KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:45 2014 Check: 00 .. Name: ENSP00000307235/1-1116 Len: 1119 Check: 8687 Weight: 1.00 Name: ENSBTAP00000000210/1-1115 Len: 1119 Check: 9590 Weight: 1.00 Name: BACU005883/1-903 Len: 1119 Check: 3689 Weight: 1.00 Name: bmy_18941T0/1-925 Len: 1119 Check: 4988 Weight: 1.00 Name: ENSTTRP00000002201/1-858 Len: 1119 Check: 7316 Weight: 1.00 // 1 50 ENSP00000307235/1-1116 MERAISPGLL VRALLLLLLL LGLAARTVAA GRARGLPAPT AEAAFGLGAA ENSBTAP00000000210/1-1115 MERATGPGSL ARTLLLPLL- LGLVAGTVTA RRTSDLLAPT AEAAFGLGAA BACU005883/1-903 ---------- ---------- ---------- ---------- ---------- bmy_18941T0/1-925 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002201/1-858 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000307235/1-1116 AAPTSATRVP AAGAVAAAEV TVEDAEALPA AAGEQEPR-- GPEPDDETEL ENSBTAP00000000210/1-1115 AAPTSATRVP ATGAVIAAEV TVEDSEALPA AAGEQEAREP EPEPEEEPDI BACU005883/1-903 ---------- ---------- ---------- ---------- ---------- bmy_18941T0/1-925 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002201/1-858 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000307235/1-1116 RPRGRSLVII STLDGRIAAL DPENHGKKQW DLDVGSGSLV SSSLSKPEVF ENSBTAP00000000210/1-1115 RPCGRSLVII STLDGRIAAL DPENHGKKQW DLDVGSGSLV SSSLSKPEVF BACU005883/1-903 MMKKRSLVII STLDGRIAAL DPENHGKKQW DLDVGSGSLV SSSLSKPEVF bmy_18941T0/1-925 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002201/1-858 -----SLVII STLDGRIAAL DPENHGQKQW DLDVGSGSLV SSSLSKPEVF 151 200 ENSP00000307235/1-1116 GNKMIIPSLD GALFQWDQDR ESMETVPFTV ESLLESSYKF GDDVVLVGGK ENSBTAP00000000210/1-1115 GNKMIIPSLD GDLFQWDRDR ESMETVPFTV ESLLESSYKF GDDVVLVGGK BACU005883/1-903 GNKMIIPSLD GDLFQWDRDR ESMETVPFTV ESLLESSYKF GDDVVLVGGK bmy_18941T0/1-925 ---MIIPSLD GDLFQWDRDR ESMETVPFTV ESLLESSYKF GDDVVLVGGK ENSTTRP00000002201/1-858 GNKMIIPSLD GDLFQWDRDR ESMETVPFTV ESLLESSYKF GDDVVLVGGK 201 250 ENSP00000307235/1-1116 SLTTYGLSAY SGKVRYICSA LGCRQWDSDE MEQEEDILLL QRTQKTVRAV ENSBTAP00000000210/1-1115 SLTTYGLSAY SGKVRYICSA LGCRQWDNDE MEQEEDILLL QRTQKTVRAV BACU005883/1-903 SLTTYGLSAY SGKVRYICSA LGCRQWDNDE MEQEEDILLL QRTQKTVRAV bmy_18941T0/1-925 SLTTYGLSAY SGKVRYICSA LGCRQWDNDE MEQEEDILLL QRTQKTVRAV ENSTTRP00000002201/1-858 SLTTYGLSAY SGKVRYICSA LGCRQWDNDE MEQEEDILLL QRTQKTVRAV 251 300 