KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:26 2014 Check: 00 .. Name: ENSP00000378195/1-540 Len: 540 Check: 5871 Weight: 1.00 Name: bmy_12135T0/1-467 Len: 540 Check: 7025 Weight: 1.00 Name: ENSBTAP00000000111/1-540 Len: 540 Check: 7536 Weight: 1.00 Name: BACU013870/1-540 Len: 540 Check: 4579 Weight: 1.00 Name: ENSTTRP00000006914/1-540 Len: 540 Check: 5416 Weight: 1.00 // 1 50 ENSP00000378195/1-540 MNSTGHLQDA PNATSLHVPH SQEGNSTSLQ EGLQDLIHTA TLVTCTFLLA bmy_12135T0/1-467 ---------- --MAMMPLAL HPPGRRAELG SGLR------ ---------- ENSBTAP00000000111/1-540 MNSTGHLQDV PNTTLLHVPH AQGGNSTSIQ EGLQEPVHTA TLVTCTFLLA BACU013870/1-540 MNSTDLPQDA PNTTLLRVPH SQGGNSTALQ EDLQDLIHTA TLASCTFLLA ENSTTRP00000006914/1-540 MNSTDLPQDA PNTTLLHVPH SQGENSTAVQ EDLQDLIHTA TLVSCTFLLA 51 100 ENSP00000378195/1-540 VIFCLGSYGN FIVFLSFFDP AFRKFRTNFD FMILNLSFCD LFICGVTAPM bmy_12135T0/1-467 -------YGG GVAALR--PP G--------- ---------- ---------- ENSBTAP00000000111/1-540 VIFCLGSYGN FIVFLSFFDP AFRKFRTNFD FMILNLSFCD LFICGVTAPM BACU013870/1-540 IIFCLGSYGN FIVFLSFFDP AFRKFRTNFD FMVLNLSFCD LFICGVTAPM ENSTTRP00000006914/1-540 IIFCLGSYGN FIVFLSFFDP AFRKFRTNFD FMVLNLSFCD LFICGVTAPM 101 150 ENSP00000378195/1-540 FTFVLFFSSA SSIPDAFCFT FHLTSSGFII MSLKTVAVIA LHRLRMVLGK bmy_12135T0/1-467 -------SSA SGIPDAFCFT FHLTSSGFII MSLKTVAVIA LHRLRMVLGK ENSBTAP00000000111/1-540 FTFVLFFSSA SGIPDTFCFT FHLTSSGFII MSLKTVAVIA LHRLRMVLGK BACU013870/1-540 FTFVLFFSSA SGIPDAFCFT FHLTSSGFII MSLKTVAVIA LHRLRMVLGK ENSTTRP00000006914/1-540 FTFVLFFSSA SGIPDAFCFT FHLTSSGFII MSLKTVAVIA LHRLRMVLGK 151 200 ENSP00000378195/1-540 QPNRTASFPC TVLLTLLLWA TSFTLATLAT LKTSKSHLCL PMSSLIAGKG bmy_12135T0/1-467 QPNRTASFLC TLLLTLLLWA TSFTLATLAT LKTSNSRLCL PMSSLIAREG ENSBTAP00000000111/1-540 QPNRTASFPC TLLLTLLLWT TSFTLATLAT LKTSKSHLCL PMSSLIAGEG BACU013870/1-540 QPNRTASFLC TLLLTLLLWA TSFTLATLAT LKTSNSHLCL PMSSLIAREG ENSTTRP00000006914/1-540 QPNRTASFLC TLLLTLLLWA TSFTLATLAT LKTSKSHLCL PMSSLIAREG 201 250 ENSP00000378195/1-540 KAILSLYVVD FTFCVAVVSV SYIMIAQTLR KNAQVRKCPP VITVDASRPQ bmy_12135T0/1-467 KAILSLYVVD FTFCVAVVSV SYIMIAQTLR KNAQVRKCPP VITVDASRPQ ENSBTAP00000000111/1-540 KAILSLYVVD FTFCVAVVFV SYVMIAQTLR KNAQVRKCPA VITVDASRPQ BACU013870/1-540 KAILSLYVVD FTFCVAVVSV SYIMIAQTLR KNAQVRKCPP VITVDASRPQ ENSTTRP00000006914/1-540 KAILSLYVVD FTFCVAVVSV SYIMIAQTLR