KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:10:27 2014 Check: 00 .. Name: ENSBTAP00000000119/1-510 Len: 614 Check: 4169 Weight: 1.00 Name: ENSP00000357304/1-614 Len: 614 Check: 4162 Weight: 1.00 Name: bmy_03397T0/1-614 Len: 614 Check: 4327 Weight: 1.00 Name: ENSTTRP00000012655/1-610 Len: 614 Check: 265 Weight: 1.00 // 1 50 ENSBTAP00000000119/1-510 MSAGSATHPG AGGRRSKWDQ PAPAPLLFLP PATPGGEVTS SGGSPGGSTA ENSP00000357304/1-614 MSAGSATHPG AGGRRSKWDQ PAPAPLLFLP PAAPGGEVTS SGGSPGGTTA bmy_03397T0/1-614 MSAGSATHPG AGGRRSKWDQ PAPAPLLFLP PATPGGEVTS GGGSPGGSTA ENSTTRP00000012655/1-610 MSAGSATHPG AGGRRSKWDQ PAPAPLLFLP PATPGGEVTS GGGSPGGSTA 51 100 ENSBTAP00000000119/1-510 APSGALDAAA AVAAKINAML MAKGKLKPTQ NAAEKLQAPG KGLTSNKSKD ENSP00000357304/1-614 APSGALDAAA AVAAKINAML MAKGKLKPTQ NASEKLQAPG KGLTSNKSKD bmy_03397T0/1-614 APSGALDAAA AVAAKINAML MAKGKLKPTQ NAAEKLQAPG KGLSSNKSKD ENSTTRP00000012655/1-610 APSGALDAAA AVAAKINAML MAKGKLKPTQ NAAEKLQAPG KGLTSNKSKD 101 150 ENSBTAP00000000119/1-510 DLVVAEVEIN DVPLTCRNLL TRGQTQDEIS RLSGAAVSTR GRFMTTEEKA ENSP00000357304/1-614 DLVVAEVEIN DVPLTCRNLL TRGQTQDEIS RLSGAAVSTR GRFMTTEEKA bmy_03397T0/1-614 DLVVAEVEIN DVPLTCRNLL TRGQTQDEIS RLSGAAVSTR GRFMTTEEKA ENSTTRP00000012655/1-610 DLVVAEVEIN DVPLTCRNLL TRGQTQDEIS RLSGAAVSTR GRFMTTEEKA 151 200 ENSBTAP00000000119/1-510 KVGPGDRPLY LHVQGQTREL VDRAVNRIKE IITNGVVKAA TGTSPTFNGA ENSP00000357304/1-614 KVGPGDRPLY LHVQGQTREL VDRAVNRIKE IITNGVVKAA TGTSPTFNGA bmy_03397T0/1-614 KVGPGDRPLY LHVQGQTREL VDRAVNRIKE IITNGVVKAA TGTSPTFNGA ENSTTRP00000012655/1-610 KVGPGDRPLY LHVQGQTREL VDRAVNRIKE IITNGVVKAA TGTSPTFNGA 201 250 ENSBTAP00000000119/1-510 TVTVYHQPAP IAQLSPAVSQ KPPFQSGMHY VQDKLFVGLE HAVPTFNVKE ENSP00000357304/1-614 TVTVYHQPAP IAQLSPAVSQ KPPFQSGMHY VQDKLFVGLE HAVPTFNVKE bmy_03397T0/1-614 TVTVYHQPAP IAQLSPAVSQ KPPFQSGMHY VQDKLFVGLE HAVPTFNVKE ENSTTRP00000012655/1-610 TVTVYHQPAP IAQLSPAVSQ KPPFQSGMHY VQDKLFVGLE HAVPTFNVKE 251 300 ENSBTAP00000000119/1-510 KVEGPGCTYL QHIQIETGAK VFLRGKGSGC IEPASGREAF EPMYIYISHP ENSP00000357304/1-614 KVEGPGCSYL QHIQIETGAK VFLRGKGSGC IEPASGREAF EPMYIYISHP bmy_03397T0/1-614 KVEGPGCSYL QHIQIETGAK VFLRGKGSGC IEPASGREAF EPMYIYISHP