KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:36 2014 Check: 00 .. Name: ENSP00000355802/1-455 Len: 455 Check: 1615 Weight: 1.00 Name: ENSBTAP00000000159/1-451 Len: 455 Check: 9468 Weight: 1.00 Name: ENSTTRP00000009622/1-451 Len: 455 Check: 632 Weight: 1.00 Name: bmy_10527T0/1-346 Len: 455 Check: 1247 Weight: 1.00 Name: BACU019665/1-451 Len: 455 Check: 9664 Weight: 1.00 // 1 50 ENSP00000355802/1-455 MWLEILLTSV LGFAIYWFIS RDKEETLPLE DGWWGPGTRS AAREDDSIRP ENSBTAP00000000159/1-451 MWLEILLASV LGFVIYWFVS KDKEETLPLE DGWWGPGVRP TAGEDKSIRP ENSTTRP00000009622/1-451 MWLEILLASV LGFVIYWFVS KDKEETLPLE DGWWGPGVRP TAGEDESIRP bmy_10527T0/1-346 MWLEILLASV LGFVIYWFIS KDKEETLPLE DGWWGPGVRP TAGEDESIRP BACU019665/1-451 MWLEILLASV LGFVIYWFVS KDKEETLPLE DGWWGPGVRP TAGEDESIRP 51 100 ENSP00000355802/1-455 FKVETSDEEI HDLHQRIDKF RFTPPLEDSC FHYGFNSNYL KKVISYWRNE ENSBTAP00000000159/1-451 FKVETSDEEI NDLHQRIDRV RLTPPLEDSR FHYGFNSNYL KKIISYWRNE ENSTTRP00000009622/1-451 FKVETSDEEI NDLHQRIDKV RLTPPLEDSR FHYGFNSNYL QKVISYWRNE bmy_10527T0/1-346 FKVETSDEEI NDLHQRIDKV RLTPPLEDSR FHYGFNSNYL KKIISYWRNE BACU019665/1-451 FKVETSDEEI NDLHQRIDKV RLTPPLEDSR FHYGFNSNYL KKIISYWRNE 101 150 ENSP00000355802/1-455 FDWKKQVEIL NRYPHFKTKI EGLDIHFIHV KPPQLPAGHT PKPLLMVHGW ENSBTAP00000000159/1-451 FDWRKQVEIL NKYPHFKTKI EGLDIHFIHV KPPNLPSGQT PKPLLMVHGW ENSTTRP00000009622/1-451 FDWRKQVESL NRYPHFKTKI EGLDIHFIHV KPPQLPSGQT PKPLLMVHGW bmy_10527T0/1-346 FDWRKQVEIL NRYPHFKTKI EGLDIHFIHV KPPQLPSGQT PKPLLMVHGW BACU019665/1-451 FDWRKQVEIL NRYPHFKTKI EGLDIHFIHV KPPQLPSGQT PKPLLMVHGW 151 200 ENSP00000355802/1-455 PGSFYEFYKI IPLLTDPKNH GLSDEHVFEV ICPSIPGYGF SEASSKKGFN ENSBTAP00000000159/1-451 PGSFYEFYKI IPFLTDPKNH GLSDEHVFEV ICPSIPGYSF SEASSKKGFN ENSTTRP00000009622/1-451 PGSFYEFYKI IPLLTDPKNH GLSDEHVFEV ICPSIPGYGF SEASSKKGFD bmy_10527T0/1-346 PGSFYEFYKI IPLLTDPENH GLSNEHVFEV ICPSIPGYGF SEASSKKGFN BACU019665/1-451 PGSFYEFYKI IPLLTDPEKH GLSNELAFEV VCPSIPGYGF SEASSKKGFN 201 250 ENSP00000355802/1-455 SVATARIFYK LMLRLGFQEF YIQGGDWGSL ICTNMAQLVP SHVKGLHLNM ENSBTAP00000000159/1-451 SVATARIFYK LMLRLGFQKF YIQGGDWGAL ICTNMAQLVP SHIKGLHLNM ENSTTRP00000009622/1-451 SVATARIFYK LMLRLGFQQF YIQGGDWGAL ICTNMAQLVP SHVKGLHLNM bmy_10527T0/1-346 SVATARIFYK LMLRLGFQQF YVQGGDWGAL ICTNMAQLVP SHVKGLHLNM BACU019665/1-451 SVATARIFYK LMLRLGFQQF YVQGGDWGAL ICTNMAQLVP SHVKGLHLNM 251 300 ENSP00000355802/1-455 ALVLSNFSTL TLLLGQRFGR FLGLTERDVE LLYPVKEKVF YSLMRESGYM ENSBTAP00000000159/1-451 ALILRNFYTL TLPLGRCFGG LFGYTERDME LIYPFK-KIF FSLLRESGYL ENSTTRP00000009622/1-451 AFILRNFYTL TLLLGRRFGR LFGYTKRDME LMYSLK-KIF FNLLRESGYL bmy_10527T0/1-346 AFILRNFYTL TLLLGWRFGR LFGYTKRDME LMSPLK-KIF FNLVRESGYM BACU019665/1-451 AFILRNFYTL TLLLGWRFGR LFGYTKRDME LMSPLK-KIF FNLVRETGYM 301 350 ENSP00000355802/1-455 HIQCTKPDTV GSALNDSPVG LAAYILEKFS TWTNTEFRYL EDGGLERKFS ENSBTAP00000000159/1-451 HIQSTKPDTV GCALNDSPVG LAAYILEKFS TWTNSEFRDL EDGGLERKFS ENSTTRP00000009622/1-451 HIQSTKPDTV GCALNDSPVG LAAYILEKFS TWTNPEFRDL EDGGLERKFS bmy_10527T0/1-346 HIQSTKPDTV GCALNDSPVG LAAYILEKFS TWTNPEFRDL EDGGLER--- BACU019665/1-451 HIQSTKPDTV GCALNDSPVG LAAYILEKFS TWTNPEFRDL EDGGLERKFS 351 400 ENSP00000355802/1-455 LDDLLTNVML YWTTGTIISS QRFYKENLGQ GWMTQKHERM KVYVPTGFSA ENSBTAP00000000159/1-451 LDDLLTGIML YWTTGTITSS QRFYKENLGQ ---VNKHEML KVYVPTGFAA ENSTTRP00000009622/1-451 LDDLLTGVML YWTTGTITSS QRFYKENMRL ---DSRHEGI KVHVPMGFAA bmy_10527T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU019665/1-451 LDDLLTGTML YWTTGTITSS QRFYKENLRL ---DNMHEGI KVHVPTGFAA 401 450 ENSP00000355802/1-455 FPFELLHTPE KWVRFKYPKL ISYSYMVRGG HFAAFEEPEL LAQDIRKFLS ENSBTAP00000000159/1-451 FPCELMHLPE KWVKTKYPNL ISYSYMPRGG HFAAFEEPEL LAQDIRKFVG ENSTTRP00000009622/1-451 FPCEVIHVPE KWVKSKYPKL ISYSYMPRGG HFAAFEEPEL LAQDIHKFVG bmy_10527T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU019665/1-451 FPCELVHVPE KWVKSKYPKL ISYSYMPRGG HFAAFEEPEL LAQDIHKFVG 451 500 ENSP00000355802/1-455 VLERQ ENSBTAP00000000159/1-451 LQERQ ENSTTRP00000009622/1-451 LLERQ bmy_10527T0/1-346 ----- BACU019665/1-451 LLERQ