KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:28 2014 Check: 00 .. Name: ENSP00000272322/1-977 Len: 996 Check: 3739 Weight: 1.00 Name: ENSTTRP00000000655/1-942 Len: 996 Check: 4534 Weight: 1.00 Name: ENSBTAP00000000123/1-977 Len: 996 Check: 2028 Weight: 1.00 Name: bmy_01559T0/1-994 Len: 996 Check: 6419 Weight: 1.00 Name: BACU013720/1-965 Len: 996 Check: 1805 Weight: 1.00 // 1 50 ENSP00000272322/1-977 MASSHSSSPV PQGSSSDVFF KIEVDPSKHI RPVPSLPDVC PKEPTGDSHS ENSTTRP00000000655/1-942 MASSHSSSPV PQRSSSDVFF KKEVDPTKHI RPVQSLPDVC PKEPTGDSNS ENSBTAP00000000123/1-977 MASSHSSSPV PQGSSSDVFF KKEVDPTKHI RPVQSLPDVC PKEPTGDSSS bmy_01559T0/1-994 MASSHSSSPV PQGSSSDVFF KKEVDPAKHI RPVQSLPDVC PKEPTGDSNS BACU013720/1-965 MASSHSSSPV PQGSSSDVFF KKEVDPAKHI RPVQSLPDVC PKEPT----- 51 100 ENSP00000272322/1-977 LYVAPSLVTD QHRWTVYHSK VNLPAALNDP RLAKRESDFF TKTWGLDFVD ENSTTRP00000000655/1-942 LCVAPSLVTD QHRWTIYHSK VNLPAALNDP RLAKRESDFF TKTWGLDFVD ENSBTAP00000000123/1-977 LCVAPSLVTD QHRWTIYHSK VNLPAALNDP RLAKRESDFF TKTWGLDFVD bmy_01559T0/1-994 LCVAPSLVTD QHRWTIYHSK VNLPAALNDP RLAKRESDFF TKTWGLDFVD BACU013720/1-965 -------VTD QHRWTIYHSK VNLPAALNDP RLAKRESDFF TKTWGLDFVD 101 150 ENSP00000272322/1-977 TEVIPSFYLP QISKEHFTVY QQEISQREKI HERCKNICPP KDTFERTLLH ENSTTRP00000000655/1-942 TEVIPSFYLP QINKEHFTVY QQEISQREKI HERCKKICPP KDTFDRTLLH ENSBTAP00000000123/1-977 TEVIPSFYLP QISKEHFTVY QQEISQREKI HERCKNICPP KDTFDRTLLH bmy_01559T0/1-994 TEVIPSFYLP QISKEHFTVY QQEISQREKI HERCKKICPP KDTFDRTLLH BACU013720/1-965 TEVIPSFYLP QISKEHFTVY QQEISQREKI HERCKKICPP KDTFDRTLLH 151 200 ENSP00000272322/1-977 THDKSRTDLE QVPKIFMKPD FALDDSLTFN SVLPWSHFNT AGGKGNRDAA ENSTTRP00000000655/1-942 THXXXXXXXX XXXXIFMKPD FALDDSLTFN SVLPWSHFNT AGGKGNRDAA ENSBTAP00000000123/1-977 THDKSRTDLE QVPKIFMKPD FALDDSLTFN SVLPWSHFNT AGGKGNRDAA bmy_01559T0/1-994 THDKSRTDLE QVPKIFMKPD FALDDSLTFN SVLPWSHFNT AGGKGNRDAA BACU013720/1-965 THDKSRTDLE QVPKIFMKPD FALDDSLTFN SVLPWSHFNT AGGKGNRDAA 201 250 ENSP00000272322/1-977 SSKLLQEKLS HYLDIVEVNI AHQISLRSEA FFHAMTSQHE LQDYLRKTSQ ENSTTRP00000000655/1-942 