KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:44 2014 Check: 00 .. Name: ENSBTAP00000000209/1-640 Len: 696 Check: 207 Weight: 1.00 Name: ENSTTRP00000008855/1-638 Len: 696 Check: 7421 Weight: 1.00 Name: ENSP00000360967/1-642 Len: 696 Check: 2346 Weight: 1.00 Name: bmy_16527T0/1-654 Len: 696 Check: 5169 Weight: 1.00 Name: BACU003823/1-639 Len: 696 Check: 6218 Weight: 1.00 // 1 50 ENSBTAP00000000209/1-640 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000008855/1-638 ---------- ---------- ---------- ---------- ---------M ENSP00000360967/1-642 ---------- ---------- ---------- ---------- ---------M bmy_16527T0/1-654 MIRSILYNSH LAKLIGHFKG QEKVASDSIS LELPVDVVPD STKVYTTVLG BACU003823/1-639 ---------- ---------- ---------- ---------- ---------M 51 100 ENSBTAP00000000209/1-640 DKLKCLSFFK CRRK----EN AEVAPENLHV NENDENQERG NWSKKSDYLL ENSTTRP00000008855/1-638 DKLKCPSFFK CRGK----EK VTASSENFHV GGNDENQDRG NWSKKSDYIL ENSP00000360967/1-642 DKLKCPSFFK CREK----EK VSASSENFHV GENDENQDRG NWSKKSDYLL bmy_16527T0/1-654 ELKRAPSSYK PRKESSTLEK VTASSENFHI GENDENPDRG NWSKKSDYLL BACU003823/1-639 DKLKCPSFFK CRGK----EK VTASSENFHI GENDENPDRG NWSKKSDYLL 101 150 ENSBTAP00000000209/1-640 SMVGYAVGLG NVWRFPYLTY NNGGGAFLIP YVIMLALAGL PLFFLECSMG ENSTTRP00000008855/1-638 SMVGYAVGLG NVWRFPYLTY NNGGGAFLIP YAIMLALAGL PLFFLECSLG ENSP00000360967/1-642 SMIGYAVGLG NVWRFPYLTY SNGGGAFLIP YAIMLALAGL PLFFLECSLG bmy_16527T0/1-654 SMVGYAVGLG NVWRFPYLTY NNGGGAFLIP YAIMLALAGL PLFFLECSLG BACU003823/1-639 SMVGYAVGLG NVWRFPYLTY NNGGGAFLIP YAIMLALAGL PLFFLECSLG 151 200 ENSBTAP00000000209/1-640 QFSSLGPVSV WRILPLFQGV GITMVLISLF VTIYYNVIIA YSLYYLFASF ENSTTRP00000008855/1-638 QFASLGPVSV WRILPLFQGV GITMVLISIF VTIYYNVIIA YSLYYMFASF ENSP00000360967/1-642 QFASLGPVSV WRILPLFQGV GITMVLISIF VTIYYNVIIA YSLYYMFASF bmy_16527T0/1-654 QFASLGPVSV WRILPLFQGV GITMVLISIF VTIYYNVIIA YSLYYMFASF BACU003823/1-639 QFASLGPVSV WRILPLFQGV GITMVLISIF VTIYYNVIIA YSLYYMFASF 201 250 ENSBTAP00000000209/1-640 QRELPWSKCS ISWADGNCSR SPFVTHCNVS I---SINEIF QANKSWVDAN ENSTTRP00000008855/1-638 QRELPWKSCS -YWADKTCSR SPIVTHCNVS ----KLGEIF QVNKSWLDAN ENSP00000360967/1-642 QSELPWKNCS -SWSDKNCSR SPIVTHCNVS TVNKGIQEII QMNKSWVDIN bmy_16527T0/1-654 QRELPWKNCS -YWADKTCSR SPIVTHCNVS I---KLGEIF QVNKSWVDAN BACU003823/1-639 QRELPWQNCS -YWADKTCSR SPIVTHCNVS I---KLGEIF QVNKSWVDVN 251 300 ENSBTAP00000000209/1-640 NLTCINGSEV YQTGQLPSEQ YWNKVALQRS SGLDETGVIV WYLALCLLLA ENSTTRP00000008855/1-638 NFTCINGSEV YQPGQLPSEQ YWNKVALQRS SGLDEPGVIV WYLALCLLLA ENSP00000360967/1-642 NFTCINGSEI YQPGQLPSEQ YWNKVALQRS SGMNETGVIV WYLALCLLLA bmy_16527T0/1-654 NFTCINGSEV YQPGQLPSEQ YWNKVALQRS RGLDETGVIV WYLALCLLLA BACU003823/1-639 NFTCLNGSEV YQPGQLPSEQ YWNKVALQRS SGLDETGVIV WYLALCLLLA 301 350 ENSBTAP00000000209/1-640 WLIVGAALFK GIKSSGKVVY FTALFPYVVL LILVIRGATL EGASKGISYY ENSTTRP00000008855/1-638 WLIVGTALFK GIKSSGKVVY FTAIFPYVVL LILLIRGATL DGASKGISYY ENSP00000360967/1-642 WLIVGAALFK