KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:53 2014 Check: 00 .. Name: bmy_09713T0/1-120 Len: 240 Check: 2768 Weight: 1.00 Name: BACU009425/1-229 Len: 240 Check: 4260 Weight: 1.00 Name: ENSTTRP00000009142/1-224 Len: 240 Check: 7380 Weight: 1.00 Name: ENSP00000220812/1-224 Len: 240 Check: 1302 Weight: 1.00 Name: ENSBTAP00000000277/1-222 Len: 240 Check: 4014 Weight: 1.00 // 1 50 bmy_09713T0/1-120 MVVVVLLWLG WLCAPLGALV LDVNNIKSSA DAQGAWKD-- --SQCVSDKD BACU009425/1-229 MVVVVLLWLG WLCAPLGALV LDVNNIKSSA DAQGARKAPE WFSAAASSRS ENSTTRP00000009142/1-224 MVVLVLLRLG WLCAPLGALV LDVNN-KSSV DAQGARKX-- --XXXXXXXX ENSP00000220812/1-224 MVAAVLLGLS WLCSPLGALV LDFNNIRSSA DLHGARKG-- --SQCLSDTD ENSBTAP00000000277/1-222 MVVVVLLGLG WLCAPLGALV LDSNYIKSSS GAQRARKG-- --SQCVSDKD 51 100 bmy_09713T0/1-120 CNTRKFCLKP QDEKPSCATC RGLRRWC--- ---QRAAVCC PGTLCVN--- BACU009425/1-229 SKIVSFPAAT LASNLEMFLK QGFKLESFKF FCFHLDSINY LSTCFAIYVC ENSTTRP00000009142/1-224 XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ---XXXXXXX XXXXXXXXXX ENSP00000220812/1-224 CNTRKFCLQP RDEKPFCATC RGLRRRC--- ---QRDAMCC PGTLCVNDVC ENSBTAP00000000277/1-222 CSARKFCLQR YDEKPFCATC RGPRRRC--- ---QLSTMCC PGTLCMNNFC 101 150 bmy_09713T0/1-120 ---------- ---------- ---GESAQRL AG-------- ---------- BACU009425/1-229 TAMEDATPVL ERQIDDQDDT DTQGTTEHPI QENKPKRKPN IKKSQGSKGE ENSTTRP00000009142/1-224 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXKSQGSKGQ ENSP00000220812/1-224 TTMEDATPIL ERQLDEQDGT HAEGTTGHPV QENQPKRKPS IKKSQGRKGQ ENSBTAP00000000277/1-222 TPVEEAAKGP EKGTDDKDNI DTEETTEHPT QGNSNTTKPQ PRKSKSSILR 151 200 bmy_09713T0/1-120 ---------- ---------- ---------- ---------- ---------- BACU009425/1-229 SSIDKREKAV LELSTVDLDF AVLVIFGLKF VN----RSHW RDRSALGEGT ENSTTRP00000009142/1-224 -----EGESC LRTFDCEPGL CCARHFWTKI CKPVPLEGQV CSRRAHKDTA ENSP00000220812/1-224 -----EGESC LRTFDCGPGL CCARHFWTKI CKPVLLEGQV CSRRGHKDTA ENSBTAP00000000277/1-222 ----HRGERC LRDFNCGPGL CCAHHYRTKI CKPVLLEGHV CSRRGHNNNT 201 250 bmy_09713T0/1-120 -----LQRSQ -------RAD TASGSLRLGY STTGTL---- BACU009425/1-229 KIPSKLQKSS SA--VTVVLD YHVEVRRLEI NNTHG----- ENSTTRP00000009142/1-224 QAPEIFQRCD CGPGLSCRSQ ATGNQRNSGL RVCQKIEQLH ENSP00000220812/1-224 QAPEIFQRCD CGPGLLCRSQ LTSNRQHARL RVCQKIEKL- ENSBTAP00000000277/1-222 HVVDIFQRCH CAPGLVCQSQ AAQDPVHTQL HVCQKA----