ENSP00000307235/1-1116 GPRSGNEKWN FSVGHFELRY IPDMETRAGF IESTFKPNEN TEESKIISDV ENSBTAP00000000210/1-1115 GPRSGNEKWN FSVGHFELRY IPDMETRAGF IESTLKPSGN KEQSKIISDV BACU005883/1-903 GPRSGSEKWN FSVGHFELRY IPDMETRAGF IESTLKPSGN KEQSKIISDV bmy_18941T0/1-925 GPRSGSEKWN FSVGHFELRY IPDMETRAGF IESTLKPSGS KEQSKIISDV ENSTTRP00000002201/1-858 GPRSGSEKWN FSVGHFELRY IPDMETRAGF IESTLKPSGN KEQSKIISDV 301 350 ENSP00000307235/1-1116 EEQEAAIMDI VIKVSVADWK VMAFSKKGGH LEWEYQFCTP IASAWLLKDG ENSBTAP00000000210/1-1115 EEQEAVMMDT VIKVSVADWK VMAFNKKGGH LEWEYQFCTP IASAWLVKDG BACU005883/1-903 EEQEAAVMDT VIKVSVADWK VMAFSKKGGH LEWEYQFCTP IASAWLVKDG bmy_18941T0/1-925 EEQEAAIMDT VIKVSVADWK VMAFSKKGGH LEWEYQFCTP IASAWLVKDG ENSTTRP00000002201/1-858 EEQEAAVMDT VIKVSVADWK VMAFSKKGGH LEWEYQFCTP IASAWLLKDG 351 400 ENSP00000307235/1-1116 KVIPISLFDD TSYTSNDDVL EDEEDIVEAA RGATENSVYL GMYRGQLYLQ ENSBTAP00000000210/1-1115 KVIPISLFDD TSYAPNDGVL EDEEDIVEAA RGATENSVYL GMYRGQLYLQ BACU005883/1-903 KVIPISLFDD TSYATNDGVL EDEEDIVEAA RGATENSVYL GMYRGQLYLQ bmy_18941T0/1-925 KVIPISLFDD TSYATNDGVL EDEEDIVEAA RGATENSVYL GMYRGQLYLQ ENSTTRP00000002201/1-858 KVIPISLFDD TSYTTNDGVL EDEEDIVEAA RGATENSVYL GMYRGQLYLQ 401 450 ENSP00000307235/1-1116 SSVRISEKFP SSPKALESVT NENAIIPLPT IKWKPLIHSP SRTPVLVGSD ENSBTAP00000000210/1-1115 SSVRISEKFP TSPKALESVS SENAIIPLPT IKWKPLIHSP SRTPVLVGSD BACU005883/1-903 SSVRISEKFP TSPKALESVN SENAIIPLPT IKWKPLIHSP SRTPVLVGSD bmy_18941T0/1-925 SSVRISEKFP TSPKALESVN SENAIIPLPT IKWKPLIH-- ---------- ENSTTRP00000002201/1-858 SSVRISEKFP TSPKALESVN SENAIIPL-T IKWKPLIHSP SRTPVLVGSD 451 500 ENSP00000307235/1-1116 EFDKCLSNDK FSHEEYSNGA LSILQYPYDN GYYLPYYKRE RNKRSTQITV ENSBTAP00000000210/1-1115 EFDKCLSNDK FSHEEYSNGA LSILQYPYDN GYYLPYYKRE RNKRSTQITV BACU005883/1-903 EFDKCLSNDK FSHEEYSNGA LSILQYPY-- ---------- ---------- bmy_18941T0/1-925 ---------- ---------- ---------N GYYLPYYKRE RNKRSTQITV ENSTTRP00000002201/1-858 EFDKCLSNDK FSHEEYSNGA LSILQYPYDN GYYLPYYKRE RNKRSTQITV 501 550 ENSP00000307235/1-1116 RFLDNPHYNK NIRKKDPVLL LHWWKEIVAT ILFCIIATTF IVRRLFHPHP ENSBTAP00000000210/1-1115 RFLDNPNY-K NIRKKDPVLL LHWWKEIVGT IVFCIVATTF IVRRLFHPHP BACU005883/1-903 ---------- ---------- ---------- ---------- ---------- bmy_18941T0/1-925 RFLDNPNYNK NIRKKDPVLL LHWWKEIVGT ILFCIVATTF IVRRLFHPHP ENSTTRP00000002201/1-858 