GYPGKMASQF QIHHLGHPQ- ---------- ENSP00000448054/1-326 MDRACLFRWS TISENLFATT GYPGKMASQF QIHHLGHPQ- ---------- bmy_08310T0/1-326 MDRACLFRWS TINENLFATT GYPGKMASQF QIHHLGHPQ- ---------- ENSBTAP00000000024/1-326 MDRACLFRWS TVNENLFATT GYPGKMMSQF QIHHLGHPQ- ---------- 301 350 BACU000927/1-724 FLNQFVVHTV QFLNRFSTVC EEKLADLSLR IQQIETTLNI LDAKLSSIPG ENSTTRP00000016325/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000448054/1-326 ---------- ---------- ---------- ---------- ---------- bmy_08310T0/1-326 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000024/1-326 ---------- ---------- ---------- ---------- ---------- 351 400 BACU000927/1-724 LDDVTFEVSP VSVTRITNET HSETTSEQSQ LNSLQDSGPQ ETEVTPENIL ENSTTRP00000016325/1-314 ---------P I--------- ---------- ---------- ---------- ENSP00000448054/1-326 ---------P I--------- ---------- ---------- ---------- bmy_08310T0/1-326 ---------P I--------- ---------- ---------- ---------- ENSBTAP00000000024/1-326 ---------P I--------- ---------- ---------- ---------- 401 450 BACU000927/1-724 TVAKDPRYAR YLKMVQVVGE KCLRGFKGHQ LEEDILAPYS DKDLSESIRN ENSTTRP00000016325/1-314 ---------- ------LVG- ---------- ---------- ---------- ENSP00000448054/1-326 ---------- ------LMG- ---------- ---------- ---------- bmy_08310T0/1-326 ---------- ------LVG- ---------- ---------- ---------- ENSBTAP00000000024/1-326 ---------- ------LIG- ---------- ---------- ---------- 451 500 BACU000927/1-724 GVEAWCRRYL VLNGSQHHLH YIVSLAVGIC HRVPQRAGHT CLDGHSEMER ENSTTRP00000016325/1-314 ---------- ---------- ---SVAVG-- ---------- ---------- ENSP00000448054/1-326 ---------- ---------- ---SVAVG-- ---------- ---------- bmy_08310T0/1-326 ---------- ---------- ---SVAVG-- ---------- ---------- ENSBTAP00000000024/1-326 ---------- ---------- ---SVAVG-- ---------- ---------- 501 550 BACU000927/1-724 PTRRGVHRPG PIGAHILGWS GRHCWLPLSS ASMSLCQRLD KVNGVTVHGA ENSTTRP00000016325/1-314 ---------- ---------- ---------- ---------- --SGLSWHRT ENSP00000448054/1-326 ---------- ---------- ---------- ---------- --SGLSWHRT bmy_08310T0/1-326 ---------- ---------- ---------- ---------- --SGLSWHRS ENSBTAP00000000024/1-326 ---------- ---------- ---------- ---------- --SGLSWHRT 551 600 BACU000927/1-724 TPLFSACCSG STACVNVLLE FGAKALLEVH LASPIHEAVK RGNRECMEIL ENSTTRP00000016325/1-314 LPL---CAIG GD-------- ---------- ---------- ---------- ENSP00000448054/1-326 LPL---CVIG GD-------- ---------- ---------- ---------- bmy_08310T0/1-326 LPL---CAIG GD-------- ---------- ---------- ---------- ENSBTAP00000000024/1-326 LPL---CAIG SD-------- ---------- ---------- ---------- 601 650 BACU000927/1-724 LANNVNIDQE VPHLGIPLYV ACNYQRLDCV KKLLELGANV DHGQWLDTPL ENSTTRP00000016325/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000448054/1-326 ---------- ---------- ---------- ---------- ---------- bmy_08310T0/1-326 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000024/1-326 ---------- ---------- ---------- ---------- ---------- 651 700 BACU000927/1-724 HAAVKQNSVE IIHLLIDCGA NLKCRNAQGK SALHLTAPKS GVEQVLLLRE ENSTTRP00000016325/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000448054/1-326 ---------- ---------- ---------- ---------- ---------- bmy_08310T0/1-326 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000024/1-326 ---------- ---------- ---------- ---------- ---------- 701 750 BACU000927/1-724 GPPALSQLCR LCVRKCLGRI CHQTIHKLYL PEPLEKFLLC Q- ENSTTRP00000016325/1-314 ---------- ---------- -----HKLL- ------FWVT EM ENSP00000448054/1-326 ---------- ---------- -----HKLL- ------FWVT EV bmy_08310T0/1-326 ---------- ---------- -----HKLL- ------FWVT EM ENSBTAP00000000024/1-326 ---------- ---------- -----HKLL- ------FWVT EM