KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:10:53 2014 Check: 00 ..
Name: bmy_09713T0/1-120 Len: 240 Check: 2768 Weight: 1.00
Name: BACU009425/1-229 Len: 240 Check: 4260 Weight: 1.00
Name: ENSTTRP00000009142/1-224 Len: 240 Check: 7380 Weight: 1.00
Name: ENSP00000220812/1-224 Len: 240 Check: 1302 Weight: 1.00
Name: ENSBTAP00000000277/1-222 Len: 240 Check: 4014 Weight: 1.00
//
1 50
bmy_09713T0/1-120 MVVVVLLWLG WLCAPLGALV LDVNNIKSSA DAQGAWKD-- --SQCVSDKD
BACU009425/1-229 MVVVVLLWLG WLCAPLGALV LDVNNIKSSA DAQGARKAPE WFSAAASSRS
ENSTTRP00000009142/1-224 MVVLVLLRLG WLCAPLGALV LDVNN-KSSV DAQGARKX-- --XXXXXXXX
ENSP00000220812/1-224 MVAAVLLGLS WLCSPLGALV LDFNNIRSSA DLHGARKG-- --SQCLSDTD
ENSBTAP00000000277/1-222 MVVVVLLGLG WLCAPLGALV LDSNYIKSSS GAQRARKG-- --SQCVSDKD
51 100
bmy_09713T0/1-120 CNTRKFCLKP QDEKPSCATC RGLRRWC--- ---QRAAVCC PGTLCVN---
BACU009425/1-229 SKIVSFPAAT LASNLEMFLK QGFKLESFKF FCFHLDSINY LSTCFAIYVC
ENSTTRP00000009142/1-224 XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ---XXXXXXX XXXXXXXXXX
ENSP00000220812/1-224 CNTRKFCLQP RDEKPFCATC RGLRRRC--- ---QRDAMCC PGTLCVNDVC
ENSBTAP00000000277/1-222 CSARKFCLQR YDEKPFCATC RGPRRRC--- ---QLSTMCC PGTLCMNNFC
101 150
bmy_09713T0/1-120 ---------- ---------- ---GESAQRL AG-------- ----------
BACU009425/1-229 TAMEDATPVL ERQIDDQDDT DTQGTTEHPI QENKPKRKPN IKKSQGSKGE
ENSTTRP00000009142/1-224 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXKSQGSKGQ
ENSP00000220812/1-224 TTMEDATPIL ERQLDEQDGT HAEGTTGHPV QENQPKRKPS IKKSQGRKGQ
ENSBTAP00000000277/1-222 TPVEEAAKGP EKGTDDKDNI DTEETTEHPT QGNSNTTKPQ PRKSKSSILR
151 200
bmy_09713T0/1-120 ---------- ---------- ---------- ---------- ----------
BACU009425/1-229 SSIDKREKAV LELSTVDLDF AVLVIFGLKF VN----RSHW RDRSALGEGT
ENSTTRP00000009142/1-224 -----EGESC LRTFDCEPGL CCARHFWTKI CKPVPLEGQV CSRRAHKDTA
ENSP00000220812/1-224 -----EGESC LRTFDCGPGL CCARHFWTKI CKPVLLEGQV CSRRGHKDTA
ENSBTAP00000000277/1-222 ----HRGERC LRDFNCGPGL CCAHHYRTKI CKPVLLEGHV CSRRGHNNNT
201 250
bmy_09713T0/1-120 -----LQRSQ -------RAD TASGSLRLGY STTGTL----
BACU009425/1-229 KIPSKLQKSS SA--VTVVLD YHVEVRRLEI NNTHG-----
ENSTTRP00000009142/1-224 QAPEIFQRCD CGPGLSCRSQ ATGNQRNSGL RVCQKIEQLH
ENSP00000220812/1-224 QAPEIFQRCD CGPGLLCRSQ LTSNRQHARL RVCQKIEKL-
ENSBTAP00000000277/1-222 HVVDIFQRCH CAPGLVCQSQ AAQDPVHTQL HVCQKA----