KNAQVRKCPP VITVDASRPQ 251 300 ENSP00000378195/1-540 PFMGVPVQGG GDPIQCAMPA LYRNQNYNKL QHVQTRGYTK SPNQLVTPAA bmy_12135T0/1-467 PFMGAPVKGG GDPIQCTMPA LYRNQNYNKL QPVQTHGYTK SPNQLPTPAA ENSBTAP00000000111/1-540 PFMGAPVKGG GEPIQCTMPA LYRNQNYNKL QHVQTHGYTK SPNQLPTPAA BACU013870/1-540 PFMGAPVKGG GDPIQCTMPA LYRNQNYNKL QHVQTHGYTK SPNQLPTPAA ENSTTRP00000006914/1-540 PFMGAPVKGG GDPIQCTMPA LYRNQNYNKL QHVQTHGYTK SPNQLATPAA 301 350 ENSP00000378195/1-540 SRLQLVSAIN LSTAKDSKAV VTCVIIVLSV LVCCLPLGIS LVQVVLSSNG bmy_12135T0/1-467 SRLQLVSAVN LSTAKDSKAV VTCVIIVLSV LVCCLPLGIS LVQVVLSSRG ENSBTAP00000000111/1-540 SRLQLVSAVN LSTAQDSRAV VTCVIIVLSV LVCCLPLGIS LVQVVLSSNG BACU013870/1-540 SRLQLVSAVN LSTAKDSKAV VTCVIIVLSV LVCCLPLGIS LVQVVLSSSG ENSTTRP00000006914/1-540 SRLQLVSAVN LSTAKDSKAV VTCVIIVLSV LVCCLPLGIS LVHVVLSSNG 351 400 ENSP00000378195/1-540 SFILYQFELF GFTLIFFKSG LNPFIYSRNS AGLRRKVLWC LQYIGLGFFC bmy_12135T0/1-467 SFILYQFELF GFTLVFFKSG LNPFIYSRNS AGLRRKVLWC LQYIGLGFFC ENSBTAP00000000111/1-540 SFILYQFELL GFTLIFLKSG LNPFIYSRNS AGLRRKVLWC LQYIGLGFFC BACU013870/1-540 SFILYQFELF GFTLVFFKSG LNPFIYSRNS AGLRRKVLWC LQYIGLGFFC ENSTTRP00000006914/1-540 SFILYQFELF GFTLVFFKSG LNPFIYSRNS AGLRRKVLWC LQYIGLGFFC 401 450 ENSP00000378195/1-540 CKQKTRLRAM GKGNLEVNRN KSSHHETNSA YMLSPKPQKK FVDQACGPSH bmy_12135T0/1-467 CKQKTRLRAM GKGNLEVNRN KSSHHETNSA YMLSPKPQKK FVDQACGPSH ENSBTAP00000000111/1-540 CKQKTRLRAM GKGNLEVNRN KSSHHETNSA YMLSPKPQKK FVDQACGPSH BACU013870/1-540 CKQKTRLRAM GKGNLEVNRN KSSHHETNSA YVLSPKPQKK FVDQACGPSH ENSTTRP00000006914/1-540 CKQKTRLRAM GKGNLEVNRN KSSHHETNSA YMLSPKPQKK FVDQACGPSH 451 500 ENSP00000378195/1-540 SKESMVSPKI SAGHQHCGQS SSTPINTRIE PYYSIYNSSP SQEESSPCNL bmy_12135T0/1-467 SKESVVSPKM SAGHQHYGQS SSTPINTRIE PYYSIYNSSP SQEESIPHNL ENSBTAP00000000111/1-540 SKESVVSPKM SAGHQHYGQS SSTPINTRIE PYYSIYNSSP SQEESIPHNL BACU013870/1-540 SKESVVSPKM SAGHQHYGQS SSTPINTRIE PYYSIYNSSP SQEESIPHNL ENSTTRP00000006914/1-540 SKESVVSPKM SAGHQHYGQS SSTPINTRIE PYYSIYNSSP SQEESIPHNL 501 550 ENSP00000378195/1-540 QPVNSFGFAN SYIAMHYHTT NDLVQEYDST SAKQIPVPSV bmy_12135T0/1-467 QPVNSFGFAN SYIAMHYHTT NDLMQEYDST SAKQIPVPSV ENSBTAP00000000111/1-540 QPVNSFGFAN SYIAMHYHTT NDLMQEYDST SAKQIPVPSV BACU013870/1-540 QPVNSFGFAN SYIAMHYHTT NDLMQEYDST SAKQIPVPSV ENSTTRP00000006914/1-540 QPVNSFGFAS SYIAMHYHTT NDLMQEYDST SARQIPVPSV