ENSTTRP00000012655/1-610 KVEGPGCSYL QHIQIETGAK VFLRGKGSGC IEPASGREAF EPMYIYISHP 301 350 ENSBTAP00000000119/1-510 KPEGLAAAKK LCENLLQTVH AEYSRFVNQI NTAVPLPGYT QPSAISSVPP ENSP00000357304/1-614 KPEGLAAAKK LCENLLQTVH AEYSRFVNQI NTAVPLPGYT QPSAISSVPP bmy_03397T0/1-614 KPEGLAAAKK LCENLLQTVH AEYSRFVNQI NTAVPLPGYT QPSAISSVPP ENSTTRP00000012655/1-610 KPEGLAAAKK LCENLLQTVH AEYSRFVNQI NTAVPLPGYT QPSAISSVPP 351 400 ENSBTAP00000000119/1-510 QPPYYPSNGY QSGYPVVPPP QQPVQPPYGV PSIVPPAVSL APGVLPALPT ENSP00000357304/1-614 QPPYYPSNGY QSGYPVVPPP QQPVQPPYGV PSIVPPAVSL APGVLPALPT bmy_03397T0/1-614 QPPYYPSNGY QSGYPVVPPP QQPVQPPYGV PSIVPPAVSL APGVLPALPT ENSTTRP00000012655/1-610 QPPYYPSNGY QSGYPVVPPP QQPVQPPYGV PSIVPPAVSL APGVLPALPT 401 450 ENSBTAP00000000119/1-510 GVPPVPTQYP ITQVQPPAST GQSPMSGPFI PAAPVKTALP AGPQPPPQPQ ENSP00000357304/1-614 GVPPVPTQYP ITQVQPPAST GQSPMGGPFI PAAPVKTALP AGPQPQPQPQ bmy_03397T0/1-614 GVPPVPTQYP ITQVQPPAST GQSPMSGPFI PAAPVKTALP AGPPPPPQPQ ENSTTRP00000012655/1-610 GVPPVPTQYP ITQVQPPAST GQSPMSGPFI PAAPVKTALP AGPPPPP--- 451 500 ENSBTAP00000000119/1-510 PPLPSQPQAQ KRRFTEELPD ERESGLLGYQ ---------- ---------- ENSP00000357304/1-614 PPLPSQPQAQ KRRFTEELPD ERESGLLGYQ HGPIHMTNLG TGFSSQNEIE bmy_03397T0/1-614 PPLPSQPQAQ KRRFTEELPD ERESGLLGYQ HGPIHMTNLG TGFSGQNEIE ENSTTRP00000012655/1-610 -PLPSQPQAQ KRRFTEELPD ERESGLLGYQ HGPIHMTNLG TGFSGQNEIE 501 550 ENSBTAP00000000119/1-510 -VQASPVRMR LKVQDRSRQ- ---------- VPQAKSER-G TGS------- ENSP00000357304/1-614 GAGSKPASSS GKERERDRQL MPPPAFPVTG IKTESDERNG SGTLTGSHDY bmy_03397T0/1-614 GAGSKPASSS GKERERDRQL MPPPAFPVTG IKTESDERNG SGTLTGSHDY ENSTTRP00000012655/1-610 GAGSKPASSS GKERERDRQL MPPPAFPVTG IKTESDERNG SGTLTGSHDY 551 600 ENSBTAP00000000119/1-510 ---------- ---------- ---------- ---------- ---------- ENSP00000357304/1-614 PAKKMKTTEK GFGLVAYAAD SSDEEEEHGG HKNASSFPQG WSLGYQYPSS bmy_03397T0/1-614 PVKKMKTTEK GFGLVAYAAD SSDEEEEHGG HKNASSFPQG WSLGYQYPSS ENSTTRP00000012655/1-610 PVKKMKTTEK GFGLVAYAAD SSDEKEEHGG HKNASSFPQG WSLGYQYPSS 601 650 ENSBTAP00000000119/1-510 ---------- ---- ENSP00000357304/1-614 QPRAKQQMPF WMAP bmy_03397T0/1-614 QPRAKQQMPF WMAP ENSTTRP00000012655/1-610 QPRAKQQMPF WMAP