KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:37 2014 Check: 00 .. Name: ENSP00000415434/1-1247 Len: 1248 Check: 4702 Weight: 1.00 Name: ENSBTAP00000000172/1-1233 Len: 1248 Check: 6834 Weight: 1.00 Name: ENSTTRP00000004120/1-1165 Len: 1248 Check: 7911 Weight: 1.00 Name: bmy_19569T0/1-894 Len: 1248 Check: 3740 Weight: 1.00 Name: BACU010991/1-781 Len: 1248 Check: 8593 Weight: 1.00 // 1 50 ENSP00000415434/1-1247 MSLFLRVVFS FTMFGDLFEE EYSTVSNNQY GKGKKLKTKA LEPPAPREFT ENSBTAP00000000172/1-1233 ---------- --MFGDLFEE DYSSVSNNN- GKGKRLKTKA LEPPAPREFT ENSTTRP00000004120/1-1165 ---------- ---------- ---------- ---------- ---------- bmy_19569T0/1-894 ---------- --MFGDLFEE DYSSVSNDHY GKGKKLKTKA LEPPAPRGFT BACU010991/1-781 ---------- --MFGDLFEE DYSSVSNDHY GKGKKLKTKA LELPAPRGFT 51 100 ENSP00000415434/1-1247 NLSGIRNQGG TCYLNSLLQT LHFTPEFREA LFSLGPEELG LFEDKDKPDA ENSBTAP00000000172/1-1233 NLSGIRNQGG TCYLNSLLQT LHFTPEFREA LFSLGLEELG SLEDKDKPDA ENSTTRP00000004120/1-1165 ---------- ---------- ---------- LFSLGPEELG SLEDKDKPDA bmy_19569T0/1-894 NLSGIRNQGG TCYLNSLLQT LHFTPEFREA LFSLGPEELG SLEDKDKPDA BACU010991/1-781 NLSGIRNQGG TCYLNSLLQT LHFTPEFREA LFSLGPEELG SLEDKDKPDA 101 150 ENSP00000415434/1-1247 KVRIIPLQLQ RLFAQLLLLD QEAASTADLT DSFGWTSNEE MRQHDVQELN ENSBTAP00000000172/1-1233 KVRIIPLQLQ RLFAQLLLLD QKAVSTADLT DSFGWTSDEE MRQHDVQELN ENSTTRP00000004120/1-1165 KVRIIPLQLQ RLFAQLLLLD QEAASTTDLT DSFGWTSDEE MRQHDVQELN bmy_19569T0/1-894 KVRIIPLQLQ RLFAQLLLLD QEAASTADLT DSFGWTSDEE MRQHDVQELN BACU010991/1-781 KVRIIPLQLQ RLFAQLLLLD QEAASTADLT DSFGWTSDEE MRQHDVQELN 151 200 ENSP00000415434/1-1247 RILFSALETS LVGTSGHDLI YRLYHGTIVN QIVCKECKNV SERQEDFLDL ENSBTAP00000000172/1-1233 RILFSALETS LVGTSGHDLI NRLYHGTIVN QIVCKECKNV SEKQEDFLDL ENSTTRP00000004120/1-1165 RILFSALETS LVGTSGHDLI NRLYHGTIVN QIVCKECKNV SEKQEDFLDL bmy_19569T0/1-894 RILFSALETS LVGTSGHDLI NRLYHGTIVN QIVCKECKNV SEKQEDFLDL BACU010991/1-781 RILFSALETS LVGTSGHDLI NRLYHGTIVN QIVCKECKNV SEKQEDFLDL 201 250 ENSP00000415434/1-1247 TVAVKNVSGL EDALWNMYVE EEVFDCDNLY HCGTCDRLVK AAKSAKLRKL ENSBTAP00000000172/1-1233 TVAVKNVSGL EDALWNMYVE EEVFDCDNLY HCGNCDRLVK AAKSAKLRKL ENSTTRP00000004120/1-1165 TVAVRNVSGL EDALWNMYVE EEVFDYDNLY HCGTCDRLVK AAKSAKLRKL bmy_19569T0/1-894 TVAVRNVSGL GDALWNMYVE EEVFDSDNLY HCGTCDRLVK AAKSAKLRKL BACU010991/1-781 TVAVRNVSGL GDALWDMYVE EEVFDSDNLY HCGTCDRLVK AAKSAKLRKL 251 300 ENSP00000415434/1-1247 PPFLTVSLLR FNFDFVKCER YKETSCYTFP LRINLKPFCE QSELDDLEYI ENSBTAP00000000172/1-1233 PPFLTISLLR FNFDFVKCER YKETSCYTFP LRINLKPFCE QSELDDLEYM