KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:11 2014 Check: 00 .. Name: bmy_06742T0/1-279 Len: 367 Check: 285 Weight: 1.00 Name: ENSP00000225941/1-366 Len: 367 Check: 2337 Weight: 1.00 Name: ENSBTAP00000000036/1-359 Len: 367 Check: 785 Weight: 1.00 Name: BACU006409/1-359 Len: 367 Check: 2615 Weight: 1.00 Name: ENSTTRP00000004368/1-357 Len: 367 Check: 9797 Weight: 1.00 // 1 50 bmy_06742T0/1-279 MAELQQLQEF EIPTGREALQ GNYSSLLRVA DYCEDNYV-- ---------- ENSP00000225941/1-366 MAELQQLQEF EIPTGREALR GNHSALLRVA DYCEDNYVQA TDKRKALEET ENSBTAP00000000036/1-359 MAELQQLQEF EIPTGREALR GNHSSLLRVA DYCEDNYVQA TDKRKALEET BACU006409/1-359 MAELQQLQEF EIPTGREALQ GNYSSLLRVA DYCEDNYVQA TDKRKALEET ENSTTRP00000004368/1-357 MAELQQLQEF EIPTGREALQ GNYSSLLRVA DYCEDNYVQA TDKRKALEET 51 100 bmy_06742T0/1-279 ---------- ---------- ---------- ---------- ----QMVNMH ENSP00000225941/1-366 MAFTTQALAS VAYQVGNLAG HTLRMLDLQG AALRQVEARV STLGQMVNMH ENSBTAP00000000036/1-359 MAFTTQALAS VAYQVGNLAG HTLRMLDLQA AALRQVEARV STLGQMVNMH BACU006409/1-359 MAFTTQALAS VAYQVGNLAG HTLRMLDLQA SALRQVEARV STLGQMVNMH ENSTTRP00000004368/1-357 MAFTTQALAS VAYQVGNLAG HTLRMLDLQA SALRQVEARV STLGQMVNMH 101 150 bmy_06742T0/1-279 MEKVARREIG TLATVQRLPP SQKIIAPESL PPLTPYYRRP LNFGCLDDIG ENSP00000225941/1-366 MEKVARREIG TLATVQRLPP GQKVIAPENL PPLTPYCRRP LNFGCLDDIG ENSBTAP00000000036/1-359 MEKVARREIG TLATVQRLPP GQKIIAPESL PHLTPYYRRP LNFSCLDDIG BACU006409/1-359 MEKVARREIG TLATVQRLPP GQKIIAPESL PPLTPYYRRP LNFCCLDDIG ENSTTRP00000004368/1-357 MEKVARREIG TLATVQRLPP SQKIIAPESL PPLTPYYRRP LNFGCLDDIG 151 200 bmy_06742T0/1-279 ----ERPGSP SLCSSPSCRT ANSPPPPLP- -----PPWPR PAERPL---- ENSP00000225941/1-366 HGIKDLSTQL SRTGTLSRKS IKAPATPASA TLGRPPRIPE PVHLPVVPDG ENSBTAP00000000036/1-359 HGIKDLSTQL SRTGTLSRKS IKAPATPASA TLGRAPRIPE PVQAPVVPDG BACU006409/1-359 HGVKDLSTQL SRTGTLSRKS IKAPATPGSA TLGRAPRIPE PVQLPVVPDG ENSTTRP00000004368/1-357 HGVKDLSTQL SRTGTLSRKS IKAPATPGST TLGRAPRIPE PVQLPMVPDG 201 250 bmy_06742T0/1-279 -----SLVFS -----SAEGV GGVSTTQEQA VPPP------ --PPPPPAAS ENSP00000225941/1-366 RLSAASSAFS LASAGSAEGV GGAPTPKGQA APPAPPLPSS LDPPPPPAAV ENSBTAP00000000036/1-359 RLSAASSASS LASAGSAEGV GGVSMTKGQA APHP------ --PPPPPAAP BACU006409/1-359 KLSAASSASS LASAGSAEGV GGVSTTQVQA VLPP------ --PPPPPAAS ENSTTRP00000004368/1-357 KLSAASSASS LASAGSAEG- -GVSTTQEQA VPPP------ --PPPPPAAS 251 300 bmy_06742T0/1-279 DGFLPPPPLG ELCLPPPAPE LPMPLDLPPP PPLDVDDLGL PPPPPPGFGP ENSP00000225941/1-366 EVFQRPPTLE ELSPPPPDEE LPLPLDLPPP PPLDGDELGL P-PPPPGFGP ENSBTAP00000000036/1-359 DFFLLPTSLE KLSLPPPAPE LPMPLDLPPP PPLDVDDLEL PPPPPPGFGS BACU006409/1-359 DGFLPPPPLG ELCLPPPAPE LPMPLDLPPP PPLDVDDLGL PPPPPPGFGP ENSTTRP00000004368/1-357 EGFLPPPPLG ELYLPPTAPE LPMPLDLPPP PPLDVDDLGL PPPPPPGFGP 301 350 bmy_06742T0/1-279 EEPSWVPDAY LEKVVTLYPY IRQKDNELSF SEGTVICITR RYSDGWCEGV ENSP00000225941/1-366 DEPSWVPASY LEKVVTLYPY TSQKDNELSF SEGTVICVTR RYSDGWCEGV ENSBTAP00000000036/1-359 EEPSWVPDAY LEKVVTLYPY TRQKDNELSF SEGTVICITR RYSDGWCEGV BACU006409/1-359 EEPSWVPDAY LEKVVTLYPY IRQKDNELSF SEGTVICITR RYSDGWCEGV ENSTTRP00000004368/1-357 EEPSWVPDAY LEKVVTLYPY TRQKDNELSF SEGTVICITR RYSDGWCEGV 351 400 bmy_06742T0/1-279 CSEGSGFFPG NYVEPSC ENSP00000225941/1-366 SSEGTGFFPG NYVEPSC ENSBTAP00000000036/1-359 CSEGSGFFPG NYVEPIS BACU006409/1-359 CSEGSGFFPG NYVEPSC ENSTTRP00000004368/1-357 CSEGSGFFPG NYVEPSC