KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:30 2014 Check: 00 .. Name: ENSP00000403712/1-574 Len: 1175 Check: 6785 Weight: 1.00 Name: ENSBTAP00000000143/1-574 Len: 1175 Check: 4937 Weight: 1.00 Name: BACU001240/1-1173 Len: 1175 Check: 7562 Weight: 1.00 Name: bmy_01739T0/1-610 Len: 1175 Check: 4200 Weight: 1.00 Name: ENSTTRP00000009673/1-574 Len: 1175 Check: 5462 Weight: 1.00 // 1 50 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 MGGPVREPAL SVALWLSWGA ALGAVACAMV LLTQQTELQT LRREVTRLQR bmy_01739T0/1-610 ---------- ---------- ---------- MPTHPTHPTV MENSLPTLDH ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 TGGPSEKGEG YLWLSLREQS SDGVEARENG ERSRRRRAVL TKKQKKKRSV bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 LHLVPVNITS KEDSDVTEVM WQPALWRGRG LEAQGYVIRV WDAGVYLLYS bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 QVLFHDVTFT MGQVVSREGQ GRQETLFRCI RSMPSNPDWA YNSCYSAGYW bmy_01739T0/1-610 ---------- ---------- ---------- -------GFP AEIVFSSGYW ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000403712/1-574 -MKETIQGTG SWGPEPPGPG IPPAYSSPRR ERLRWPPPPK PRLKSGGGFG ENSBTAP00000000143/1-574 -MKETIQGTG SWGPEPPGPG IAPAFSSPRR ERLRWPPPPK PRLKSGGGFG BACU001240/1-1173 KMKETIQGTG SWGPEPPGPG IAPAYSSPRR ERLRWPPPPK PRLKSGGGFG bmy_01739T0/1-610 KMKETIQGTG SWGPEPPGPG IAPAYSSPRR ERLRWPPPPK PRLKSGGGFG ENSTTRP00000009673/1-574 -MKETIQGTG SWGPEPPGPG IAPAYSSPRR ERLRWPPPPK PRLKSGGGFG 251 300 ENSP00000403712/1-574 PDPGSGTTVP ARRLPVPRPS FDASASEEEE EEEEEEDEDE EEEVAAWRLP ENSBTAP00000000143/1-574 PDPGSGTTVP TRRLPVPRPS FDASASEEEE EEEDDEDEDE EEEVAAWRLP BACU001240/1-1173 PDPGSGTTVP TRRLPVPRPS FDASASEEEE EEDDDEEEDE EEEVAAWRLP bmy_01739T0/1-610 PDPGSGTTVP TRRLPVPRPS FDASASEEEE EEEDDEEEDE EEEVAAWRLP ENSTTRP00000009673/1-574 PDPGSGTTVP TRRLPVPRPS FDASASEEEE EEEDDEDEDE EEEVAAWRLP 301 350 ENSP00000403712/1-574 PRWSQLGTSQ RPR--PSRPT HRKTCSQRRR RAMRAFRMLL YSKSTSLTFH ENSBTAP00000000143/1-574 PRWGQLGASQ RPR--PPRPT HRKTCSQRRR RAMRAFRMLL YSKSTSLTFH BACU001240/1-1173 PRWGQLGTSQ RPR--PPRPA HRKTCSQRRR RAMRAFRMLL YSKSTSLTFH bmy_01739T0/1-610 PRWGQLGASQ RPRPPPPRPA HRKTCSQRRR RAMRAFRMLL YSKSTSLTFH ENSTTRP00000009673/1-574 PRWGQLGASQ RPR--PPRPA HRKTCSQRRR RAMRAFRMLL YSKSTSLTFH 351 400 ENSP00000403712/1-574 WKLWGRHRGR RRGLAHPKNH LSPQQGGATP QVPSPCCRFD SPRGPPPPRL ENSBTAP00000000143/1-574 WKLWGRHRGR RRNLAHPKNH LSPREGAVTP