KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:58 2014 Check: 00 .. Name: ENSP00000332208/1-928 Len: 1045 Check: 4868 Weight: 1.00 Name: ENSBTAP00000000329/1-927 Len: 1045 Check: 4807 Weight: 1.00 Name: ENSTTRP00000010479/1-932 Len: 1045 Check: 3098 Weight: 1.00 Name: bmy_06837T0/1-992 Len: 1045 Check: 8666 Weight: 1.00 Name: BACU014248/1-928 Len: 1045 Check: 4346 Weight: 1.00 // 1 50 ENSP00000332208/1-928 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000329/1-927 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010479/1-932 ---------- ---------- ---------- ---------- ---------- bmy_06837T0/1-992 MREKEERGER RCGEWDSIAQ ARRAQTGGER QSRLGPPSSQ GGPSCTCARP BACU014248/1-928 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000332208/1-928 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000329/1-927 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010479/1-932 ---------- ---------- ---------- ---------- ---------- bmy_06837T0/1-992 SFSATPGGSR AAASVPAPAA PGPQPRPAPP RPGFGAPLGA GRAAGARVSV BACU014248/1-928 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000332208/1-928 ---MAKVPEL EDTFLQAQPA PQLSPGIQED CCVQLLGKGL LVYPEETVYL ENSBTAP00000000329/1-927 ---MAKLPEL EDAFLQAQAS PPVSPEVQE- CCVQLLGKGL LVYPEERVYL ENSTTRP00000010479/1-932 ---MAKVPEL EDAFLQVQAS PQVSPEVQEE CCVQLLSKGL LVFPEERVYL bmy_06837T0/1-992 ARRMAKVPEL EDAFLQVQAS PQVSPEVQEE CCVQLLSKGL LVFPEERVYL BACU014248/1-928 ---MAKVPEL EDAFLQVQAS PQVSPEVQEE CCVQLLSKGL LVFPEERVYL 151 200 ENSP00000332208/1-928 AAEGQPGGEQ GGGEKGEDPE LPGAVKSEMH LNNGNFSSEE EDADNHDSKT ENSBTAP00000000329/1-927 AAEAQPGRAL GSGEKADDPE LPGGVKSEMH LSNGNFSSEE EDADNPDSKT ENSTTRP00000010479/1-932 AAEAQPGGAL GSGEKGDDPE LPVGVKAEMH LSNGNFSSEE EVADNQDSKT bmy_06837T0/1-992 AAEAQPGGAL GSGEKGDDPE LPVGVKAEMH LSNGNFSSEE EVADNQDSKT BACU014248/1-928 AAEAQPGVAL GSGEKGVDPE LPVGVKAEMH LSNGNFSSEE EVADNQDSKT 201 250 ENSP00000332208/1-928 KAADQYLSQK KTITQIVKDK KKQTQLTLQW LEENYIVCEG VCLPRCILYA ENSBTAP00000000329/1-927 KATDPHLSQK KTITQIMKDK KKQTQLTLQW LEENYIVCEG VCLPRCILYA ENSTTRP00000010479/1-932 KATDPHLSQK KTITQIMKDK KKQTQLTLQW LEENYIVCEG VCLPRCILYA bmy_06837T0/1-992 