ENSTTRP00000004120/1-1165 PPFLTFSLLR FNFDFVKCER YKETSCYTFP LRINLKPFCE QSELDDLEYM bmy_19569T0/1-894 PPFLTFSLLR FNFDFVKCER YKETSCYTFP LRINLKPFCE QSELDDLEYM BACU010991/1-781 PPFLTFSLLR FNFDFVKCER YKETSCYTFP LRINLKPFCE QSELDDLEYM 301 350 ENSP00000415434/1-1247 YDLFSVIIHK GGCYGGHYHV YIKDVDHLGN WQFQEEKSKP DVNLKDLQSE ENSBTAP00000000172/1-1233 YDLFSVIIHK GGCYGGHYHV YIKDVDHLGN WQFQEDKSKP DVNLEDIQNK ENSTTRP00000004120/1-1165 YDLFSVIIHK GGCYGGHYHV YIKDVDHLGN WQFQEDKSNP DVNLEDLQN- bmy_19569T0/1-894 YDLFSVIIHK GGCYGGHYHV YIKDVDHLGN WQFQEDKSNP DVNLEDLQNE BACU010991/1-781 YDLFSVIIHK GGCYGGHYHV YIKDVDHLGN WQFQEDKSNP DVNLEDLQNE 351 400 ENSP00000415434/1-1247 EEIDHPLMIL KAILLE-ENN LIPVDQLGQK LLKKIGISWN KKYRKQHGPL ENSBTAP00000000172/1-1233 EEVDDPLMIL KAILLQEESN LIPVDQLGQK LLKKIGISWN KKYRKQYGPL ENSTTRP00000004120/1-1165 EEIDDPLMIL KAVLLQ-ESN LIPVDQLGQK LLKKIGISWN KKYRKQYGPL bmy_19569T0/1-894 EEIDDPLMIL KAVLLQEESN LIPVDQLGQK LLKKIGVSWN KKYRKQYGPL BACU010991/1-781 EEIDDPLMIL KAVLLQEESN LIPVDQLGQK LLKKIGISWN KKYRKQYGPL 401 450 ENSP00000415434/1-1247 RKFLQLHSQI FLLSSDESTV RLLKNSSLQA ESDFQRNDQQ IFKMLPPESP ENSBTAP00000000172/1-1233 RKFLQVHSQI FLLSSDESTV RLLKDSSLQA ESDIQRNDQR LFKTLTSESL ENSTTRP00000004120/1-1165 RKFLQLHSQI FLLSSDESTV SLLKDCSLQT ESDIRRNDQQ LLKTLTSEPP bmy_19569T0/1-894 RKFLQLHSQI FLLSSDESTV SLLKDCSLQA ESDIRGNDQQ LLKTLTSEPP BACU010991/1-781 RKFLQLHSQI FLLSSDESTV SLLKDWSLQA ESDVRGNDPQ LLKTLTSEPP 451 500 ENSP00000415434/1-1247 GLNNSISCPH WFDINDSKVQ PIREKDIEQQ FQGKESAYML FYRKSQLQRP ENSBTAP00000000172/1-1233 TLNDRPSCPH WFDINDSTVQ PIKEKDIEQQ FQGKESAYML FYRKSQLQRP ENSTTRP00000004120/1-1165 GLNDRPSCPH WFDVNDSQVQ PIKEEDIEQQ FQGKESAYML FYRKSQLQRP bmy_19569T0/1-894 GLNDRPFCPH WFDINDSRVQ PIKEKDIEQQ FQGKESAYML FYRKSQLQRP BACU010991/1-781 GLNDRPSCPH WFDINDSRVQ PIKEKDIEQQ FQGKESAYML FYRKSQLQRP 501 550 ENSP00000415434/1-1247 PEARANPRYG VPCHLLNEMD AANIELQTKR AECDSANNTF ELHLHLGPQY ENSBTAP00000000172/1-1233 PEARANPRYK VPCHLLSEMD AANIELQIKR AECDSTNNTI ELHLHLGPHY ENSTTRP00000004120/1-1165 PEARANPRYR VPCHLLNEMD AANIELQIKR AECDSTNNNF ELHLHLGPYY bmy_19569T0/1-894 PEARANPRYR VPCHLLNEMD AANIELQIKR AECDSTNNNF ELHLHLGPHY BACU010991/1-781 PEARANPRYR VPCHLLNEMD AANIKLHIKR AECDSTNNNF ELHLHLGPHY 551 600 ENSP00000415434/1-1247 HFFNGALHPV VSQTESVWDL TFDKRKTLGD LRQSIFQLLE FWEGDMVLSV ENSBTAP00000000172/1-1233 HFFNGALHPV VSQTESMWDL TFDKRKTLGD LRQSIFQLLE FWEGDMVLSV ENSTTRP00000004120/1-1165 HFFNGALHPV VSQTESMWDL TFDKRKTLGD LRQSIFQLLE FWEGDMVLSV bmy_19569T0/1-894 HFFNGALHPV VSQTESMWDL TFDKRKTLGD LRQSIFQLLE FWEGDMVLSV BACU010991/1-781 