KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:26 2014 Check: 00 .. Name: ENSBTAP00000000109/1-380 Len: 406 Check: 6848 Weight: 1.00 Name: ENSP00000271688/1-380 Len: 406 Check: 7326 Weight: 1.00 Name: ENSTTRP00000006601/1-399 Len: 406 Check: 2204 Weight: 1.00 Name: bmy_11135T0/1-387 Len: 406 Check: 7514 Weight: 1.00 Name: BACU019250/1-383 Len: 406 Check: 6944 Weight: 1.00 // 1 50 ENSBTAP00000000109/1-380 ---------- ---------M LQTLHDYFWW ERLWLPVNLT WADLEDRDGR ENSP00000271688/1-380 ---------- ---------M LQTLYDYFWW ERLWLPVNLT WADLEDRDGR ENSTTRP00000006601/1-399 PLALNLNGGE VGLQEIAVRM LQTLYDHFWW ERLWLPVNLT WADLEDRDGR bmy_11135T0/1-387 ---------- ---------M LQTLYDYFWW ERLWLPVNLT WADLEDRDGR BACU019250/1-383 ---------- ------SLRM LQTLYDYFWW ERLWLPVNLT WADLEDRDGR 51 100 ENSBTAP00000000109/1-380 VYAKASDLYI TLPLALLFLI IRYFFELYVA TPLAALLNVK EKTRLRAPPN ENSP00000271688/1-380 VYAKASDLYI TLPLALLFLI VRYFFELYVA TPLAALLNIK EKTRLRAPPN ENSTTRP00000006601/1-399 VYAKASDLYI TLPLALLFLI IRYFFELYVA TPLAALLNVK EKTRLRAPLN bmy_11135T0/1-387 VYAKASDLYI TLPLALLFLI IRYFFELYVA TPLAALLNVK EKTRLRAPLN BACU019250/1-383 VYAKASDLYI TLPLALLFLI VRYFFELYVA TPLAALLNVK EKTRLRAPLN 101 150 ENSBTAP00000000109/1-380 PTLEHFYMTS GKQPKQADVE LLSRQSGLSG RQVERWFRRR RNQDRPSLLK ENSP00000271688/1-380 ATLEHFYLTS GKQPKQVEVE LLSRQSGLSG RQVERWFRRR RNQDRPSLLK ENSTTRP00000006601/1-399 PTLEHFYLTS GKQPKQAEVE LLSRQSGLSG RQVERWFRRR RNQDRPSLLK bmy_11135T0/1-387 PTLEHFYLTS GKQPKQAEVE LLSRQSGLSG RQVERWFRRR RNQDRPSLLK BACU019250/1-383 PTLEHFYLTS GKQPKQAEVE LLSRQSGLSG RQVERWFRRR RNQDRPSLLK 151 200 ENSBTAP00000000109/1-380 KFREASWRFT FYLIAFIAGT AVIVD----- --KPWFYDLR KVWEGYPIQS ENSP00000271688/1-380 KFREASWRFT FYLIAFIAGM AVIVD----- --KPWFYDMK KVWEGYPIQS ENSTTRP00000006601/1-399 KFREASWRFT FYLIAFIAGM AVIVD----- --KPWFYDMR KVWEGYPIQS bmy_11135T0/1-387 KFREASWRFT FYLIAFIAGM AVIVDVSGDS WEKPWFYDMR KVWEGYPIQS BACU019250/1-383 KFREASWRFT FYLIAFIAGM AVIVD----- --KPWFYDMR KVWEGYPIQS 201 250 ENSBTAP00000000109/1-380 IIPSQYWYYM IELSFYWSLL FSIASDVKRK DFKEQIIHHV ATIILISFSW ENSP00000271688/1-380 TIPSQYWYYM IELSFYWSLL FSIASDVKRK DFKEQIIHHV ATIILISFSW ENSTTRP00000006601/1-399 VIPSQYWYYM IELSFYWSLL FSIASDVKRK DFKEQIIHHV ATIILISFSW bmy_11135T0/1-387 LIPSQYWYYM IELSFYWSLL FSIASDVKRK DFKEQIIHHV ATIILISFSW BACU019250/1-383 LIPSQYWYYM IELSFYWSLL FSIASDVKRK DFKEQIIHHV ATIILISFSW 251 300 ENSBTAP00000000109/1-380 FANYVRAGTL IMALHDSSDY LLESAKMFNY AGWKNTCNNI FIVFAIVFII ENSP00000271688/1-380 FANYIRAGTL IMALHDSSDY LLESAKMFNY AGWKNTCNNI FIVFAIVFII ENSTTRP00000006601/1-399 FANYVRAGTL IMALHDSSDY LLESAKMFNY AGWKNTCNNI FIVFAIVFII bmy_11135T0/1-387 FASYIRAGTL IMALHDSSDY LLESAKMFNY AGWKNTCNNI FIVFAIVFII BACU019250/1-383 FASYVRAGTL IMALHDSSDY LLESAKMFNY AGWKNTCNNI FIVFAIVFII 301 350 ENSBTAP00000000109/1-380 TRLVILPFWI LHCTLVYPLE LYPAFFGYYF FNFMMGVLQL LHIFWAYLIL ENSP00000271688/1-380 TRLVILPFWI LHCTLVYPLE LYPAFFGYYF FNSMMGVLQL LHIFWAYLIL ENSTTRP00000006601/1-399 TRLVILPFWI LHCTLVYPLE LYPAFFGYYF FNFMMGVLQL LHIFWAYLIL bmy_11135T0/1-387 TRLVILPFWI LHCTLVYPLE LYPAFFGYYF FNFMMGVLQL LHIFWAYLIL BACU019250/1-383 TRLVILPFWI LHCTLVYPLE LYPAFFGYYF FNFMMGVLQL LHIFWAYLIL 351 400 ENSBTAP00000000109/1-380 RMAHKFITGK VVEDERSDRE ETESSEGEEA AAGGGAKNRP LANGHPILNN ENSP00000271688/1-380 RMAHKFITGK LVEDERSDRE ETESSEGEEA AAGGGAKSRP LANGHPILNN ENSTTRP00000006601/1-399 RMAHKFITGK LVEDERSDRE ETESSEGEEA AAGGGAKSRP LANGHPILNN bmy_11135T0/1-387 RMAHKFITGK LVEDERSDRE ETESSEGEEA AAGGGAKSRP LANGHPILNN BACU019250/1-383 RMAHKFITGK LVEDERSDRE ETESSEGEEA AAGGGAKSRP LANGHPILNN 401 450 ENSBTAP00000000109/1-380 NHRKND ENSP00000271688/1-380 NHRKND ENSTTRP00000006601/1-399 NHRKND bmy_11135T0/1-387 NHRKND BACU019250/1-383 NHRKND