KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:09 2014 Check: 00 .. Name: BACU016075/1-1329 Len: 1329 Check: 5566 Weight: 1.00 Name: bmy_10336T0/1-617 Len: 1329 Check: 3090 Weight: 1.00 Name: ENSTTRP00000012026/1-615 Len: 1329 Check: 6125 Weight: 1.00 Name: ENSP00000327650/1-617 Len: 1329 Check: 2112 Weight: 1.00 Name: ENSBTAP00000000029/1-617 Len: 1329 Check: 2233 Weight: 1.00 // 1 50 BACU016075/1-1329 MAFPHRPDAP ELPDFSMLKR LARDQLIYLL EQLPGKKDLF IEADLMSPLD bmy_10336T0/1-617 MAFPHRPDAP ELPDFSMLKR LARDQLIYLL EQLPGKKDLF IEADLMSPLD ENSTTRP00000012026/1-615 MAFPHRPDAP ELPDFSMLKR LARDQLIYLL EQLPGKKDLF IEADLMSPLD ENSP00000327650/1-617 MAFPHRPDAP ELPDFSMLKR LARDQLIYLL EQLPGKKDLF IEADLMSPLD ENSBTAP00000000029/1-617 MAFPHRPDAP ELPDFSMLKR LARDQLIYLL EQLPGKKDLF IEADLMSPLD 51 100 BACU016075/1-1329 RIANVSILKQ HEVDKLYKVE NKPAFSSSEQ LCFLVRPRIK NMRYIANLVN bmy_10336T0/1-617 RIANVSILKQ HEVDKLYKVE NKPAFSSSEQ LC-------- ---------- ENSTTRP00000012026/1-615 RIANVSILKQ HEVDKLYKVE NKPAFSSSEQ LC-------- ---------- ENSP00000327650/1-617 RIANVSILKQ HEVDKLYKVE NKPALSSNEQ LC-------- ---------- ENSBTAP00000000029/1-617 RIANVSILKQ HEVDKLYKVE NKPALSSSEQ LC-------- ---------- 101 150 BACU016075/1-1329 ADKMAGRTRK YKVIFSPQKV SLDPGGNDIG LCFLVRPRIK NMRYIANLVN bmy_10336T0/1-617 ---------- ---------- ---------- --FLVRPRIK NMRYIANLVN ENSTTRP00000012026/1-615 ---------- ---------- ---------- --FLVRPRIK NMRYIANLVN ENSP00000327650/1-617 ---------- ---------- ---------- --FLVRPRIK NMRYIASLVN ENSBTAP00000000029/1-617 ---------- ---------- ---------- --FLVRPRIK NMRYIASLVN 151 200 BACU016075/1-1329 ADKMAGRTRK YKVIFSPQKF YACEMVLEEE GIYGDVSCDE WAFSLLPLDV bmy_10336T0/1-617 ADKMAGRTRK YKVIFSPQKF YACEMVLEEE GIYGDVSCDE WAFSLLPLDV ENSTTRP00000012026/1-615 ADKMAGRTRK YKVIFSPQKF YACEMVLEEE GIYGDVSCDE WAFSLLPLDV ENSP00000327650/1-617 ADKLAGRTRK YKVIFSPQKF YACEMVLEEE GIYGDVSCDE WAFSLLPLDV ENSBTAP00000000029/1-617 ADKMAGRTRK YKVIFSPQKF YACEMVLEEE GVYGDVSCDE WAFSLLPLDV 201 250 BACU016075/1-1329 DLLSMELPEF FRDYFLEGDQ CWINTVAQAL HLLSTLYGPF PNCYGIGRCA bmy_10336T0/1-617 DLLSMELPEF FRDYFLEGDQ CWINTVAQAL HLLSTLYGPF PNCYGIGRCA ENSTTRP00000012026/1-615 DLLSMELPEF FRDYFLEGDQ CWINTVAQAL HLLSTLYGPF PNCYGIGRCA ENSP00000327650/1-617 DLLSMELPEF FRDYFLEGDQ RWINTVAQAL HLLSTLYGPF PNCYGIGRCA ENSBTAP00000000029/1-617 DLLSMELPEF FRDYFLEGDQ RWINTLAQAL HLLSTLYGPF PNCYGIGRCA 251 300 BACU016075/1-1329 KMSHELWRKL EEEEDGETKG RRPEIGHVFL LDRDVDFVTA LCSQVVYEGL bmy_10336T0/1-617 KMSHELWRKL EEEEDGETKG RRPEIGHVFL LDRDVDFVTA LCSQVVYEGL ENSTTRP00000012026/1-615 KMSHELWRKL EEEEDGETKG RRPEIGHVFL LDRDVDFVTA LCSQVVYEGL ENSP00000327650/1-617 KMAYELWRNL EEEEDGETKG RRPEIGHIFL LDRDVDFVTA LCSQVVYEGL ENSBTAP00000000029/1-617 KMSYELWKRL EEEEDGETKG RRPEIGHIFL LDRDVDFVTA LCSQVVYEGL 