KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:24 2014 Check: 00 .. Name: ENSTTRP00000011300/1-325 Len: 353 Check: 1317 Weight: 1.00 Name: bmy_07205T0/1-339 Len: 353 Check: 5463 Weight: 1.00 Name: BACU019874/1-306 Len: 353 Check: 6252 Weight: 1.00 Name: ENSBTAP00000000104/1-323 Len: 353 Check: 143 Weight: 1.00 Name: ENSP00000460964/1-351 Len: 353 Check: 3330 Weight: 1.00 // 1 50 ENSTTRP00000011300/1-325 ---------- ---------- -----MAAVV AAAGGAGPAV LQVAGLYRGL bmy_07205T0/1-339 MEWARGPRAE ADAPGEEEDE EAGAAMAAVV AAAGGAGPAV LQVAGLYRGL BACU019874/1-306 ---------- ---------- ---------- ---------- ----GIYRGL ENSBTAP00000000104/1-323 ---------- ---------- -----MAAVV AAAGGAGPAV LQVAGLYRGL ENSP00000460964/1-351 MERARGPRAE ADAP-EEEEE AGAAMAAVVV AAAGGAGPAV LQVAGLYRGL 51 100 ENSTTRP00000011300/1-325 CAVRSRALGL GLVSPAQLRV FPVRRGSGRP AGGVESSGVG --KEIEANPF bmy_07205T0/1-339 CAVRSRALGL GLVSPAQLRV FPVRRGSGRP AGGAEGSGVG --NEIEANPF BACU019874/1-306 CAVRSRALGL GLVSPAQLRV FPVRPGSGRP AGGAEGSGVE --NEIEANPF ENSBTAP00000000104/1-323 CAVRSRALGL GLVSAAQLRV FPVRRSSGRP AGGADGSAVG --DELEANPF ENSP00000460964/1-351 CAVRSRALGL GLVSPAQLRV FPVRPGSGRP EGGADSSGVG AEAELQANPF 101 150 ENSTTRP00000011300/1-325 YDRYRDKIQQ LRRSDPT-AF ESRLEKCSEF RKQPVGHSKQ GDFIKCVEQK bmy_07205T0/1-339 YDRYRDKIQQ LRSMILTXAF ESRLEKCSEF RKQPVGHSKQ GDFIKCVEQK BACU019874/1-306 YDRYRDKIQQ LGRSDPT-AF ESRLEKCSEF LKQPVGHSKQ GDFIKCVEQK ENSBTAP00000000104/1-323 YDRYRDKIQQ LRRSDPA-AF ESRLEKRSEF RKQPVGHSRQ GDFIKCVEQK ENSP00000460964/1-351 YDRYRDKIQL LRRSDPA-AF ESRLEKRSEF RKQPVGHSRQ GDFIKCVEQK 151 200 ENSTTRP00000011300/1-325 TDTLEKQRMS RGFTKDKTLS SIFNIEMVKD KTAEEIKQXX XXXXXXXXXX bmy_07205T0/1-339 TDTLGKQRMS RGFTKDKTLS SIFNIEMVKD KTAEEIKQIW QLYFAAKDTV BACU019874/1-306 TDTLGKQHMS RGFTKDKTLS SIFNIEMVKD KTAEEIKQIW QQYFAAKDTV ENSBTAP00000000104/1-323 T--LGKQPVS RGFTKDKTLS SIFNIEMVKG KTAEEIKQIW QQYFAAKDTV ENSP00000460964/1-351 TDALGKQSVN RGFTKDKTLS SIFNIEMVKE KTAEEIKQIW QQYFAAKDTV 201 250 ENSTTRP00000011300/1-325 XXXXXKEKFD LIWNRAQSCP TFLCALPRRE GYEFFVGQWT GTELHFTALI bmy_07205T0/1-339 YAVIPKEKFD LIWNRAQSCP TFLCALPRRE GYEFFVGQWT GTELHFTALI BACU019874/1-306 YAVIPKEKFD LIWNRAQSCP TFLCALPRRE GYEFFVGQWA GTELHFTALI ENSBTAP00000000104/1-323 YAVIPKEKFD LIWNRAQSCP TFLCALPRRE GYEFFVGQWT GTELHFTALI ENSP00000460964/1-351 YAVIPAEKFD LIWNRAQSCP TFLCALPRRE GYEFFVGQWT GTELHFTALI 251 300 ENSTTRP00000011300/1-325 NIQTRGEAAA SQLILYHYPE LKEEKGIVLM TAEMDSTFLN VAEAQCIANQ bmy_07205T0/1-339 NIQTRGEAAA SQLILYHYPE LKEEKGI--- ---------N VAEAQCIANQ BACU019874/1-306 NIQTRGEAAA SQLILYHYPE LKEEKGIVLM TAEMDSTFLN VAEAQCIANQ ENSBTAP00000000104/1-323 NIQTRGEAAA SQLILYHYPE LKEEKGIVLM TAEMDSTFLS VAEAQCMANQ ENSP00000460964/1-351 NIQTRGEAAA SQLILYHYPE LKEEKGIVLM TAEMDSTFLN VAEAQCIANQ 301 350 ENSTTRP00000011300/1-325 VQLFYATDRK ETYGLVETFN FRPNEFKYMS VIAELEQSGL GAELKCSQNQ bmy_07205T0/1-339 VQLFYATDRR ETYGLVEXFN FRPNEFKYMS VIAELEQSGL GAELKCSQNQ BACU019874/1-306 VQLFYATDRR ETYGLVETFN FRPNEFKYMS VIAELEQSGL GAELKCSQNQ ENSBTAP00000000104/1-323 VQLFYATDRK ETYGLVETFN FRPNEFKYMS VIAELEQSGL GAELKCSQNQ ENSP00000460964/1-351 VQLFYATDRK ETYGLVETFN LRPNEFKYMS VIAELEQSGL GAELKCAQNQ 351 400 ENSTTRP00000011300/1-325 DKT bmy_07205T0/1-339 DKT BACU019874/1-306 DKT ENSBTAP00000000104/1-323 NKT ENSP00000460964/1-351 NKT