KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:36 2014 Check: 00 .. Name: ENSTTRP00000010141/1-736 Len: 817 Check: 422 Weight: 1.00 Name: bmy_06969T0/1-387 Len: 817 Check: 5356 Weight: 1.00 Name: ENSBTAP00000000169/1-641 Len: 817 Check: 9399 Weight: 1.00 Name: ENSP00000350552/1-744 Len: 817 Check: 1178 Weight: 1.00 Name: BACU000900/1-735 Len: 817 Check: 1864 Weight: 1.00 // 1 50 ENSTTRP00000010141/1-736 ------HPGA WGDGSRPQWR GSPESWIERC LNESENKRYS SHTSLGNVSN bmy_06969T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000169/1-641 ---------- ---------- ---MSW---- ---------- --AAFG---- ENSP00000350552/1-744 MIKRRAHPGA GGDRTRPRRR RSTESWIERC LNESENKRYS SHTSLGNVSN BACU000900/1-735 -----MHCGL LEEPDMD--- -STESWIERC LNESENKRYS SHTSLGNVSN 51 100 ENSTTRP00000010141/1-736 DENEEKENNR ASKPHSTPAT LQWLEENYEI AEGVCIPRSA LYMHYLDFCE bmy_06969T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000169/1-641 ---------- -GSEFFIPAG IQ-IEAQCPL SRSIT----- ---------- ENSP00000350552/1-744 DENEEKENNR ASKPHSTPAT LQWLEENYEI AEGVCIPRSA LYMHYLDFCE BACU000900/1-735 DENEEKENNR ASKPHSTPAT LQWLEENYEI AEGVCIPRSA LYMHYLDFCE 101 150 ENSTTRP00000010141/1-736 KNDTQPVNAA SFGKIIRQQF PQLTTRRLGT RGQSKYHYYG IAVKESSQYY bmy_06969T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000169/1-641 ---------- ---------- ---------- ---EWYHYYG IAVKESSQYY ENSP00000350552/1-744 KNDTQPVNAA SFGKIIRQQF PQLTTRRLGT RGQSKYHYYG IAVKESSQYY BACU000900/1-735 KNDTQPVNAA SFGKIIRQQF PQLTTRRLGT RGQSKYHYYG IAVKESSQYY 151 200 ENSTTRP00000010141/1-736 DVMYSKKGAA WVSETGKKEV SKQTVAYSPR SKLGTLLPEF PNVKDLNLPA bmy_06969T0/1-387 ---------- ---------- ------MSRK CRTGDVGMEL CGHKD----- ENSBTAP00000000169/1-641 DVMYSKKGAA WVSETGKKEV SKQTVAYSPR SKLGTLLPEF PNVKDLNLPA ENSP00000350552/1-744 DVMYSKKGAA WVSETGKKEV SKQTVAYSPR SKLGTLLPEF PNVKDLNLPA BACU000900/1-735 DVMYSKKGAA WVSETGKKEV SKQTVAYSPR SKLGTLLPEF PNVKDLNLPA 201 250 ENSTTRP00000010141/1-736 SLPEEKVSTF IMMYRTHCQR ILDTVIRANF DEVQSFLLHF WQGMPPHMLP bmy_06969T0/1-387 ---------- ---------- ---------- --------HR WRQAP----- ENSBTAP00000000169/1-641 SLPEEKVSTF IMMYRTHCQR ILDTVIRANF DEVQSFLLHF WQGMPPHMLP ENSP00000350552/1-744 SLPEEKVSTF IMMYRTHCQR ILDTVIRANF DEVQSFLLHF WQGMPPHMLP BACU000900/1-735 SLPEEKVSTF IMMYRTHCQR