KATDPHLSQK KTITQIMKDK KKQTQLTLQW LEENYIVCEG VCLPRCILYA BACU014248/1-928 KATDPHLSQK KTITQIMKDK KKQTQLTLQW LEENYIVCEG VCLPRCILYA 251 300 ENSP00000332208/1-928 HYLDFCRKEK LEPACAATFG KTIRQKFPLL TTRRLGTRGH SKYHYYGIGI ENSBTAP00000000329/1-927 HYLDFCRKEK LEPACAATFG KTIRQKFPLL TTRRLGTRGH SKYHYYGIGI ENSTTRP00000010479/1-932 HYLDFCRKEK LEPACAATFG KTIRQKFPLL TTRRLGTRGH SKYHYYGIGI bmy_06837T0/1-992 HYLDFCRKEK LEPACAATFG KTIRQKFPLL TTRRLGTRGH SK-------- BACU014248/1-928 HYLDFCRKEK LEPACAATFG KTIRQKFPLL TTRRLGTRGH SKYHYYGIGI 301 350 ENSP00000332208/1-928 KESSAYYHSV YSGKGLTRFS GSKLKNE--- -------GGF TRKYSLSSKT ENSBTAP00000000329/1-927 KESSAYYHSV YSGKGLTRFS GSKLKNE--- -------GGF TRKYSLSSKT ENSTTRP00000010479/1-932 KESSAYYHSV YSGKGLTRFS GSKLKNE--- -------GGF TRKYSLSSKT bmy_06837T0/1-992 ---------- --------FS GSKLKNESDQ PSQFAQGGGF TRKYSLSSKT BACU014248/1-928 KESSAYYHSV YSGKGLTRFS GSKLKNE--- -------GGF TRKYSLSSKT 351 400 ENSP00000332208/1-928 GTLLPEFPSA QHLVYQGCIS KDKVDTLIMM YKTHCQCILD NAINGNFEEI ENSBTAP00000000329/1-927 GTLLPEFPSA QHLVYQGCLS KDKVDTLIMM YKTHCQCILD NAINGNFEEI ENSTTRP00000010479/1-932 GTLLPEFPSA QHLVYQGCIS KDKVDTLIMM YKTHCQCILD NAINGNFEEI bmy_06837T0/1-992 GTLLPEFPSA QHLVYQGCIS KDKVDTLIMM YKTHCQCILD NAINGNFEEI BACU014248/1-928 GTLLPEFPSA QHLVYQGCIS KDKVDTLIMM YKTHCQCILD NAINGNFEEI 401 450 ENSP00000332208/1-928 QHFLLHFWQG MPDHLLPLLE NPVIIDIFCV CDSILYKVLT DVLIPATMQE ENSBTAP00000000329/1-927 QHFLLHFWQG MPDHLLPLLE NPVIIDIFCV CDSILYKVLT DVLIPATMQE ENSTTRP00000010479/1-932 QHFLLHFWQG MPDHLLPLLE NPVIIDIFCV CDSILYKVLT DVLIPATMQE bmy_06837T0/1-992 QHFLLHFWQG MPDHLLPLLE NPVIIDIFCV CDSILYKVLT DVLIPATMQE BACU014248/1-928 QHFLLHFWQG MPDHLLPLLE NPVIIDIFCV CDSILYKVLT DVLIPATMQE 451 500 ENSP00000332208/1-928 MPE----SLL ADIRNFAKNW EQWVVSSLEN LPEALTDKKI PIVRRFVSSL ENSBTAP00000000329/1-927 MPE----SLL ADIRNFAKNW EQWVVSSLEN LPEALTDKKI PIVRRFVSSL ENSTTRP00000010479/1-932 MPESFFCSLL ADIRNFAKNW EQWVVSSLEN LPEALTDKKI PIVRRFVSSL bmy_06837T0/1-992 MPE----SLL ADIRNFAKNW EQWVVSSLEN LPEALTDKKI PIVRRFVSSL BACU014248/1-928 MPE----SLL ADIRNFAKNW EQWVVSSLEN LPEALTDKKI PIVRRFVSSL 501 550 ENSP00000332208/1-928 