SSKLLQEKLS HYLDIVEVNI AHQISLRSEA FFHAMTSQHE LQDYLKKTSQ ENSBTAP00000000123/1-977 SSKLLQEKLS HYLDIVEVNI AHQISLRSEA FFHAMTSQHE LQDYLKKTSQ bmy_01559T0/1-994 SSKLLQEKLS HYLDIVEVNI AHQISLRSEA FFHAMTSQHE LQDYLKKTSQ BACU013720/1-965 SSKLLQEKLS HYLDIVEVNI AHQISLRSEA FFHAMTSQHE LQDYLKKTSQ 251 300 ENSP00000272322/1-977 AVKMLRDKIA QIDKVMCEGS LHILRLALTR NNCVKVYNKL KLMATVHQTQ ENSTTRP00000000655/1-942 AVKMLRDKIA QIDKVMCEGS LHILRLALTR NNCVKVYNKL KLMATVHQTQ ENSBTAP00000000123/1-977 AVKMLRDKIA QIDKVMCEGS LHILRLALTR NNCVKVYNKL KLMATVHQTQ bmy_01559T0/1-994 AVKMLRDKIA QIDKVMCEGS LHILRLALTR NNCVKVYNKL KLMATVHQTQ BACU013720/1-965 AVKMLRDKIA QIDKVMCEGS LHILRLALTR NNCVKVYNKL KLMATVHQTQ 301 350 ENSP00000272322/1-977 PTVQVLLSTS EFVGALDLIA TTQEVLQQEL QGIHSFRHLG SQLCELEKLI ENSTTRP00000000655/1-942 PTVQVLLSTS EFVGALDLIA TTQEVLQQEL QGIHSFRHLG SQLCELEKLI ENSBTAP00000000123/1-977 PTVQVLLSTS EFVGALDLIA TTQEVLQQEL QGIHSFRHLG SQLCELEKLI bmy_01559T0/1-994 PTVQVLLSTS EFVGALDLIA TTQEVLQQEL QGIHSFRHLG SQLCELEKLI BACU013720/1-965 PTVQVLLSTS EFVGALDLIA TTQEVLQQEL QGIHSFRHLG SQLCELEKLI 351 400 ENSP00000272322/1-977 DKMMIAEFST YSHSDLNRPL EDDCQVLEEE RLISLVFGLL KQRKLNFLEI ENSTTRP00000000655/1-942 DKMMIAEFST YSHSDLNRPL EDDCQILEEE RLVSLVFGLL KQRKLNFLEI ENSBTAP00000000123/1-977 DKMMIAEFST YSHSDLNRPL EDDCHILEEE RLISLVFGLL KQRKLNFLEI bmy_01559T0/1-994 DKMMIAEFST YSHSDLNRPL EDDCQILEEE RLVSLVFGLL KQRKLNFLEI BACU013720/1-965 DKMMIAEFST YSHSDLNRPL EDDCQILEEE RLVSLVFGLL KQRKLNFLEI 401 450 ENSP00000272322/1-977 YGEKMVITAK NIIKQ----- ---------- ----CVINKV SQTEEIDTDV ENSTTRP00000000655/1-942 YSEEMIITAK NIIKQ----- ---------- ----CVINKV SQIEDIDTDV ENSBTAP00000000123/1-977 YSEEMIITAK NIIKQ----- ---------- ----CVINKV SQIEDIDTDV bmy_01559T0/1-994 YSEEMIITAK NIIKQGKGNF LNLENILYRK XIGVSFENKV LGVAALIKN- BACU013720/1-965 YSEEMIITAK NIIKQ----- ---------- ----CVINKV SQIEDIDTDV 451 500 ENSP00000272322/1-977 VVKLADQMRM LNFPQWFDLL KDIFSKFTIF LQRVKATLNI IHSVVLSVLD ENSTTRP00000000655/1-942 VLKLADQMRM LNFLQWFDLL KDIFSKFTIF LQRVKATLNI IHSVVLSVLD ENSBTAP00000000123/1-977 