HFFNGALHPV VSQTESMWDL TFDKRKTLGD LRQSIFQLLE FWEGDMVLSV 601 650 ENSP00000415434/1-1247 AKLVPAGLHI YQSLGGDELT LCETEIADGE DIFVWNGVEV GGVHIQTGID ENSBTAP00000000172/1-1233 AKFVPAGLHV CQTLNGDDLA LCEIEITDGE DIFVWNGVEV GGIQIPTGSD ENSTTRP00000004120/1-1165 AKFVPAGLHV YQTLDGDHLT LCEIEIADGE DIFVWNGVEV GGIQIPAGSD bmy_19569T0/1-894 AKFVPAGLHV YQTLDGDHLT LCEIEIADGE DIFVWNGVEV GGIQIPAGSD BACU010991/1-781 AKFVPAGLHV YQTLDGDHLT LCEIEIADGE DIFVWNGVEV GGIQIPAGSD 651 700 ENSP00000415434/1-1247 CEPLLLNVLH LDTSSDGEKC CQVIESPHVF PANAEVGTVL TALAIPAGVI ENSBTAP00000000172/1-1233 CEPLLLNVLH VATSSEGEEC QQLIESPHVF PSNAEIGTVF TALAIPEGVI ENSTTRP00000004120/1-1165 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXEIGSVF TACAIPDGVI bmy_19569T0/1-894 CEPLLLNVLH PATSNEEEEC QQLIDSPHVF PSNAEIGSVF TAFAIPDGVI BACU010991/1-781 CEPLLLNVLH PATSNEEEEC QQLIDSPHVF PSNAEIGSVF TTFAIPDGVI 701 750 ENSP00000415434/1-1247 FINSAGCPGG EGWTAIPKED MRKTFREQGL RNGSSILIQD SHDDNSLLTK ENSBTAP00000000172/1-1233 LINNTESRGG ESWITIPKED LKKTFREQGL RNGSSVLIQG SNNGNSLLTK ENSTTRP00000004120/1-1165 -VNSAESVGE ESWTTIPKED LKKTFREQGL RNGSSILIQD SNDGNSLLTK bmy_19569T0/1-894 LVNNTESVGE ESWTTIPKED LRKTFREQGL RNGSSILIQD SNDGNSLLTK BACU010991/1-781 LVNNTESVGE ESWTTIPKED LKKTFREQGL RNGSSILIQD SNDGNSLLTK 751 800 ENSP00000415434/1-1247 EEKWVTSMNE IDWLHVKNLC QLESEEKQVK ISATVNTMVF DIRIKAIKEL ENSBTAP00000000172/1-1233 QGKWIDTVNE INWLQVRNLS QLESEEEQVK ISATLNTVVF DIRIKAIKEL ENSTTRP00000004120/1-1165 RGKWITSVNE VDWLQVKNLC QLDSEEEQVK ISATLNTVVF DIRIKAIKEL bmy_19569T0/1-894 QGKWITSVNE IDWLQVKNLC QLDSEEEQVK ISATLNTVVF DIRIKAIKEL BACU010991/1-781 QGKWITSVNE IDWLQVKNLC QLDSEEEQVK ISATLNT--- ---------- 801 850 ENSP00000415434/1-1247 KLMKELADNS CLRPIDRNGK LLCPVPDSYT LKEAELKMGS SLGLCLGKAP ENSBTAP00000000172/1-1233 KLLKELAENS CLRPIDRNGK LLCPVPDRCT LKEAGLKMGS SLGLCPGKAP ENSTTRP00000004120/1-1165 KLMKELAEDS CLRPIDRDGK LLCPVPDNYT LKEAELKMGS SLGLCPGKAP bmy_19569T0/1-894 KLMKELAEDS CLRPIDRNGK LLCPVPDNYT LKEAELKMGS SLGLCPGKAP BACU010991/1-781 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000415434/1-1247 SSSQLFLFFA MGSDVQPGTE MEIVVEETIS VRDCLKLMLK KSGLQGDAWH ENSBTAP00000000172/1-1233 TSSQLFLFFA LGSDVHPGTE MEIIVEETIS VRDCLKIMLD KCGLTGETWH ENSTTRP00000004120/1-1165 TSSQLFLFFA VGSDVQPGTE MEIIVEETIS VRDCLKVMLE KSGLSGDAWH bmy_19569T0/1-894 TSSQLFLFFA VGSDVQPGTE MEIIVEETIS VRDVRNFTLG GRSL------ BACU010991/1-781 ---------- ---------- ---------- ---CQTIIL- ---------- 901 950 ENSP00000415434/1-1247 LRKMDWCYEA GEPLCEEDAT LKELLICSGD TLLLIEGQLP PLGFLKVPIW ENSBTAP00000000172/1-1233 LRKMDWCFEA