KRQTSFLHLA QIARPALFDQ HVVNSMVSDI ERVDLNSIGS QALLTISGST ENSBTAP00000000329/1-927 KRQTSFLHLA QIARPALFDQ HVVNSMVSDI EKVDLNSIGS QALLTISGST ENSTTRP00000010479/1-932 KRQTSFLHLA QIARPALFDQ HVVNSMVSDI EKVDLNSIGS QALLTISGST bmy_06837T0/1-992 KRQTSFLHLA QIARPALFDQ HVVNSMVSDI EKVDLNN--- ---------- BACU014248/1-928 KRQTSFLHLA QIARPALFDQ HVVNSMVSDI EKVDLNSIGS QALLTISGST 551 600 ENSP00000332208/1-928 DTESGIYTEH DSITVFQELK DLLKKNATVE AFIEWLDTVV EQRVIKTSKQ ENSBTAP00000000329/1-927 DTESDIYTEY DSITVFQELK DLLKKNATVE AFIEWLDTVV EQRVIKTSKQ ENSTTRP00000010479/1-932 DTESDIYTEY DSITVFQELK DLLKKNATVE AFIEWLDTVV EQRVIKTSKQ bmy_06837T0/1-992 ---------- DSITVFQELK DLLKKNATVE AFIEWLDTVV EQRVIKTSKQ BACU014248/1-928 DTESDIYTEY DSITVFQELK DLLKKNATVE AFIEWLDTVV EQRVIKTSKQ 601 650 ENSP00000332208/1-928 NGRSLKKRAQ DFLLKWSFFG ARVMHNLTLN NASSFGSFHL IRMLLDEYIL ENSBTAP00000000329/1-927 NGRSLKKRAQ DFLLKWSFFG ARVMHNLTLN NASSFGSFHL IRMLLDEYIL ENSTTRP00000010479/1-932 NGRSLKKRAQ DFLLKWSFFG ARVMHNLTLN NASSFGSFHL IRMLLDEYIL bmy_06837T0/1-992 NGRSLKKRAQ DFLLKWSFFG ARVMHNLTLN NASSFGSFHL IRMLLDEYIL BACU014248/1-928 NGRSLKKRAQ DFLLKWSFFG ARVMHNLTLN NASSFGSFHL IRMLLDEYIL 651 700 ENSP00000332208/1-928 LAMETQFNND KEQELQNLLD KYMKNSDASK AAFTASPSSC FLANRNKGSM ENSBTAP00000000329/1-927 LAMETQFNND KEQELQNLLD KYMKNSDASK AAFTASPSSC FLANRNKGST ENSTTRP00000010479/1-932 LAMETQFNND KEQELQNLLD KYMKNSDASK AAFTASPSSC FLANRNKGST bmy_06837T0/1-992 LAMETQFNND KEQELQNLLD KYMKNSDASK AAFTASPSSC FLANRNKGST BACU014248/1-928 LAMETQFNND KEQELQNLLD KYMKNSDASK AAFTASPSSC FLANRNKGST 701 750 ENSP00000332208/1-928 VSSDAVKNES HVETTYLPLP SSQPGGLGPA LHQFPAGNTD NMPLTGQMEL ENSBTAP00000000329/1-927 VPSDTVKNES HVETTYLPLS SSQPGGLTSA LHLFPAGNTD NMPLPGQMEL ENSTTRP00000010479/1-932 VPSDTVKNES HVETTYLPLS SSQPGGLTSA LHPFPAGNTD NMPLTGPMEL bmy_06837T0/1-992 VPSDTVKNES HVETAYLPLS SSQPGGLTSA LHPFPAGNTD NMPLTGQMEL BACU014248/1-928 VPSDTVKNES HVETAYLPLS SSQPGGLTSA LHPFPAGNTD NMPLTGQMEL 751 800 ENSP00000332208/1-928 SQIAGHLMTP PISPAMASRG SVINQGPMAG RPPSVGPVLS APSHCSTYPE ENSBTAP00000000329/1-927 SQSSGHLMTP PISPAMASRG SVINQGPMAG RPPSVGPVLS APSHCSAYSE ENSTTRP00000010479/1-932 SQSSGHLMTP