VLKLADQMRM LNFPQWFDLL TDIFSKFTIF LQRVKATLNI IHSVVLSVLD bmy_01559T0/1-994 -LELADQMRM LNFLQWFDLL KDIFSKFTIF LQRVKATLNI IHSVVLSVLD BACU013720/1-965 VLKLADQMRM LNFLQWFDLL KDIFSKFTIF LQRVKATLNI IHSVVLSVLD 501 550 ENSP00000272322/1-977 KNQRTRELEE ISQQKNAAKD NSLDTEVAYL IHEGMFISDA FGEGELTPIA ENSTTRP00000000655/1-942 KNQRTRELEE ISQQKNAAKD NSLDTEVAYL IHEGMFISDA FSESELTPIA ENSBTAP00000000123/1-977 KNQRTRELEE ISQQKNAAKD NSLDTEVAYL IHEGMFISDA FSESELTPIA bmy_01559T0/1-994 KNQRTRELEE ISQQKNAAKD NSLDTEVAYL IHEGMFISDA FSESELTPIT BACU013720/1-965 KNQRTRELEE IPQQKNAAKD NSLDTEVAYL IHEGMFISDA FSESELTPIA 551 600 ENSP00000272322/1-977 VDTTSQRNAS PNSEPCSSDS VSEPECTTDS SSSKEHTSSS AIPGGVDIMV ENSTTRP00000000655/1-942 IDATSQRNAS PNSEPCSSDS VSEPECTTDS SSSKEQTSSS VTPGAVDIMV ENSBTAP00000000123/1-977 IDTTSQRNAS PNSEPCSSDS VSEPECTTDS SSSKEQISSS VTPGAVDIMV bmy_01559T0/1-994 IDTTSQRNAS PNSEPCSSDS VSEPECATDS SSSKEQTSSS VTPGAVDIMV BACU013720/1-965 IDTTSQRNAS PNSEPCSSDS VSEPECATDS SSSKEQTSSS VTPGAVDIMV 601 650 ENSP00000272322/1-977 SEDMKLTDSE LGKLANNIQE LLYSASDICH DRAVKFLMSR AKDGFLEKLN ENSTTRP00000000655/1-942 NEDMKLTDLE LGKLANNVQE LLYSASDICH DRAVKFLMSR AKDGFLEKLN ENSBTAP00000000123/1-977 NEDVKLSDLE LGKLANNIQE LLYSASDICH DRAVKFLMSR AKDGFLEKLN bmy_01559T0/1-994 NEDMKLTDLE LGKLANNVQE LLYSASDICH DRAVKFLMSR AKDGFLEKLN BACU013720/1-965 NEDMKLTDLE LGKLANNVQE LLYSASDICH DRAVKFLMSR AKDGFLEKLN 651 700 ENSP00000272322/1-977 SMEFITLSRL METFILDTEQ ICGRKSTSLL GALQSQAIKF VNRFHEERKT ENSTTRP00000000655/1-942 STEFITLSRL METFILETEQ ICGRKSMSLL GALQSQANKF VNRFHEERKT ENSBTAP00000000123/1-977 STEFISLSRL METFILETEQ ICGRKSMSLL GALQSQANKF VNRFHEERKT bmy_01559T0/1-994 STEFITLSRL METFILETEQ ICGRKSMSLL GALQSQANKF VNRFHEERKT BACU013720/1-965 STEFITLSRL METFILETEQ ICGRKSMSLL GALQSQANKF VNRFHEERKT 701 750 ENSP00000272322/1-977 KLSLLLDNER WKQADVPAEF QDLVDSLSDG KIALPEKKSG ATEERKPAEV ENSTTRP00000000655/1-942 KLSLLLDNER WKQADVPAEF QDLVDSIADG KIALPEKKSG ATEERKPAEV ENSBTAP00000000123/1-977 KLSLLLDNER WKQADVPAEF QDLVDSISHG KIALPEKKSG ATEERKPAEV bmy_01559T0/1-994 KLSLLLDNER