QVPSPCCRFD SPRGPPPPRL BACU001240/1-1173 WKLWGRHRGR RRSLAHPKNH LSPQEGGVTP QVPSPCCRFD SPRGPPPPRL bmy_01739T0/1-610 WKLWGRHRGR RRSLAHPKNH LSPQEGGVTP QVPSPCCRFD SPRGPPPPRL ENSTTRP00000009673/1-574 WKLWGRHRGR RRSLAHPKNH LSPQEGGVTP QVPSPCCRFD SPRGPPPPRL 401 450 ENSP00000403712/1-574 GLLGALMAED GVRGSPPVPS GPPMEEDGLR WTPKSPLDPD SGLLSCTLPN ENSBTAP00000000143/1-574 SLLGALMAED GVRGSPPVPS GAPMEEDGLR WTPKSPLGPD SGLLSCTLPN BACU001240/1-1173 GLLGALMAED GVRGSPPVPS GPPMEEDGLR WTPKSPLDPD SGLLSCTLPN bmy_01739T0/1-610 GLLGALMAED GVRGSPPVPS GPPMEEDGLR WTPKSPLDPD SGLLSCTLPN ENSTTRP00000009673/1-574 GLLGALMAED GVRGSPPVPS GPPMEEDGLR WTPKSPLDPD SGLLSCTLPN 451 500 ENSP00000403712/1-574 GFGGQSGPEG ERSLAPPDAS ILISNVCSIG DHVAQELFQG SDLGMAEEAE ENSBTAP00000000143/1-574 GFGGPLGPEG ERSLAPPDAS ILISNVCSIG DHVAQELFQG SDVGTAEEAE BACU001240/1-1173 GFGGPPGPEG ERSLAPPDAS ILISNVCSIG DHVAQELFQG SDLGTAEEAE bmy_01739T0/1-610 GFGGPPGPEG ERSLAPPDAS ILISNVCSIG DHVAQELFQG SDLGTAEEAE ENSTTRP00000009673/1-574 GFGGPPGPEG ERSLAPPDAS ILISNVCSIG DHVAQELFQG SDLGTAEEAE 501 550 ENSP00000403712/1-574 RPGEKAGQHS PLREEHVTCV QSILDEFLQT YGSLIPLSTD EVVEKLEDIF ENSBTAP00000000143/1-574 RPGEKAGQHS PLREEHVTCV QSILDEFLQT YGSLIPLSTD EVVEKLEDIF BACU001240/1-1173 RTGEKSGQHS PLREEHVTCV QSILDEFLQT YGSLIPLSTD EVVEKLEDIF bmy_01739T0/1-610 RTGEKSGQHS PLREEHVTCV QSILDEFLQT YGSLIPLSTD EVVEKLEDIF ENSTTRP00000009673/1-574 RPGEKAGQHS PLREEHVTCV QSILDEFLQT YGSLIPLSTD EVVEKLEDIF 551 600 ENSP00000403712/1-574 QQEFSTPSRK GLVLQLIQSY QRMPGNAMVR GFRVAYKRHV LTMDDLGTLY ENSBTAP00000000143/1-574 QQEFSAPSRK GLVLQLIQSY QRMPGNAMVR GFRVTYKRHV LTMDDLGTLY BACU001240/1-1173 QQEFSTPSRK GLVLQLIQSY QRMPGNAMVR GFRVAYKRHV LTMDDLGTLY bmy_01739T0/1-610 QQEFSTPSRK GLVLQLIQSY QRMPGNAMVR GFRVAYKRHV LTMDDLGTLY ENSTTRP00000009673/1-574 QQEFSTPSRK GLVLQLIQSY QRMPGNAMVR GFRVAYKRHV LTMDDLGTLY 601 650 ENSP00000403712/1-574 GQNWLNDQVM NMYGDLVMDT VPEKVHFFNS FFYDKLRTKG YDGVKRWTKN ENSBTAP00000000143/1-574 GQNWLNDQVM NMYGDLVMDT VPEKVHFFNS FFYDKLRTKG YDGVKRWTKN BACU001240/1-1173 GQNWLNDQVM NMYGDLVMDT VPEKVHFFNS FFYDKLRTKG YDGVKRWTKN bmy_01739T0/1-610 GQNWLNDQVM NMYGDLVMDT VPEKVHFFNS FFYDKLRTKG YDGVKRWTKN ENSTTRP00000009673/1-574 GQNWLNDQVM NMYGDLVMDT VPEKVHFFNS FFYDKLRTKG YDGVKRWTKN 651 700 ENSP00000403712/1-574 VDIFNKELLL IPIHLEVHWS LISVDVRRRT ITYFDSQRTL NRRCPKHIAK ENSBTAP00000000143/1-574 VDIFNKELLL IPIHLEVHWS