GIKSSGKVVY FTALFPYVVL LILLVRGATL EGASKGISYY bmy_16527T0/1-654 WLIVGTALFK GIKSSGKVVY FTAIFPYVVL LILLIRGATL DGASKGISYY BACU003823/1-639 WLIVGTALFK GIKSSGKVVY FTAIFPYVVL LILLIRGATL DGASKGISYY 351 400 ENSBTAP00000000209/1-640 IGAQSNFAKL KDAEVWKDAA TQIFYSLSVA WGGLVALSSY NKFNNNCYSD ENSTTRP00000008855/1-638 MGAQSNFTKL REAEVWKDAA TQIFYSLSVA WGGLVALSSY NKFNNNCFLD ENSP00000360967/1-642 IGAQSNFTKL KEAEVWKDAA TQIFYSLSVA WGGLVALSSY NKFKNNCFSD bmy_16527T0/1-654 IGAQSNFTKL REAENF---- ---------- ---------- ---------- BACU003823/1-639 IGAQSNFTKL REAEVWKDAA TQIFYSLSVA WGGLVALSSY NKFNNNCFSD 401 450 ENSBTAP00000000209/1-640 AIVVCVTNCL TSVFAGFAIF SILGHMAHIS GKEVTQVVKS GFDLAFIAYP ENSTTRP00000008855/1-638 AIVICLANCL TSVFAGFAIF SILGHMAHIS GKEVSQVVKS GFDLAFIAYP ENSP00000360967/1-642 AIVVCLTNCL TSVFAGFAIF SILGHMAHIS GKEVSQVVKS GFDLAFIAYP bmy_16527T0/1-654 ----TIKMDL PSVFAGFAIF SILGHMAHIS GKEVSQVVKS GFDLAFIAYP BACU003823/1-639 AIVICLTNCL TSVFAGFAIF SILGHMAHIS GKEVSQVVKS GFDLAFIAYP 451 500 ENSBTAP00000000209/1-640 EALAQLPGGP FWSVLFFFML LTLGLDSQFA SIETITTTIQ DLFPKVMKKM ENSTTRP00000008855/1-638 EALALLPGGP FWSVLFFFML LTLGLDSQFA SIETITTTIQ DLFPKAMKKM ENSP00000360967/1-642 EALAQLPGGP FWSILFFFML LTLGLDSQFA SIETITTTIQ DLFPKVMKKM bmy_16527T0/1-654 EALAQLPGGP FWSILFFFML LTLGLDSQFA SVETITTTIQ DLLPKVMKKM BACU003823/1-639 EALAQLPGGP FWSILFFFML LTLGLDSQFA SVETITTTIQ DLFPKVMKKM 501 550 ENSBTAP00000000209/1-640 RAPITLGCCL VLFFLGLICV TQAGIYWVNL IDHFCAGWGI LIAAILEIIG ENSTTRP00000008855/1-638 RVLITSGCCL VLFLLGLVCV TQAGIYWVHL IDHFCAGWGI LIAAILELMG ENSP00000360967/1-642 RVPITLGCCL VLFLLGLVCV TQAGIYWVHL IDHFCAGWGI LIAAILELVG bmy_16527T0/1-654 RVPITLGCCL VLFLLGLVCV TQAGIYWVHL IDHFCAGWGI LIAAILELMG BACU003823/1-639 RAPITLCCCL VLFLLGLICV TQAGIYWVHL IDHFCAGWGI LIAAILELMG 551 600 ENSBTAP00000000209/1-640 VVWIYGGNRF IDDIEMMIGA KRWIFWLWWR TCWFVITPIL LMSILIWSVI ENSTTRP00000008855/1-638 IMWIYXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXAILIWSLV ENSP00000360967/1-642 IIWIYGGNRF IEDTEMMIGA KRWIFWLWWR ACWFVITPIL LIAIFIWSLV bmy_16527T0/1-654 IIWIYGGNRF IEDIEMMIGA KRWIFWLWWR ACWFVVTPVL LMAILIWSLV BACU003823/1-639 IIWIYGGNRF IEDIEMMIGA KRWIFWLWWR ACWFVITPVL LTAILIWSLV 601 650 ENSBTAP00000000209/1-640 QFRRPKYGQI PYPNWGVALG WCMITFCIIW IPVMAIINII QAKGNIFQRI ENSTTRP00000008855/1-638 QFHRPDYGKI PYPDWGVALG WCMITFCIIW IPIMAITKLI QAEGTILQRI ENSP00000360967/1-642 QFHRPNYGAI PYPDWGVALG WCMIVFCIIW IPIMAIIKII QAKGNIFQRL bmy_16527T0/1-654 KFHRPEYAQI PYPDWGVALG WCMIIFCIIW IPIMAIIKII QAEGTILQRI BACU003823/1-639 QFHRPEYAQI PYPDWGVAIG WCMIIFCIIW IPIMAIIKII QAEGTILQRI 651 700 ENSBTAP00000000209/1-640 ATCCRPAANW GPYLEKHRGE RYENMSDSKK ETNHEISNIS DSRKPE ENSTTRP00000008855/1-638 VSCCRPASNW GPYLERHRGE RYKNMVDPKK ETDHEIPTVS GSRKPE ENSP00000360967/1-642 ISCCRPASNW GPYLEQHRGE RYKDMVDPKK EADHEIPTVS GSRKPE bmy_16527T0/1-654 VSCCRPASNW GPYLERHRGE RYKNMVDPEK ETDHEIPTVS GSRKPE BACU003823/1-639 VSCCRPASNW GPYLERHRGE RYKNMVDREK ETDHEIPTVS GSRKPE