KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:43 2014 Check: 00 .. Name: ENSP00000364621/1-255 Len: 323 Check: 6811 Weight: 1.00 Name: bmy_04154T0/1-314 Len: 323 Check: 7320 Weight: 1.00 Name: ENSBTAP00000000206/1-256 Len: 323 Check: 941 Weight: 1.00 Name: BACU009575/1-257 Len: 323 Check: 1548 Weight: 1.00 Name: ENSTTRP00000000295/1-250 Len: 323 Check: 8064 Weight: 1.00 // 1 50 ENSP00000364621/1-255 MRWAAATLRG KARPRGRAGV TTPAP--GNR TGTCAKLRLP PQATFQVLRG bmy_04154T0/1-314 --MTPVPGEG SCQAPALQGE VLTLPLLSSL LGMCVQVQPP LQGTFQVLRG ENSBTAP00000000206/1-256 MRGAAATLRR RARPGGRKGN AMPTP--GNG TGMCVQVQQP LQGTFQVLRG BACU009575/1-257 MREEATTLSR RARPGGRTGD ATPAP--GNC TGMCVQVQPP LQGTFQVLRG ENSTTRP00000000295/1-250 MREEATTLSR RARPGGRMGD ATPAP--GNC TGMCVQVQPP LQGTFQVLRG 51 100 ENSP00000364621/1-255 NGASVGTVLM FRCPSNHQMV GSGLLTCTWK GSIAEWSSGS PVCKLVPPHE bmy_04154T0/1-314 DGTSVGTVIV FHCPSGHQMV GSGLLTCVWK GNIAEWSSET PMCKTVPPYE ENSBTAP00000000206/1-256 DGTSVGTVIM FHCPSGHQMV GSGLLTCAWK GNIAEWSSGT PMCKTVPPYE BACU009575/1-257 DGTSVGTVIV FHCPSGHQMV GSGLLTCVWK GNIAEWSSET PMCKTVPPYE ENSTTRP00000000295/1-250 NGTSVGTVIV FHCPSGHQMV GSGLLTCVWK GSIAEWSSET PMCKTVPPYE 101 150 ENSP00000364621/1-255 TFGFKVAVIA SIVSCAIILL MSMAFLTCCL LKCVKKSKRR RSNRSAQL-- bmy_04154T0/1-314 TFGFKVAVIS SIVSCAIIML MSMAFLTCCL MKCVKRSEQQ RSNRYSDLAL ENSBTAP00000000206/1-256 TFGFKVAVIS SIISCAIIML MSMAFLTCCF VKCLKRSEQR RSDRANQL-- BACU009575/1-257 TFGFKVAVIS SIVSCAIIML MSMAFLTCCL MKCVKRSEQR RSNRAAQL-- ENSTTRP00000000295/1-250 TFGFKVAVIS SIVSCAVIML MSMAFLTCCL MKCVKRSEQR RSNRAAQL-- 151 200 ENSP00000364621/1-255 ---------- ---------- ---------- ---WSQLKDE DLETVQAAYL bmy_04154T0/1-314 PRGTCKSLRD SWVCQGAGLL GSWHLAVHRA LRPWRARGSL AWSSIRQVTA ENSBTAP00000000206/1-256 ---------- ---------- ---------- ---WLQLRSE DLETVQAPYL BACU009575/1-257 ---------- ---------- ---------- ---WFQLRGE DLETEQAASL ENSTTRP00000000295/1-250 ---------- ---------- ---------- ---WFQLRDE DLETVQAACL 201 250 ENSP00000364621/1-255 GLKHFN---- ---KPVSGPS QAHDNHSFT- ---------- ---------- bmy_04154T0/1-314 ERRGLRDSTG R--LPRAQGP QQQTQHQWRG QDPAHPGSRQ PQLHHVGMGR ENSBTAP00000000206/1-256 GLKGLNSDSS ISGVSRIQPV QVHDNHSFT- ---------- ---------- BACU009575/1-257 GLKGLNNKRN ISGEARIQPI QAHDNHSFT- ---------- ---------- ENSTTRP00000000295/1-250 GLKGLN---- ---KSRIQPI QAHDNHSFT- ---------- ---------- 251 300 ENSP00000364621/1-255 ---TDHGEST SKLASVTRSV DKDPGIPRAL SLSGSSSSPQ AQVMVHMANP bmy_04154T0/1-314 ATGRDLGEGT RELASMARGI DKDPWTP--- --SGPTSSSR AQVMVHTANP ENSBTAP00000000206/1-256 ---TDLGEGT RELASMARGM DKDFWTA--- --SGPTSSPC SQVMVHTANP BACU009575/1-257 ---TDLGEGT RELASMARGI DKDPWTP--- --SGPTSSSR GQVMVHTANP ENSTTRP00000000295/1-250 ---TDLGEGT RELASMARGI DKDPWTP--- --SGPTSSPR AQVMVHTANP 301 350 ENSP00000364621/1-255 RQPLPASGLA TGMPQQPAAY ALG bmy_04154T0/1-314 GQMLPASRPT VGMLRQPAAY VPG ENSBTAP00000000206/1-256 GQILPPSRPT V-MLRQPAAY VPG BACU009575/1-257 GQMLPASRPT AGMLRQPAAY VPG ENSTTRP00000000295/1-250 GQMLPASRPT VGMLRQPAAY VPG