ILDTVIRANF DEVQSFLLHF WQGMPPHMLP 251 300 ENSTTRP00000010141/1-736 VLGSSTVVNI VGVCDSILYK AISGVLM-TV LQALPD-LTQ VIRKFAKQLD bmy_06969T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000169/1-641 VLGSSTVVNI VGVCDSILYK AISGVLMPTV LQALPDSLTQ VIRKFAKQLD ENSP00000350552/1-744 VLGSSTVVNI VGVCDSILYK AISGVLMPTV LQALPDSLTQ VIRKFAKQLD BACU000900/1-735 VLGSSTVVNI VGVCDSILYK AISGVLMPTV LQALPDSLTQ VIRKFAKQLD 301 350 ENSTTRP00000010141/1-736 EWLKVALHDL PENLRNIKFE LSRRFSQILR RQTSLNHLCQ ASRTVIHSAD bmy_06969T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000169/1-641 EWLKVALHDL PENLRNIKFE LSRRFSQILR RQTSLNHLCQ ASRTVIHSAD ENSP00000350552/1-744 EWLKVALHDL PENLRNIKFE LSRRFSQILR RQTSLNHLCQ ASRTVIHSAD BACU000900/1-735 EWLKVALHDL PENLRNIKFE LSRRFSQILR RQTSLNHLCQ ASRTVIHSAD 351 400 ENSTTRP00000010141/1-736 ITFQMLEDWR NVDLNSITKQ TLYTMEDTRD EHRKLIIQLY QEFDHLLEEQ bmy_06969T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000169/1-641 ITFQMLEDWR NVDLNSITKQ TLYTMEDTRD EHRKLIIQLY QEFDHLLEEQ ENSP00000350552/1-744 ITFQMLEDWR NVDLNSITKQ TLYTMEDSRD EHRKLITQLY QEFDHLLEEQ BACU000900/1-735 ITFQMLEDWR NVDLNSITKQ TLYTMEDTRD EHRKLIIQLY QEFDHLLEEQ 401 450 ENSTTRP00000010141/1-736 SPIESYIEWL DTMVDRCVVK VAAKRQGSLK KVAQQFLLMW SCFGTRVIRD bmy_06969T0/1-387 ---------- ---------- ----ERG--- ---------- ---------- ENSBTAP00000000169/1-641 SPIESYIEWL DTMVDRCVVK VAAKRQGSLK KVAQQFLLMW SCFGTRVIRD ENSP00000350552/1-744 SPIESYIEWL DTMVDRCVVK VAAKRQGSLK KVAQQFLLMW SCFGTRVIRD BACU000900/1-735 SPIESYIEWL DTMVDRCVVK VAAKRQGSLK KVAQQFLLMW SCFGTRVIRD 451 500 ENSTTRP00000010141/1-736 MTLHSAPSFG SFHLIHLMFD DYVLYLLESL HCQERASELM RAMKGEGSTA bmy_06969T0/1-387 ---------G SFHLIHLMFD DYVLYLLESL HSQERASELM RAMKGEGSTA ENSBTAP00000000169/1-641 MTLHSAPSFG SFHLIHLMFD DYVLYLLESL HCQERANELM RAMKGEGSTA ENSP00000350552/1-744 MTLHSAPSFG SFHLIHLMFD DYVLYLLESL HCQERANELM RAMKGEGSTA BACU000900/1-735 MTLHSAPSFG SFHLIHLMFD DYVLYLLESL HSQERASELM RAMKGEGSTA 501 550 ENSTTRP00000010141/1-736 EVREEIILTE AAPPTPSPVP SFSPAKSATS VEVPPPSSPV SNPSPEYTGL bmy_06969T0/1-387 EVREEIILTE AAPPTPSPVP SFSPAKSATS VEVPPPSSPV SNPSPEYTGL ENSBTAP00000000169/1-641 EVREEIILTE AAPPTPSPVP SFSPAKSAAS VEVPPPSSPV SNPSPEYTGL ENSP00000350552/1-744 EVREEIILTE AAAPTPSPVP SFSPAKSATS VEVPPPSSPV SNPSPEYTGL