GEPLCEEDAK LKELMICSGD TLLLIEGKLP PLGFLTVPIW ENSTTRP00000004120/1-1165 LRKMDWCYEA GEALWEEDAA LKELMLSSGD TLLLIEGKLP PLGFLKVPIW bmy_19569T0/1-894 -----WVFGM GSS------- ---------- ---------- ---------- BACU010991/1-781 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000415434/1-1247 WYQLQGPSGH WESHQDQTNC TSSWGRVWRA TSSQGASGNE PAQVSLLYLG ENSBTAP00000000172/1-1233 WYQPQGPLHH WKDHQDQTNC TLSQGSVWKA SSTPGAPSDA HAEVSLWYLG ENSTTRP00000004120/1-1165 WYQPRGTLHH WKSHQDQTNC TFSQGGVWRA NSIQDAPSDA HAEVSLRYLG bmy_19569T0/1-894 ---------- ---------- ---------- ---------- ---------- BACU010991/1-781 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000415434/1-1247 DIEISEDATL AELKSQAMTL PPFLEFGVPS PAHLRAWTVE RKRPGRLLRT ENSBTAP00000000172/1-1233 DLEISEDATL GELKSQAMTL PS-LEFSIPS PAFLRAWTVE NKRPGRLLRG ENSTTRP00000004120/1-1165 DVEISEDATL GELKSQAMTL PSFSEFSIPS PAFLRAWTVE SRRPGRLLRV bmy_19569T0/1-894 ---------- ---------- ---------- ---------- ---------- BACU010991/1-781 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000415434/1-1247 DRQPLREYKL GRRIEICLEP LQKGENLGPQ DVLLRTQVRI PGERTYAPAL ENSBTAP00000000172/1-1233 HQQQLKEYKL GKRTEICLEP LQKEENLGPW DVLLRTQMRL PGKRAYGPPV ENSTTRP00000004120/1-1165 HYQRLREYKL GQRTEICLEP LQKEENLGPQ HVLLRTQMRL PGKRAYALPV bmy_19569T0/1-894 ---------- ---------- ---------- ---------- ---------- BACU010991/1-781 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000415434/1-1247 DLVWNAAQGG TAGSLRQRVA DFYRLPVEKI EIAKYFPEKF EWLPISSWNQ ENSBTAP00000000172/1-1233 DVLWDTARGW TASSLRQRVA DVYSLPVEKI EIAKYFPDKF AWLPVSSWSQ ENSTTRP00000004120/1-1165 DLVWDTARGW TAGSLRHRVA DFYSLPVEKI EIAKYLPEKF EWLPVPSWNQ bmy_19569T0/1-894 ---------- ---------- ---------- ---------- ---------- BACU010991/1-781 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000415434/1-1247 QITKRKKKKK QDYLQGAPYY LKDGDTIGVK NLLIDDDDDF STIRDDTGKE ENSBTAP00000000172/1-1233 QTTKRKKKKK QDNLQGAPYY LKDGDTIGVK NLLVEDDDDF STVQDDIGRE ENSTTRP00000004120/1-1165 QITKRKKKKK QDNLQGAPYH LKDGDTIGIK NLLVEDDDDF STVRDDIGRE bmy_19569T0/1-894 ---------- ---------- ---------- ---------- ---------- BACU010991/1-781 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSP00000415434/1-1247 KQKQRALGRR KSQEALHEQS SYILSSAETP ARPRAPETSL SIHVGSFR ENSBTAP00000000172/1-1233 KLKEVALGKR KSREALRAQS SDV-SSVEMP AQARGPEASL SIHVGSFR ENSTTRP00000004120/1-1165 KQKAFALGRK KRQEALRVRS GDVPSAAEMP PRPRGPEASL SIHVGSFR bmy_19569T0/1-894 ---------- ---------- ---------- ---------- ----GNLC BACU010991/1-781 ---------- ---------- ---------- ---------- --------