KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:10:42 2014 Check: 00 .. Name: ENSP00000310301/1-781 Len: 844 Check: 2336 Weight: 1.00 Name: bmy_07640T0/1-534 Len: 844 Check: 2232 Weight: 1.00 Name: ENSTTRP00000016115/1-781 Len: 844 Check: 7852 Weight: 1.00 Name: ENSBTAP00000000201/1-689 Len: 844 Check: 6997 Weight: 1.00 // 1 50 ENSP00000310301/1-781 MTAPEKPVKQ EEMAALDVDS GGGGGGGGGH GEYLQQQQQH GNGAVAAAAA bmy_07640T0/1-534 ---------- --MAALDVDS ----GGGGGH GEYL-QQQQH GNGAV-AAAA ENSTTRP00000016115/1-781 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000201/1-689 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000310301/1-781 AQDTQPSPLA LLAAT----- ---------- ---------- ---------- bmy_07640T0/1-534 AQDTQPSPLA LLAAT----- ---------- ---------- ---------- ENSTTRP00000016115/1-781 ---------- ---MTXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000000201/1-689 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000310301/1-781 ---------- ---------- --------CS KIGPPSPGDD EEEAAAAAGA bmy_07640T0/1-534 ---------- ---------- --------CS KIGPPSPGDD EEEAAAAAGA ENSTTRP00000016115/1-781 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXGPPSPGDD EEEAAAAAGA ENSBTAP00000000201/1-689 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000310301/1-781 PAAAGATGDL ASAQLGGAPN RWEVLSATPT TIKDEAGNLV QIPSAATSSG bmy_07640T0/1-534 PAAAGATGDL ASAQLGGAPN RWEVLSATPT TIKDEAGNLV QIPSAATSSG ENSTTRP00000016115/1-781 PAAAGATGDL ASAQLGGAPN RWEVLSATPT TIKDEAGNLV QIPSAATSSG ENSBTAP00000000201/1-689 -----QTGDL ASAQLGGAPN RWEVLSATPT TIKDEAGNLV QIPSAATSSG 201 250 ENSP00000310301/1-781 QYVLPLQNLQ NQQIFSVAPG SDSSNGTVSS VQYQVIPQIQ SADGQQVQIG bmy_07640T0/1-534 QYVLPLQNLQ NQQIFSVAPG SDSSNGTVSN VQYQVIPQIQ SSDGQQVQIG ENSTTRP00000016115/1-781 QYVLPLQNLQ NQQIFSVAPG SDSSNGTVSN VQYQVIPQIQ SSDGQQVQIG ENSBTAP00000000201/1-689 QYVLPLQNLQ NQQIFSVAPG SDSSNGTVSN VQYQVIPQIQ SSDGQQVQIG 251 300 ENSP00000310301/1-781 FTGSSDNGGI NQESSQIQII PGSNQTLLAS GTPSANIQNL IPQTGQVQVQ bmy_07640T0/1-534 FTGSSDNGGI NQEGGQIQII PGSNQTLLAS GTPPANIQNL IPQTGQVQVQ ENSTTRP00000016115/1-781 FTGSSDNGGI NQESGQIQII PGSNQTLLAS GTPPANIQNL IPQTGQVQVQ ENSBTAP00000000201/1-689 FTGSSDNGGI NQESGQIQII PGSNQTLLAS GTPPANIQNL IPQTGQVQVQ 301 350 ENSP00000310301/1-781 GVAIGGSSFP GQTQVVANVP LGLPGNITFV PINSVDLDSL GLSGSSQTMT bmy_07640T0/1-534 GVAIGGSSFP GQTQVVANVP LGLPGNITFV PINSVDLDSL GLSGSSQTMT ENSTTRP00000016115/1-781 GVAIGGSSFP GQTQVVANVP LGLPGNITFV PINSVDLDSL GLSGSSQTMT ENSBTAP00000000201/1-689 GVAIGGSSFP GQTQVVANVP LGLPGNITFV PINSVDLDSL GLSGSSQTMT 351 400 ENSP00000310301/1-781 AGINADGHLI NTGQAMDSSD NSERTGERVS PDINETNTDT DLFVPTSSSS bmy_07640T0/1-534 AGINADGHLI NTGQAMDSSD NSERTGERVS PDINETNTDT DLFVPTSSSS ENSTTRP00000016115/1-781 AGINADGHLI NTGQAMDSSD NSERTGERVS PDINETNTET DLFVPTSSSS ENSBTAP00000000201/1-689 AGINADGHLI NTGQAMDSSD NSERTGERVS