KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:10:11 2014 Check: 00 .. Name: ENSTTRP00000011648/1-400 Len: 476 Check: 410 Weight: 1.00 Name: bmy_02247T0/1-411 Len: 476 Check: 7828 Weight: 1.00 Name: ENSP00000329466/1-400 Len: 476 Check: 2839 Weight: 1.00 Name: ENSBTAP00000000043/1-400 Len: 476 Check: 3926 Weight: 1.00 // 1 50 ENSTTRP00000011648/1-400 ---------- ---------- MAAGGXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02247T0/1-411 MCRRAACREA EAEARVSPGV MAAGGLSRSE RKAAERVRRL REEQQRERLR ENSP00000329466/1-400 ---------- ---------- MAAGGLSRSE RKAAERVRRL REEQQRERLR ENSBTAP00000000043/1-400 ---------- ---------- MAAGGLSRSE RKAAERVRRL REEQQRERLR 51 100 ENSTTRP00000011648/1-400 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXX--- bmy_02247T0/1-411 QVSRILRKAA AERSAEEGRL LAESEDLVTE LQGRSRRREG LKRRQEEASP ENSP00000329466/1-400 QVSRILRKAA AERSAEEGRL LAESADLVTE LQGRSRRREG LKRRQEE--- ENSBTAP00000000043/1-400 QVSRILRKAA TERSAEEGRL LAESEDLVTE LQGRSRRREG LKRRQEE--- 101 150 ENSTTRP00000011648/1-400 ---------- ---------- ------XXXX XXXXXXXXXX XXXXXXXXXX bmy_02247T0/1-411 GCGRAGRGPG RGRAGAGSRP ASASRQVCDD PEELRRKVRE LASAVRNAKH ENSP00000329466/1-400 ---------- ---------- ------VCDD PEELRGKVRE LASAVRNAKY ENSBTAP00000000043/1-400 ---------- ---------- ------VCDD PEELQRKVRE LASAVRNAKY 151 200 ENSTTRP00000011648/1-400 XXXXXXXXXX XAASIPDYRG PNGVWTLLQK GRSISAADLS EAEP------ bmy_02247T0/1-411 LVVYTGAGIS TAASIPDYRG PNGVWTLLQK GRSIRASESL GAGPVPSPPE ENSP00000329466/1-400 LVVYTGAGIS TAASIPDYRG PNGVWTLLQK GRSVSAADLS EAEP------ ENSBTAP00000000043/1-400 LVVYTGAGIS TAASIPDYRG PNGVWTLLQK GRSVSAADLS EAEP------ 201 250 ENSTTRP00000011648/1-400 ---------- TLTHMSITCL HE-------- ---QKLXXXX XXXXXXXXXX bmy_02247T0/1-411 PPESCWDQPA ALGLPSMLCA GSELPLVWGL WGGQGSVQHV VSQNCDGLHL ENSP00000329466/1-400 ---------- TLTHMSITRL HE-------- ---QKLVQHV VSQNCDGLHL ENSBTAP00000000043/1-400 ---------- TLTHMSITRL HE-------- ---QKLVQHV VSQNCDGLHL 251 300 ENSTTRP00000011648/1-400 XXXXXXXXXX XXXXXXXXXV CTACTPNREY VRVFDVTERT ALHRHQTGRT bmy_02247T0/1-411 RSGLPRTAMS ELHGNMYIEV CTACTPNREY VRVFDVTERT ALHRHQTGRT ENSP00000329466/1-400 RSGLPRTAIS ELHGNMYIEV CTSCVPNREY VRVFDVTERT ALHRHQTGRT ENSBTAP00000000043/1-400 RSGLPRSAMS ELHGNMYIEV CTACTPNREY VRVFDVTERT ALHRHQTGRT 301 350 ENSTTRP00000011648/1-400 CHKCGAQLRD TIVHFGERGT LGQPLNWEAA TQAASRADTI LCLGSSLKVL bmy_02247T0/1-411 CHKCGAQLRD TIVHFGERGT LGQPLNWEAA TQAASRADTI LCLGSSLKVL ENSP00000329466/1-400 CHKCGTQLRD TIVHFGERGT LGQPLNWEAA TEAASRADTI LCLGSSLKVL ENSBTAP00000000043/1-400 CHKCGGQLRD TIVHFGERGT LGQPLNWEAA TEAASKADTI LCLGSSLKVL 351 400 ENSTTRP00000011648/1-400 KKYPHLWCMT KPPSRRPKLY IVNLQWTPKD DWAALKLHGK CDDVMRLLMD bmy_02247T0/1-411 KKYPHLWCMT KPPSRRPKLY IVNLQWTPKD DWAALKLHGK CDDVMRLLMD ENSP00000329466/1-400 KKYPRLWCMT KPPSRRPKLY IVNLQWTPKD DWAALKLHGK CDDVMRLLMA ENSBTAP00000000043/1-400 KKYPHLWCMT KPPSRRPKLY IVNLQWTPKD DWAALKLHGK CDDVMQLLMD 401 450 ENSTTRP00000011648/1-400 ELGLEIPRYS RWQDPIFSLA TPLRAGEEGS HSRKSLCRSR EEPGPGDRGA bmy_02247T0/1-411 ELGLEIPRYS R--------- ---------- ---------- ---------- ENSP00000329466/1-400 ELGLEIPAYS RWQDPIFSLA TPLRAGEEGS HSRKSLCRSR EEAPPGDRGA ENSBTAP00000000043/1-400 ELGLEIPRYS RWQDPIFSLA TPLRAGEEGS HSRKSLCRSR EEPGPGDRGA 451 500 ENSTTRP00000011648/1-400 PLSSAPVLGG WFGRGCTKRT KRKKVT bmy_02247T0/1-411 ---------- ---------- ------ ENSP00000329466/1-400 PLSSAPILGG WFGRGCTKRT KRKKVT ENSBTAP00000000043/1-400 PLSSAPILGG WFGRGCTKRT KRKKVT