LISVDVRRRT ITYFDSQRTL NRRCPKHIAK BACU001240/1-1173 VDIFNKELLL IPIHLEVHWS LISVDVRRRT ITYFDSQRTL NRRCPKHIAK bmy_01739T0/1-610 VDIFNKELLL IPIHLEVHWS LISVDVRRRT ITYFDSQRTL NRRCPKHIAK ENSTTRP00000009673/1-574 VDIFNKELLL IPIHLEVHWS LISVDVRRRT ITYFDSQRTL NRRCPKHIAK 701 750 ENSP00000403712/1-574 YLQAEAVKKD RLDFHQGWKG YFKMNVARQN NDSDCGAFVL QYCKHLALSQ ENSBTAP00000000143/1-574 YLQAEAVKKD RLDFHQGWKG YFKMNVARQN NDSDCGAFVL QYCKHLALSQ BACU001240/1-1173 YLQAEAVKKD RLDFHQGWKG YFKMNVARQN NDSDCGAFVL QYCKHLALSQ bmy_01739T0/1-610 YLQAEAVKKD RLDFHQGWKG YFKMNVARQN NDSDCGAFVL QYCKHLALSQ ENSTTRP00000009673/1-574 YLQAEAVKKD RLDFHQGWKG YFKMNVARQN NDSDCGAFVL QYCKHLALSQ 751 800 ENSP00000403712/1-574 PFSFTQQDMP KLRRQIYKEL CHCKLTV--- ---------- ---------- ENSBTAP00000000143/1-574 PFSFTQQDMP KLRRQIYKEL CHCKLTV--- ---------- ---------- BACU001240/1-1173 PFSFTQQDMP KLRRQIYKEL CHCKLTVSRD NGPDGMEPEG VIESNWNEIV bmy_01739T0/1-610 PFSFTQQDMP KLRRQIYKEL CHCKLTV--- ---------- ---------- ENSTTRP00000009673/1-574 PFSFTQQDMP KLRRQIYKEL CHCKLTV--- ---------- ---------- 801 850 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 DSFDDMNLSE SLLRGIYAYG FEKPSAIQQR AILPCIKGYD VIAQAQSGTG bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 KTATFAISIL QQIELDLKAT QALVLAPTRE LAQQIQKVVM ALGDYMGASC bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 HACIGGTNVR AEVQKLQMEA PHIIVGTPGR VFDMLNRRYL SPKYIKMFVL bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 DEADEMLSRG FKDQIYDIFQ KLNSNTQVVL LSATMPSDVL EVTKKFMRDP bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 IRILVKKEEL TLEGIRQFYI NVEREEWKLD TLCDLYETLT ITQAVIFINT bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 RRKVDWLTEK MHARDFTVSA MHGDMDQKER DVIMREFRSG SSRVLITTDL bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000403712/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000143/1-574 ---------- ---------- ---------- ---------- ---------- BACU001240/1-1173 LARGIDVQQV SLVINYDLPT NRENYIHRIG RGGRFGRKGV AINMVTEEDK bmy_01739T0/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009673/1-574 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000403712/1-574 ---------- ---------- ----- ENSBTAP00000000143/1-574 ---------- ---------- ----- BACU001240/1-1173 RTLRDIETFY NTSIEEMPLN VADLI bmy_01739T0/1-610 ---------- ---------- ----- ENSTTRP00000009673/1-574 ---------- ---------- -----