PDINETNTDT DLFVPTSSSS 401 450 ENSP00000310301/1-781 QLPVTIDSTG ILQQNTNSLT TSSGQVHSSD LQGNYIQSPV SEETQAQNIQ bmy_07640T0/1-534 QLPVTIDSTG ILQQNTNSLT TTSGQVHSSD LQGNYIQSPV SEETQAQNIQ ENSTTRP00000016115/1-781 QLPVTIDSTG ILQQNTNSLT TTSGQVHSSD LQGNYIQSPV SEETQAQNIQ ENSBTAP00000000201/1-689 QLPVTIDSTG ILQQNTNSLT TTSGQVHSSD LQGNYIQSPV SEETQAQNIQ 451 500 ENSP00000310301/1-781 VSTAQPVVQH LQLQESQQPT SQAQIVQGIT PQTIHGVQAS GQNISQQALQ bmy_07640T0/1-534 VSTAQPVVQH LQLQESQQPT SQAQIVQGIT PQTIHGVQAS GQNISQQALQ ENSTTRP00000016115/1-781 VSTAQPVVQH LQLQESQQPT SQAQIVQGIT PQTIHGVQAS GQNISQQALQ ENSBTAP00000000201/1-689 VSTAQPVVQH LQLQESQQPT SQAQIVQGIT PQTIHGVQAS GQNITQQALQ 501 550 ENSP00000310301/1-781 NLQLQLNPGT FLIQAQTVTP SGQVTWQTFQ VQGVQNLQNL QIQNTAAQQI bmy_07640T0/1-534 NLQLQLNPGT FLIQAQTVTP SGQITWQTFQ VQGVQNLQNL QIQNTAAQQI ENSTTRP00000016115/1-781 NLQLQLNPGT FLIQAQTVTP SGQITWQTFQ VQGVQNLQNL QIQNTAAQQI ENSBTAP00000000201/1-689 NLQLQLNPGT FLIQAQTVTP SGQITWQTFQ VQGVQNLQNL QIQNTAAQQI 551 600 ENSP00000310301/1-781 TLTPVQTLTL GQVAAGGAFT STPVSLSTGQ LPNLQTVTVN SIDSAGIQLH bmy_07640T0/1-534 TLTPVQTLTL GQVAAGGALT STPVSLSTGQ LPNLQTVTVN SIDSTGIQLH ENSTTRP00000016115/1-781 TLTPVQTLTL GQVAAGGALT STPVSLSTGQ LPNLQTVTVN SIDSTGIQLH ENSBTAP00000000201/1-689 TLTPVQTLTL GQVAAGGALS STPVSLSTGQ LPNLQTVTVN SIDSTGIQLH 601 650 ENSP00000310301/1-781 PGENADSPAD IRIKEEEPDP EEWQLSGDST LNTNDLTHLR VQVVDEEGDQ bmy_07640T0/1-534 PGENADSPAV YLIYD----- ---------- ---------- ---------- ENSTTRP00000016115/1-781 PGENADSPAD IRIKEEEPDP EEWQLSGDST LNTNDLTHLR VQVVDEEGDQ ENSBTAP00000000201/1-689 PGENADSPAD IRIKEEEPDP EEWQLSGDST LNTNDLTHLR VQVVDEEGDQ 651 700 ENSP00000310301/1-781 QHQEGKRLRR VACTCPNCKE GGGRGTNLGK KKQHICHIPG CGKVYGKTSH bmy_07640T0/1-534 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016115/1-781 QHQEGKRLRR VACTCPNCKE GGGRGTNLGK KKQHICHIPG CGKVYGKTSH ENSBTAP00000000201/1-689 QHQEGKRLRR VACTCPNCKE GGGRGTNLGK KKQHICHIPG CGKVYGKTSH 701 750 ENSP00000310301/1-781 LRAHLRWHSG ERPFVCNWMY CGKRFTRSDE LQRHRRTHTG EKKFVCPECS bmy_07640T0/1-534 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016115/1-781 LRAHLRWHSG ERPFICNWMF CGKRFTRSDE LQRHRRTHTG EKKFVCPECS ENSBTAP00000000201/1-689 LRAHLRWHSG ERPFICNWMF CGKRFTRSDE LQRHRRTHTG EKKFVCPECS 751 800 ENSP00000310301/1-781 KRFMRSDHLA KHIKTHQNKK GIHSSSTVLA SVEAARDDTL ITAGGTTLIL bmy_07640T0/1-534 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016115/1-781 KRFMRSDHLA KHIKTHQNKK GIHSSSTVLA SVEAARDDTL ITAGGTTLIL ENSBTAP00000000201/1-689 KRFMRSDHLA KHIKTHQNKK GIHSSSTVLA SVEAARDDTL ITAGGTTLIL 801 850 ENSP00000310301/1-781 ANIQQGSVSG IGTVNTSATS NQDILTNTEI PLQLVTVSGN ETME bmy_07640T0/1-534 ---------- ---------- ---------- ---------- ---- ENSTTRP00000016115/1-781 ANIQQGSVSG IGTVNTSTTS NQDILTNTEI PLQLVTVSGN ETME ENSBTAP00000000201/1-689 ANIQQGSVSG IGTVNTSTTS NQDILTNTEI PLQLVTVSGN ETME