WKQADVPAEF QDLVDSIADG KIALPEKKSG AAEERKPAEV BACU013720/1-965 KLSLLLDNER WKQADVPAEF QDLVDSIADG KIALPEKKSG ATEERKPAEV 751 800 ENSP00000272322/1-977 LIVEGQQYAV VGTVLLLIRI ILEYCQCVDN IPSVTTDMLT RLSDLLKYFN ENSTTRP00000000655/1-942 LIVEGQQYAV VGTVLLLIRI ILEYCQCVDN IPSVTTDMLT RLSDLLKYFN ENSBTAP00000000123/1-977 LTVEGQQYAV VGTVLLLIRI ILEYCQCVDN IPSVTTDMLT RLSDLLKYFN bmy_01559T0/1-994 LIVEGQQYAV VGTVLLLIRI ILEYCQCVDN IPSVTTDMLT RLSDLLKYFN BACU013720/1-965 LIVEGQQYAV VGTVLLLIRI ILEYCQCVDN IPSVTTDMLT RLSDLLKYFN 801 850 ENSP00000272322/1-977 SRSCQLVLGA GALQVVGLKT ITTKNLALSS RCLQLIVHYI PVIRAHFEAR ENSTTRP00000000655/1-942 SRSCQLVLGA GALQVVGLKT ITTKNLALSS RCLQLIVHYI PVIRAHFEAR ENSBTAP00000000123/1-977 SRSCQLVLGA GALQVVGLKT ITTKNLALSS RCLQLIVHYI PVIRAHFEAR bmy_01559T0/1-994 SRSCQLVLGA GALQVVGLKT ITTKNLALSS RCLQLIVHYI PVIRAHFEAR BACU013720/1-965 SRSCQLVLGA GALQVVGLKT ITTKNLALSS RCLQLIVHYI PVIRAHFEAR 851 900 ENSP00000272322/1-977 LPPKQYSMLR HFDHITKDYH DHIAEISAKL VAIMDSLFDK LLSKYEVKAP ENSTTRP00000000655/1-942 LQPKQYSMLR HFDHITKDYH DHIAEISAKL VAIMDSLFDK LLSKYEVKAP ENSBTAP00000000123/1-977 LQPKQYSMLR HFDHITKDYH DHIAEISAKL VAIMDSLFDK LLSKYEVKAP bmy_01559T0/1-994 LQPKQYSMLR HFDHITKDYH DHIAEISAKL VAIMDSLFDK LLSKYEVKAP BACU013720/1-965 LQPKQYSMLR HFDHITKDYH DHIAEISAKL VAIMDSLFDK LLSKYEVKAP 901 950 ENSP00000272322/1-977 VPSACFRNIC KQMTKMHEAI FDLLPEEQTQ MLFLRINASY KLHLKKQLSH ENSTTRP00000000655/1-942 VPSACFRNIC KQMAKMHEAI FDLLPEEQTQ MLFLRINASY KLHLKKQLSH ENSBTAP00000000123/1-977 VPSACFRNIC KQMAKMHEAI FDLLPEEQTQ MLFLRINASY KLHLKKQLSH bmy_01559T0/1-994 VPSACFRNIC KQMAKMHEAI FDLLPEEQTQ MLFLRINASY KLHLKKQLSH BACU013720/1-965 VPSACFRNIC KQMAKMHEAI FDLLPEEQTQ MLFLRINASY KLHLKKQLSH 951 1000 ENSP00000272322/1-977 LNVINDGGPQ NGLVTADVAF YTGNLQALKG LKDLDLNMAE IWEQKR ENSTTRP00000000655/1-942 LNVINDGGPQ N--------- ---------- ---------- ------ ENSBTAP00000000123/1-977 LNVINDGGPQ NGLVTADVAF YTGNLQALKG LQDLDLNMAE IWEQKR bmy_01559T0/1-994 LNVINDGGPQ NGLVTADVAF YTGNLQALKG LKDLDLNMAE IWEQKR BACU013720/1-965 LNVINDGGPQ NGLVTADVAF YTGNLQALKG LKDLDLNMAE IWEQKR