RFLDNPNYSK SVRKKDPVLL LHWWKEIVGT ILFCIVATTF IVRRLFHPHP 551 600 ENSP00000307235/1-1116 HRQRKESETQ CQTENKYDSV SGEANDSSWN DIKNSGYISR YLTDFEPIQC ENSBTAP00000000210/1-1115 HRQRKESETQ CQTENKYDAV SGEANDSSWN DIKNSGYVSR YLTDFEPIQC BACU005883/1-903 ---------- ---------- ---------- ---------- ---DFEPIQC bmy_18941T0/1-925 HRQRKESETQ CQTENKYDSV SGEANDSSWN DIKNSGYVSR YLTDFEPIQC ENSTTRP00000002201/1-858 HRQRKESETQ CQTENKYDSV SGEANDSSWN DIKNSGYVSR YLTDFEPIQC 601 650 ENSP00000307235/1-1116 LGRGGFGVVF EAKNKVDDCN YAIKRIRLPN RELAREKVMR EVKALAKLEH ENSBTAP00000000210/1-1115 MGRGGFGVVF EARNKVDDCN YAIKRIRLPN RELAREKVMR EVKALAKLEH BACU005883/1-903 MGRGGFGVVF EARNKVDDCN YAIKRIRLPN RELAREKVMR EVKALAKLEH bmy_18941T0/1-925 MGRGGFGVVF EARNKVDDCN YAIKRIRLPN RELAREKVMR EVKALAKLEH ENSTTRP00000002201/1-858 MGRGGFGVVF EARNKVDDCN YAIKRIRLPN RELAREKVMR EVKALAKLEH 651 700 ENSP00000307235/1-1116 PGIVRYFNAW LEAPPEKWQE KMDEIWLKDE STDWPLSSPS PMDAPSVKIR ENSBTAP00000000210/1-1115 PGIVRYFNAW LEAPPEKWQE KMDEIWLKDD STDWPLSSPS PVDAPSVKIR BACU005883/1-903 PGIVRYFNAW LEAPPEKWQE KMDEIWLKDE STDWPLSSPS PADAPSVKIC bmy_18941T0/1-925 PGIVRYFNAW LEAPPEKWQE KMDEIWLKDE STDWPLSSPS PADAPSVKIC ENSTTRP00000002201/1-858 PGIVRYFNAW LEAPPEKWQE KMDEIWLKDE STDWPLTSPS PVDAPSVKIC 701 750 ENSP00000307235/1-1116 RMDPFATKEH IEIIAPSPQR SRSFSVGISC DQTSSSESQF SPLEFSGMDH ENSBTAP00000000210/1-1115 RMDPFSTKEC IEIIAPSPHS SRSFSVGISC SQTSSSESQF SPLEFSGMDH BACU005883/1-903 RMDPFSTKER IEIIAPSPRS SRSFSVGISC VQTGSSKSQF SPLEFSGMDH bmy_18941T0/1-925 RMDPFSTKER IEIIAPSPRS SRSFSVGISC GQTGSSKSQF SPLEFSRMDH ENSTTRP00000002201/1-858 RMDPFSTKER VEIIAPSPRS SSSFSVGISC GQTGSSKSQF SPLEFSGMDH 751 800 ENSP00000307235/1-1116 EDISESVDAA YNLQDSCLTD CDVEDGTMDG NDEGHSFELC PSEASPYVRS ENSBTAP00000000210/1-1115 GNVSKSADAV CQLQDSCLTD CEGEDGTMDG NDEGHSFELC PSEASPYIRS BACU005883/1-903 RDTSESVDAV CNLQDSCLTD CEGEDGTRDG NDEGHSFELC PSEASPYVRS bmy_18941T0/1-925 RDTSESVDAV CNLQDSCLTD CEGEDSTRDG NDEGHSFELC PSEASPYVRS ENSTTRP00000002201/1-858 RDTSESVDAV CNLQDSCLTD CKGEDGTRDG NDEGHSY--- ---------- 801 850 ENSP00000307235/1-1116 RERTSSSIVF EDSGCDNASS KEEPKTNRLH IGNHCANKLT AFKPTSSKSS ENSBTAP00000000210/1-1115 RERTSSSIVF EDSGCDNASS KEEPRMNQPP VGNHYANKLS ALRHSGSKS- BACU005883/1-903 RERTSSSIVF EDSGCDNASS KEEPKTNRPP IGNHCADKLT AVQHSSSKSF bmy_18941T0/1-925 RERTSSSIVF