BACU000900/1-735 EVREEIILTE AAPPTPSPVP SFSPAKSATS VEVPPPSSPV SNPSPEYTGL 551 600 ENSTTRP00000010141/1-736 STTX------ ---------- ---------- ---------- ---------- bmy_06969T0/1-387 STTGWYLLIV FKSQREKERH IKHPKPPDAW PVLIGYVRVC GNAMRRDWVK ENSBTAP00000000169/1-641 STTG------ ---------- ---------- ---------- ---------- ENSP00000350552/1-744 STTG------ ---------- ---------- ---------- ---------- BACU000900/1-735 STTG------ ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000010141/1-736 ---------- ---------- -------XXX XXXXXXXXXX XXXXXXXXXX bmy_06969T0/1-387 GSISTDFHKS LALPRYPIKK QINGINRAMQ SYTWSLTYTV TTAAGSPAEN ENSBTAP00000000169/1-641 ---------- ---------- -------AMQ SYTWSLTYTV TTAAGSPAEN ENSP00000350552/1-744 ---------- ---------- -------AMQ SYTWSLTYTV TTAAGSPAEN BACU000900/1-735 ---------- ---------- -------AMQ SYTWSLTYTV TTAAGSPAEN 651 700 ENSTTRP00000010141/1-736 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XYTGSYNYGS YGNQHPPPMQ bmy_06969T0/1-387 SQQLPCMRST HVPSSSVTHR IPVYPHRDEH GYTGSYNYGS YGNQHPPPMQ ENSBTAP00000000169/1-641 SQQLPCMRST HVPSSSVTHR IPVYPHREEH GYTGSYNYGS YGNQHPPPMQ ENSP00000350552/1-744 SQQLPCMRNT HVPSSSVTHR IPVYPHREEH GYTGSYNYGS YGNQHPHPMQ BACU000900/1-735 SQQLPCMRST HVPSSSVTHR IPVYPHRDEH GYTGSYNYGS YGNQHPPPMQ 701 750 ENSTTRP00000010141/1-736 SQYPALPHDT AISGPLHYSP YHRSSAQYPF NSPTSRMEPC LMSSTPRLHP bmy_06969T0/1-387 SQYPALPHDT AISGPLHYSP YHRSSAQYPF NSPTSRMEPC LMSSTPRLHP ENSBTAP00000000169/1-641 SQYPALPHDT AISGPLHYSP YHRSSAQYPF NSPTSRMEPC LMSSTPRLHP ENSP00000350552/1-744 SQYPALPHDT AISGPLHYAP YHRSSAQYPF NSPTSRMEPC LMSSTPRLHP BACU000900/1-735 SQYPALPHDT AISGPLHYSP YHRSSAQYPF NSPTSRMEPC LMSSTPRLHP 751 800 ENSTTRP00000010141/1-736 TPVTPRWPEV PTANTCYTSP SVHSTRYGNS SDMYTPLTTR RNSEYEHMQH bmy_06969T0/1-387 TPVTPRWPEV PTANTCYTSP SVHSTRYGNS SDMYTPLTTR RNSEYEHMQH ENSBTAP00000000169/1-641 TPVTPRWPEV PTANTCYTSP SVHSTRYGNS SDMYTPLTTR RNSEYEHMQH ENSP00000350552/1-744 TPVTPRWPEV PSANTCYTSP SVHSARYGNS SDMYTPLTTR RNSEYEHMQH BACU000900/1-735 TPVTPRWPEV PTANTCYTSP SVHSTRYGNS SDMYTPLTTR RNSEYEHMQH 801 850 ENSTTRP00000010141/1-736 FPGFAYINGE ASTGWAK bmy_06969T0/1-387 FPGFAYINGE ASTGWAK ENSBTAP00000000169/1-641 FPGFAYINGE ASTGWAK ENSP00000350552/1-744 FPGFAYINGE ASTGWAK BACU000900/1-735 FPGFAYINGE ASTGWAK