KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:31 2014 Check: 00 .. Name: ENSP00000250092/1-354 Len: 364 Check: 3156 Weight: 1.00 Name: ENSBTAP00000000146/1-335 Len: 364 Check: 2393 Weight: 1.00 Name: ENSTTRP00000009685/1-335 Len: 364 Check: 1305 Weight: 1.00 Name: bmy_01737T0/1-355 Len: 364 Check: 4718 Weight: 1.00 Name: BACU019677/1-332 Len: 364 Check: 1381 Weight: 1.00 // 1 50 ENSP00000250092/1-354 MRLAVLFSGA LLGLLA---- -AQGTGNDCP HKKSATLLPS FTVTPTVTES ENSBTAP00000000146/1-335 MRLAVFFSGA LLGLLA---- -AQGTGNDCP HKKSATLLPS FTVTPTATES ENSTTRP00000009685/1-335 MRLAVLFSGA LLGLLA---- -AQGTGNDCP HKKSATLLPS FTVTPTATES bmy_01737T0/1-355 MRLAVLFSGA LLGLLAVFPL KAQGTGNDCP HKKSATLLPS FTVTPTATES BACU019677/1-332 MRLAVLLSGA LLGLLA---- -AQGTGNDCP HKKSATLLPS FTVTPTATES 51 100 ENSP00000250092/1-354 T---GTTSHR TTKSHKTTTH RTTTTGTTSH GPTTATHNPT TTSHGNVTVH ENSBTAP00000000146/1-335 TPSPGTTSHR TTKSHRTTTW RISTTTHTTN --TTGTTSSE ---------- ENSTTRP00000009685/1-335 TTSPGTTSHR TTKSHRTTTY TATTTHKTT- --TTGTTSHE ---------- bmy_01737T0/1-355 TTSPGTTSHR TTTYTASTTH KTTTTGTTSH ESSTATQATH ---------H BACU019677/1-332 TTSPGTTSHR TTTYTASTTH KTTTTGTTSH ESSTATQ--- ---------- 101 150 ENSP00000250092/1-354 PTSNSTATSQ GPSTATHSPA -TTSHGNATV HPTSNSTATS PG-FTSSAHP ENSBTAP00000000146/1-335 ---------- -SPTATHSPA TTTSHQNTTV HPTSNITATS PGPSTRSPHP ENSTTRP00000009685/1-335 ---------- -SSTATHHPA TTTSHGNATA HPTSNSTATS PGPSTRSPRP bmy_01737T0/1-355 PATTTSHDSS TATQATHHPA TTTSHGNATV HPTSNSTATS PGPSTRSPRP BACU019677/1-332 ---------- ----ATHHPA TTTSHGNATV HPTSNSTATS PGPSTRSPRP 151 200 ENSP00000250092/1-354 EPPPPSPSPS PTSKETIGDY TWTNGSQPCV HLQAQIQIRV MYTTQGGGEA ENSBTAP00000000146/1-335 E-PPPSPSPS PGSKEAIGDY TWSNGSQPCV RLQAQIQIRV LYPTQGGGEA ENSTTRP00000009685/1-335 GPPPPSPSPS PGSKEAIGDY IWTNGSQPCV RLQAQIQIRV LYPTQDGGEA bmy_01737T0/1-355 GPPPPSPSPS PGSKEAIGDY TWTNGSQPCI RLQAQIQIRV LYPTQGGGEA BACU019677/1-332 GPPPPSPSPS PGSKEAIGDY TWTNGSQPCI RLQAQIQIRV LYPTQGGGEA 201 250 ENSP00000250092/1-354 WGISVLNPNK TKVQGSCEGA HPHLLLSFPY GHLSFGFMQD LQQKVVYLSY ENSBTAP00000000146/1-335 WGISVLNPNR TKAQGGCEGT HSHLLLSFPS GQLSFGFKQD PLQSAVYLNY ENSTTRP00000009685/1-335 WGISVLNPNK TKAQGGCESN HPHLLLSFPY GQLSFGFKQE PLQSTIYLNH bmy_01737T0/1-355 WGTSVLNPNK TKAQGGCEGA HPHLLLSFPY GQLSFGFKQE PLQSTVYLNH BACU019677/1-332 WGTSVLNPNK TKAQGGCEGA HPHLLLSFPY GQLSFGFKQE PLQSTIYLNH 251 300 ENSP00000250092/1-354 MAVEYNVSFP HAAQWTFSAQ NASLRDLQAP LGQSFSCSNS SIILSPAVHL ENSBTAP00000000146/1-335 MAVEYNVSFP QAVQWTFSVQ NSSLRDLQTP LGHSFSCRNA SIIVSPALHL ENSTTRP00000009685/1-335 VTVEYNVSFP QASQWIFSVQ NSSLRDLQTP LGQSFSCKNA SVILSPAFHL bmy_01737T0/1-355 VTVEYNVSFP QAAQWIFSXQ NSSLRDLQTP LGRSFSCRNA SVILSPAFHL BACU019677/1-332 VTVEYNVSFP QAAQWIFSVQ NSSLRDLQTP LGRSFSCRNS SVILSPAFHL 301 350 ENSP00000250092/1-354 DLLSLRLQAA QLPHTGVFGQ SFSCPSDRSI LLPLIIGLIL LGLLALVLIA ENSBTAP00000000146/1-335 DLLSLKLQAA QLSPSGAFGP SFSCPNDKSI LLPLIIGLIL LGLLTLVLVT ENSTTRP00000009685/1-335 DLLSLKLQAA QLPPTGAFGP SFSCPSDRSI LLPLIIGLIL LGLLTLVLVT bmy_01737T0/1-355 DLLSLKLQAA QLPPTGAFGP SFSCPSDQSI LLPLIIGLIL LGLLTLVLVT BACU019677/1-332 DLLSLKLQAA QLPPTGAFGP SFSCPSDQSI LLPLIIGLIL LGLLTLVLVT 351 400 ENSP00000250092/1-354 FCIIRRRPSA YQAL ENSBTAP00000000146/1-335 FCIIRRRPPT YQPL ENSTTRP00000009685/1-335 FCIVRRRPPT YQPL bmy_01737T0/1-355 FCVIRRRPPT YQPL BACU019677/1-332 FCVIQRRPPT YQPL