KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:10:20 2014  Check: 00 ..

 Name: ENSTTRP00000015431/1-155  Len:    221  Check:  2785  Weight:  1.00
 Name: ENSP00000367196/1-154     Len:    221  Check:  6321  Weight:  1.00
 Name: bmy_02861T0/1-221         Len:    221  Check:  8264  Weight:  1.00
 Name: ENSBTAP00000000086/1-154  Len:    221  Check:  6511  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000015431/1-155  MGKL------ ---------- ---------- ---------- ---------- 
ENSP00000367196/1-154     MGKS------ ---------- ---------- ---------- ---------- 
bmy_02861T0/1-221         MGKSAPLHPY PVPDSVRLHT AANNGFPFLS DLSRPILTTV AVPVKSRHSL 
ENSBTAP00000000086/1-154  MGKS------ ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSTTRP00000015431/1-155  ---------- ---------- XXSKQFNDEV LKAHNEYRKQ HGVAPLKLCK 
ENSP00000367196/1-154     ---------- ---------- -ASKQFHNEV LKAHNEYRQK HGVPPLKLCK 
bmy_02861T0/1-221         TPSIPLSAAL RAVSLHLEII AASKQFNDEV LKAHNEYRKQ HGVAPLKLCK 
ENSBTAP00000000086/1-154  ---------- ---------- -ASKQFNDEV LKAHNEYRKQ HGVPPLKLCK 


                          101                                                150
ENSTTRP00000015431/1-155  KLNREAQQYS EALASTRILK HSPESSRGQC GENLAWASYD QTXXXXXXXX 
ENSP00000367196/1-154     NLNREAQQYS EALASTRILK HSPESSRGQC GENLAWASYD QTGKEVADRW 
bmy_02861T0/1-221         KLNREAQQYS EALASTRILK HSPESSRGQC GENLAWASYD QTGKEVADRW 
ENSBTAP00000000086/1-154  KLNREAQQYS EALASTRILK HSPESSRGQC GENLAWASYD QTGKEVADRW 


                          151                                                200
ENSTTRP00000015431/1-155  XXXIKNYNFQ QPGFTSGTGH FTAMVWKNTK KMGVGKASAG DGSSFVVARY 
ENSP00000367196/1-154     YSEIKNYNFQ QPGFTSGTGH FTAMVWKNTK KMGVGKASAS DGSSFVVARY 
bmy_02861T0/1-221         YSEIKNYNFQ QPGFTSGTGH FTAMVWKNTK KMGVGKASAS DGSSFVVARY 
ENSBTAP00000000086/1-154  YSEIKNYNFQ QPGFTSGTGH FTAMVWKNTK KMGVGKASAS DGSSFVVARY 


                          201                                                250
ENSTTRP00000015431/1-155  FPAGNVVNQG FFEENVLPPK K 
ENSP00000367196/1-154     FPAGNVVNEG FFEENVLPPK K 
bmy_02861T0/1-221         FPAGNVVNQG FFEENVLPPK K 
ENSBTAP00000000086/1-154  FPAGNVVNQG FFEENVLPPK K