301 350 BACU016075/1-1329 VDDTFRVKCG SVDFGPEVTS SDKSLKVLLN AEDKVFNEIR NEHFSNVFGF bmy_10336T0/1-617 VDDTFRVKCG SVDFGPEVTS SDKSLKVLLN AEDKVFNEIR NEHFSNVFGF ENSTTRP00000012026/1-615 VDDTFRVKCG SVDFGPEVTS SDKSLKVLLN AEDKVFNEIR NEHFSNVFGF ENSP00000327650/1-617 VDDTFRIKCG SVDFGPEVTS SDKSLKVLLN AEDKVFNEIR NEHFSNVFGF ENSBTAP00000000029/1-617 VDDTFRIKCG SVDFGPEVTS SDKSLKVLLN AEDKVFNEIR NEHFSNVFGF 351 400 BACU016075/1-1329 LSQKARNLQA QYDRRRGMDI KQMKNFVSQE LKGLKQEHRL LSLHIGACES bmy_10336T0/1-617 LSQKARNLQA QYDRRRGMDI KQMKNFVSQE LKGLKQEHRL LSLHIGACES ENSTTRP00000012026/1-615 LSQKARNLQA QYDRRRGMDI KQMKNFVSQE LKGLKQEHRL LSLHIGACES ENSP00000327650/1-617 LSQKARNLQA QYDRRRGMDI KQMKNFVSQE LKGLKQEHRL LSLHIGACES ENSBTAP00000000029/1-617 LSQKARNLQA QYDRRRGMDI KQMKNFVSQE LKGLKQEHRL LSLHIGACES 401 450 BACU016075/1-1329 IMKKKTKQDF QELIKTEHAL LEGFSIREST NYIEEHIDRQ VSPIESLRLM bmy_10336T0/1-617 IMKKKTKQDF QELIKTEHAL LEGFSIREST NYIEEHIDRQ VSPIESLRLM ENSTTRP00000012026/1-615 IMKKKTKQDF QELIKTEHAL LEGFSIREST NYIEEHIDRQ VSPIESLRLM ENSP00000327650/1-617 IMKKKTKQDF QELIKTEHAL LEGFNIREST SYIEEHIDRQ VSPIESLRLM ENSBTAP00000000029/1-617 IMKKKTKQDF QELIKTEHAL LEGFNIREST NYIEEHIDRQ VSPIESLRLM 451 500 BACU016075/1-1329 CLLSITENGL IPKDYRSLKT QYLQSYGPEH LLTFSNLRRA GLLTEQAPGD bmy_10336T0/1-617 CLLSITENGL IPKDYRSLKT QYLQSYGPEH LLTFSNLRRA GLLTEQAPGD ENSTTRP00000012026/1-615 CLLSITENGL IPKDYRSLKT QYLQSYGPEH LLTFSNLRRA GLLTEQAPGD ENSP00000327650/1-617 CLLSITENGL IPKDYRSLKT QYLQSYGPEH LLTFSNLRRA GLLTEQAPGD ENSBTAP00000000029/1-617 CLLSITENGL IPKDYRSLKT QYLQSYGPEH LLTFFNLRRA GLLTEQAPGD 501 550 BACU016075/1-1329 TLTAVESKVS KLVTDKAAGK ITDAFSSLAK RSNFRAISKK LNLIPRVDGE bmy_10336T0/1-617 TLTAVESKVS KLVTDKAAGK ITDAFSSLAK RSNFRAISKK LNLIPRVDGE ENSTTRP00000012026/1-615 TLTAVESKVS KLVTDKAAGK ITDAFSSLAK RSNFRAISKK LNLIPRVDGE ENSP00000327650/1-617 TLTAVESKVS KLVTDKAAGK ITDAFSSLAK RSNFRAISKK LNLIPRVDGE ENSBTAP00000000029/1-617 TLTAVESKVS KLVTDKAAGK ITDAFSSLAK RSNFRAISKK LNLIPRVDGE 551 600 BACU016075/1-1329 YDLKVPRDMA YVFSGAYVPL SCRIIEQVLE RQSWQGLDEV VRLLNCSELA bmy_10336T0/1-617 YDLKVPRDMA YVFSGAYVPL SCRIIEQVLE RQSWQGLDEV VRLLNCSELA ENSTTRP00000012026/1-615 YDLKVPRDMA YVFSGAYVPL SCRIIEQVLE RQSWQGLDEV VRLLNCSELA ENSP00000327650/1-617 YDLKVPRDMA YVFGGAYVPL SCRIIEQVLE RRSWQGLDEV VRLLNCSDFA ENSBTAP00000000029/1-617 YDLKVPRDMA YVFSGAYVPL SCRIIEQVLE RRGWQGLDEV VRLLNCSELA 601 650 BACU016075/1-1329 FTDMTKEDKA SSESLRLILV VFLGGCTFSE ISALRFLGRE KGHGFLHLGK bmy_10336T0/1-617 FTDMTKEDKA SSESLRLILV VFLGGCTFSE ISALRFLGRE KGYRFIFL-- ENSTTRP00000012026/1-615 FTDMTKEDKA SSESLRLILV VFLGGCTFSE ISALRFLGR- -GYRFIFL-- ENSP00000327650/1-617 FTDMTKEDKA SSESLRLILV VFLGGCTFSE ISALRFLGRE KGYRFIFL-- ENSBTAP00000000029/1-617 FTDMTKDDKA SSESLRLILV VFLGGCTFSE ISALRFLGRE