KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:27 2014 Check: 00 .. Name: BACU004408/1-129 Len: 525 Check: 6828 Weight: 1.00 Name: ENSP00000344331/1-419 Len: 525 Check: 6978 Weight: 1.00 Name: ENSBTAP00000000115/1-451 Len: 525 Check: 6937 Weight: 1.00 Name: bmy_02526T0/1-483 Len: 525 Check: 7866 Weight: 1.00 Name: ENSTTRP00000014494/1-264 Len: 525 Check: 7159 Weight: 1.00 // 1 50 BACU004408/1-129 ---------- ---------- ---------- ---------- ---------- ENSP00000344331/1-419 MARAAGARGP AGWCRRRGRC GRGT------ LLAFAAWTAG W--------- ENSBTAP00000000115/1-451 RARAAGARGR PGRCGLGGRC GLGGRCGRRA LLACAAWTAG W--------- bmy_02526T0/1-483 -MANVHPDDP AVTQGVHGTH AFGSCSPDMF LLMISIATQI FTRLTSNNLV ENSTTRP00000014494/1-264 ---------- ---------- ---------- ---------- ---------- 51 100 BACU004408/1-129 ---------- ---------- ---------- ---------- ---------- ENSP00000344331/1-419 ---------- ---------- ---------- ----VLAAAL LLRAHP---- ENSBTAP00000000115/1-451 ---------- ---------- ---------- ----VLAAAL LLRAHP---- bmy_02526T0/1-483 RRISSQNYQY FQDAYLAKAV GSPDFSNLDP PELRAFCFHL LVKGTPLTGP ENSTTRP00000014494/1-264 ---------- ---------- ---------- ---------- ---------- 101 150 BACU004408/1-129 ---------- ---------- ---------- ---------- ---------- ENSP00000344331/1-419 ---------- ---------G VLSERCTDEK SRRILAALCQ DYQGGTLAGD ENSBTAP00000000115/1-451 ---------- ---------G VPSERCTDEK SRRILAALCQ DYRGGALGGD bmy_02526T0/1-483 SSELGANLVW VRFEFDFIDT VQFRRKHHGV GSQRGQGMCQ DYRGGALGGD ENSTTRP00000014494/1-264 ---------- ---------- ---------- ---------- ---------- 151 200 BACU004408/1-129 ---------- ---------- ---------- ---------- ---------- ENSP00000344331/1-419 LCEDLCVAGE LLFQRCLHYN RGKKVLQADW RGRPVVLKSK EEAFSSFPPL ENSBTAP00000000115/1-451 LCEDLCEAGQ LRYRRCLYYE RGKKVLQADW RGRPVVLKSK EEAFSSFPPL bmy_02526T0/1-483 LCEDLCVAGQ LRYRRCLYYE RGKKVLQADW RGRPVVLKSK EEAFASFPPL ENSTTRP00000014494/1-264 ---------- ---------- ---------- ---------- ---------- 201 250 BACU004408/1-129 ---------- ---------- ---------- ---------- ---------- ENSP00000344331/1-419 SLLEEEAGEG GQDMPEAELL LMVAGEVKSA LGLELSNSSL GPWWPGRRGP ENSBTAP00000000115/1-451 GLLDGQPEAG GQDLPEAELL VLAAGEARSA LGLEPAEGGL SRLELVRRGP bmy_02526T0/1-483 GLLDGQPEAG GPGFPEAELL LLAAAEVKSA LGLELAEGGL GRLGLGRRGP ENSTTRP00000014494/1-264 ---------- ---------- -LAAGEVKSA LGLELAEGGL GRLGLGRRGP 251 300 BACU004408/1-129 ---------- ---------- ---------- ---------- ---------- ENSP00000344331/1-419 RWRGQLASLW ALLQQEEYVY FSLLQDLSPH VLPVLGSCGH FYAVEFLAAG ENSBTAP00000000115/1-451 PRRGQLASLW ALLQQEEFVL LSLLRGRSPH APPVLGSCGH FYAVEHLAAG bmy_02526T0/1-483 RLRGQLASLW ALLQQEEFVL LSLLRGRSPH APPVLGSCGH FYAVEHLAAG ENSTTRP00000014494/1-264 RLRGQLASLW ALLQQEEFVL LSLLRGRSAH APPVLGSCGH FYTVKHLAAG 301 350 BACU004408/1-129 ---------- ---------- ---------- ----MVRHFE HDFSHRLHLC ENSP00000344331/1-419 SPHHRALFPL DRAPGAPGGG QAKAISDIAL SFLDMVNHFD SDFSHRLHLC ENSBTAP00000000115/1-451 SPGHRALFPL --GPDGGRRG QARAVSGVAL SFLDMVRHFD HDFAHRLHLC bmy_02526T0/1-483 SPRLRALFPL D-GAARGGRA QARALSGVAL SFLDMVRHFE HDFSHRLHLC ENSTTRP00000014494/1-264 SPRLRALFLL ERXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXIC 351 400 BACU004408/1-129 DVKPENFAIR SDFTVVAIDV DMAFFEPKMR EILEQNCTGD EDCNFFDCFS ENSP00000344331/1-419 DIKPENFAIR SDFTVVAIDV DMAFFEPKMR EILEQNCTGD EDCNFFDCFS ENSBTAP00000000115/1-451 DVKPENFAIR SDFTVVAIDV DMAFFEPKMR EILEQNCTRD EDCNFFDCFS bmy_02526T0/1-483 DVKPENFAIR SDFTVVAIDV DMAFFEPKMR EILEQNCTGD EDCNFFDCFS ENSTTRP00000014494/1-264 DV-PENFAIR SDFTVVAIDV DMAFFEPKMR EILEQNCTGD EDCNFFDCFS 401 450 BACU004408/1-129 KCDLRVHRCG AQRTNSNLQV SNAAVL---- -SGGGGPC-- -PLCGGILFS ENSP00000344331/1-419 RCDLRVNKCG AQRVNNNLQV ICDKIFRHWF SAPLKSSAVS FQLQLQLQEA ENSBTAP00000000115/1-451 KCDLRAHRCG AQRANSNLQV VCDKIFRHWF SSSRGSSAVS SPLRGQLRAA bmy_02526T0/1-483 KCDLRVHRCG AQRTNSNLQV VCDKILRHWF SSPRGSPAVS APLRRQLRAA ENSTTRP00000014494/1-264 KCDLRVHRCG AQRTNSNLQV VCDKILRHWF SSPRGSPAVS APLRRQLRAA 451 500 BACU004408/1-129 L--------- GGDP------ VLSGCLCLPH CDIPVM---- ---------- ENSP00000344331/1-419 VQECADPGVP SGNTRRAASS VFWKLRQLLQ ATLRELQEAE K--------- ENSBTAP00000000115/1-451 VQECAAPGAQ GA-PR----- VLGRLRSLLQ AVLRELRDGE ELRPGARSHP bmy_02526T0/1-483 VLECAAPGAQ GAAPR----- VLAKLRRLLQ AALRELQEDE ---------- ENSTTRP00000014494/1-264 VLECAAPGAQ GAAPR----- VLAKLRRLLQ AALRELREDE P--------- 501 550 BACU004408/1-129 ---------- ---------- ----- ENSP00000344331/1-419 ---------- ---------- ----- ENSBTAP00000000115/1-451 RGDSHHGTPG AARKAPAGLS HHPFE bmy_02526T0/1-483 ---------- ---------- ----- ENSTTRP00000014494/1-264 ---------- ---------- -----