PISPAMASRG SVINQGPMAG RPPSVGPVLS APAHCSAYSE bmy_06837T0/1-992 SQSSGHLMTP PISPAMASRG SVINQGPMAG RPPSVGPVLS APSHCSAYSE BACU014248/1-928 SQSSGHLMTP PISPAMASRG SVINQGPMAG RPPSVGPVLS APPHCSAYSE 801 850 ENSP00000332208/1-928 PIYPTLPQAN HDFYSTSSNY QTVFRAQPHS TSGLYPHHTE HGRCMAWTEQ ENSBTAP00000000329/1-927 PIYPTFPQAS HDFYGTNSNY QTVFRTQPHT PSGLYPHRPE HSRCMVWSDQ ENSTTRP00000010479/1-932 PVYPTLPQAN HDFYGTNSNY QTVFRAQPHT PSGLYPHRPE HSRCMVWSEQ bmy_06837T0/1-992 PVYPTLPQAN HDFYGTNSNY QTVFRAQPHT PSGLYPHRPE HSRCMVWSEQ BACU014248/1-928 PVYPTLPQAN HDFYGTNSNY QTVFRAQPHT PPGLYPHRPE HSRCMVWSEQ 851 900 ENSP00000332208/1-928 QLSRDFFSGS CAGSPYNSRP PSSYGPSLQA QDSHNMQFLN TGSFNFLSNT ENSBTAP00000000329/1-927 QLSRDFFSGS CAGSPYNSRP PSSYGPSPHG QDPHSLQFLN TGGFNFLSNA ENSTTRP00000010479/1-932 QLSRDFFSGS CAGSPYNSRP SSSYGPSPHG QDSHSMQFLN TGSFNFLSNT bmy_06837T0/1-992 QLSRDFFSGS CAGSPYNSRP SSSYGPSPHG QDSHSMQFLN TGSFNFLSNA BACU014248/1-928 QLSRDFFSGS CAGSPYNSRP SSSYGPSPHG QDSHNMQFLN TGSFNFLSNA 901 950 ENSP00000332208/1-928 GAASCQGATL PPNSPNGYYG SNINYPESHR LGSMVNQHVS VISSIRSLPP ENSBTAP00000000329/1-927 GGASCQGATL PPNSPNGYYG GNVNYPESHR LGSMVNQHVS VISSVRSLPP ENSTTRP00000010479/1-932 GAASCQGATL PPNSPNGYYG SNVNYPESHR LGSMVNQHVS VISSVRSLPP bmy_06837T0/1-992 GAASCQGATL PPNSPNGYYG SNVNYPESHR LGSMVNQHVS VISSVRSLPP BACU014248/1-928 GAASCQGATL PPNSPNGYYG SNINYPESHR LGSMVNQHVS VISSVRSLPP 951 1000 ENSP00000332208/1-928 YSDIHDPLNI LDDSGRKQTS SFYTDTSSPV ACRTPVLASS LQTPIPSSSS ENSBTAP00000000329/1-927 YGDIHDPLNI LDDGSRKQTS SFYADTPPSV ACRTPVVASS LQTPIPSSSS ENSTTRP00000010479/1-932 YGDIHDPLNL LDDGSRKQTS SFYADTPAAV ACRTPVVASS LQTPNPSSSS bmy_06837T0/1-992 YGDIHDPLNI LDDGSRKQTS SFYADTPPAV ACRTPVVASS LQTPIPSSSS BACU014248/1-928 YGDIHDPLNI LDDGSRKQTS SFYADTPPAV ACRTPVVASS LQTPIPSSSS 1001 1050 ENSP00000332208/1-928 QCMYGTSNQY PAQETLDSHG TSSREMVSSL PPINTVFMGT AAGGT ENSBTAP00000000329/1-927 QCMYGTSNQY PAQEPLDSHG ANGREMVSSL PPINTVFMGT AAGGT ENSTTRP00000010479/1-932 QCMYGTSNQY PVQETLDSHG ANGREMASSL PPINTVFMGT AAGGT bmy_06837T0/1-992 QCMYGTSNQY PAQETLDSHG ANGREMASSL PPINTVFMGT AAGGT BACU014248/1-928 QCMYGTSNQY PAQETLDSHG ANGREMASSL PPINTVFMGT AAGGT