KGYRFIFL-- 651 700 BACU016075/1-1329 LLGPQACCLN EQGKQIMAPG FSVNPSHVTL PAEGGKAVYA PRRGDPDTGR bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 701 750 BACU016075/1-1329 SLGADTHFES KPRRGRAELR GGCRLASEVL AEESIVCLQK ALNHLREIWE bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 751 800 BACU016075/1-1329 LIGIPEDQRL QRTEVVKKHI KDLLDRMIAE EEDLKERLIK SIAICQKELN bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 801 850 BACU016075/1-1329 TLCSELHVEP FQEEGETTIL QLEKDLRTQV ELMRKQKKER KQELKLLQEQ bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 851 900 BACU016075/1-1329 DQELCEILCT PHYDIDSTSV PSLGELSQFR QHVATLRETK ASRREEFVNI bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 901 950 BACU016075/1-1329 KRQIILCMEE LEHTPDTSFE RDVVCEDEDA FCLSLENIAT LQKLLRQLEM bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 951 1000 BACU016075/1-1329 RKSQNEAVCE GLRAQIRELW DRLQIPAEER EAVATVMTGS KAKVRKALQL bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 1001 1050 BACU016075/1-1329 EVDRLEELKM QNMKKVIEAI RVELAQYWDQ CFYSQEQRQA FAPYYSEDYT bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 1051 1100 BACU016075/1-1329 ENLLQLHDAE IVRLRNYYEV HKELFEGVQK WEESWKLFLE FERKASDPSR bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 1101 1150 BACU016075/1-1329 FTNRGGNLLK EEKQRAKLQK TLPKLEEELK ARIEMWEQEH SKAFVVNGQK bmy_10336T0/1-617 ---------- ---------- ---------- ---------- -TTAVTNSVR ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- -TTAVTNSVR ENSP00000327650/1-617 ---------- ---------- ---------- ---------- -TTAVTNSAR ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- -TTAVTNSAR 1151 1200 BACU016075/1-1329 FMEYVTEQWE MHRLEKERAK QERQLKNKKQ TETEMLYGST PRTPNKRRGL bmy_10336T0/1-617 LMEAMSE--- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 LMEAMSE--- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 LMEAMSE--- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 LMEAMSE--- ---------- ---------- ---------- ---------- 1201 1250 BACU016075/1-1329 APGTPGKVRK LNTTTVSNAT ANSSIRPVFS GTVCRSPVSR LPPSGSKPVT bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 1251 1300 BACU016075/1-1329 TSTCSGKKTP RGIKHGANKE NLELNGSIFS GGYPASAPPR RNFSINSVAS bmy_10336T0/1-617 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012026/1-615 ---------- ---------- ---------- ---------- ---------- ENSP00000327650/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000029/1-617 ---------- ---------- ---------- ---------- ---------- 1301 1350 BACU016075/1-1329 TYSEFARELS KASKSDATSR ILNSTNIQS bmy_10336T0/1-617 ---------- ---------- ------VKA ENSTTRP00000012026/1-615 ---------- ---------- ------VKA ENSP00000327650/1-617 ---------- ---------- ------VKA ENSBTAP00000000029/1-617 ---------- ---------- ------VKA