EDSGCDNASS KEEPKTNRPP VGNHCANKLT AVQHSSSKSS ENSTTRP00000002201/1-858 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000307235/1-1116 SEATLSISPP RPTTLSLDLT KNTTEKLQPS SPKVYLYIQM QLCRKENLKD ENSBTAP00000000210/1-1115 SEPTVSVSPS RPTTLSLDLT KSSVGKLQPS SPKVYLYIQM QLCRKENLKD BACU005883/1-903 SEPTLSVSPS RPTTLSLALA KNSVEKLQPS SPKVYLYIQM QLCRKENLKD bmy_18941T0/1-925 SEPTLSISPS RPTTLSLALT KNSVEKLQPS SPKVYLYIQM QLCRKENLKD ENSTTRP00000002201/1-858 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000307235/1-1116 WMNGRCTIEE RERSVCLHIF LQIAEAVEFL HSKGLMHRDL KPSNIFFTMD ENSBTAP00000000210/1-1115 WLNSRCTIEA RERSVCLHIF LQIAEAVEFL HSKGLMHRDL KPSNIFFTMD BACU005883/1-903 WLNSRCTIEE RERNVCLHIF LQIVEAVEFL HGKGLMHRDL KPSNIFFTMD bmy_18941T0/1-925 WLNSRCTIEE RERNVCLHIF LQIAEAVEFL HGKGLMHRDL KPSNIFFTMD ENSTTRP00000002201/1-858 ---------- ---------- ---------- ---------- VPSNIFFTMD 951 1000 ENSP00000307235/1-1116 DVVKVGDFGL VTAMDQDEEE QTVLTPMPAY ARHTGQVGTK LYMSPEQIHG ENSBTAP00000000210/1-1115 DVVKVGDFGL VTAMDQDEED QMVLTPMPGY ARHTGQVGTK LYMSPEQIHG BACU005883/1-903 DVVKVGDFGL VTAMDQDEED QLVLTPMPGY ARHTGQVGTK LYMSPEQIHG bmy_18941T0/1-925 DVVKVGDFGL VTAMDQDEED QLVLTPMPGY ARHTGQVGTK LYMSPEQIHG ENSTTRP00000002201/1-858 DVVKVGDFGL VTAMDQDEED QLVLTPMPGY ARHTGQVGTK LYMSPE-IHG 1001 1050 ENSP00000307235/1-1116 NSYSHKVDIF SLGLILFELL YPFSTQMERV RTLTD-VRNL KFPPLFTQKY ENSBTAP00000000210/1-1115 NSYSHKVDIF SLGLILFELL YPFGTQMERV RILTD-VRDL KFPPLFAQKY BACU005883/1-903 NNYSHKVDIF SLGLILFELL YPFGTHMERV RILTD-VRDL KFPPLFTQKY bmy_18941T0/1-925 NNYSHKVDIF SLGLILFELL YPFGTHMERV RILTDSLIST DFVCWSYAPQ ENSTTRP00000002201/1-858 NNYSHKVDIF SLGLILFELL YPFGTHMERV RXXXX-XXXX XXXXXXXXXX 1051 1100 ENSP00000307235/1-1116 PCEYVMVQDM LSPSPMERPE AINIIENAVF EDLDFPGKTV LRQRSRSLSS ENSBTAP00000000210/1-1115 PREYAMVQDM LSPSPTERPE AASIIENAIF EDLEFPEKTL LRQRSRSMSS BACU005883/1-903 PREYVMVQDM LSPSPTERPE AANIIENAIF EDLEFPGKTV LRQRSRSMSS bmy_18941T0/1-925 SDTCVMVQDM LSPSPTERPE AANIIENAIF EDLEFPGKTV LRQRSRSMSS ENSTTRP00000002201/1-858 XXXYVMVQDM LSPSPTERPE AANIIENAIF EDLEFPGKTV LRQRSRSMSS 1101 1150 ENSP00000307235/1-1116 SGTKHSRQSN NSHSPLPSN ENSBTAP00000000210/1-1115 PGAKHSRHSS SPHSPLPSN BACU005883/1-903 SGTKQSRHSS SSHSPLPSN bmy_18941T0/1-925 SGTKQSRHSS SSHSPLPSN ENSTTRP00000002201/1-858 SGTKQSRHSS SSHSPLPSN