KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:11:00 2014 Check: 00 .. Name: BACU009477/1-384 Len: 458 Check: 3052 Weight: 1.00 Name: ENSBTAP00000000335/1-398 Len: 458 Check: 5850 Weight: 1.00 Name: bmy_03772T0/1-330 Len: 458 Check: 4209 Weight: 1.00 Name: ENSTTRP00000010010/1-395 Len: 458 Check: 4943 Weight: 1.00 // 1 50 BACU009477/1-384 MFRAIGSADD EEEQAEEACP ELVPIKTKQR E--EKEETSG PGAKIPVTII ENSBTAP00000000335/1-398 MSRAVDSADE EEEQAEEDCP ELVPIEAKQR EVKEEEEKSG PGAKIPVTII bmy_03772T0/1-330 MFHAIGSADD EEEQAEEDCP ELVPIKTKQR E--EKEETSG PGAKIPVTII ENSTTRP00000010010/1-395 MFHGIGSADG EEEQAEEDCP ELVPIKTKQR E--EKEETSG PGAKIPVTII 51 100 BACU009477/1-384 TGYL------ ---------- ---------- ---GSALEKS LAVSQGGELY ENSBTAP00000000335/1-398 TGYLGAGKTT LLNYILTEQH SKRIAVILNE FGEGSAVEKS LAVSQDGELY bmy_03772T0/1-330 TGYL------ ---------- ---------- ---GSALEKS LAVSQGGELY ENSTTRP00000010010/1-395 TGYLGAGKTT LLNYILTEQH SKRIAVILNE FGEGSALEKS LAVSQGGELY 101 150 BACU009477/1-384 EEWLELRNGC LCCSVKDSGL RAIENLMQKK GKFDYILLET TGLADPGAVA ENSBTAP00000000335/1-398 EEWLELRNGC LCCSVKDNGL RAIENLMKKK GKFDYILLET TGLADPGAVA bmy_03772T0/1-330 EEWLELRNGC LCCSVKDSGL RAIENLMQKK GKFDYILLET TGLADPGAVA ENSTTRP00000010010/1-395 EEWLELRNGC LCCSVKDSGL KAIENLMQKK GKFDYILLET TGLADPGAVA 151 200 BACU009477/1-384 SMFWVDAELG VDIYLDGIIT VVDSKYGLNH LAEEKPDGLI NEASRQVALA ENSBTAP00000000335/1-398 SMFWVDAELG VDIYLDGIIT VVDSKYGLKH LAEEKPDGLI NEASRQVALA bmy_03772T0/1-330 SMFWVDAELG VDIYLDGIIT VVDSKYGLNH LAEEKPDGLI NEASRQVALA ENSTTRP00000010010/1-395 SMFWVDAELG VDIYLDGIIT VVDSKYGLNH LAEEKPDGLI NEASRQVALA 201 250 BACU009477/1-384 DIIILNKTDL VSEEDLSKLR TTIRSTNGLG KILETQRSRV DLSSILDLHA ENSBTAP00000000335/1-398 DIIIINKTDL VSEEDLNKLR TTVRSINGLG KILETQRSRV DLAKVLDLHA bmy_03772T0/1-330 DIIILNKTDL VSEEDLNKLR TTIRSTNGLG KILETQRSRV DLSSILDLHA ENSTTRP00000010010/1-395 DIIILNKTDL VSEEDLNKLR TTVRSTNGLG KILETQKSRV DLSSILDLHA 251 300 BACU009477/1-384 FDSLSGIRQN ICKVLSPFPP PDLPPSVSKD KENSCSAIGQ CPVSWIGVWS ENSBTAP00000000335/1-398 FDSLSGISLQ KKLQHVPTTQ PHL------- ---------- ---------- bmy_03772T0/1-330 FDSLSGISLQ RKLQNVPTTP PHL------- ---------- ---------- ENSTTRP00000010010/1-395 FDSLSGISLQ RKLQSVPTTQ PHL------- ---------- ---------- 301 350 BACU009477/1-384 QETKQEDIAE VQVPCDEGLI HAGYSENGNG IKRAQSIVTV TFEVPGNAKE ENSBTAP00000000335/1-398 ---------- ---------- ---------- ---DQSIITV TFEVPGNAEE bmy_03772T0/1-330 ---------- ---------- ---------- ---DQSIVTV TFEVPGNAKE ENSTTRP00000010010/1-395 ---------- ---------- ---------- ---DQSIITV TFEVPGNAKE 351 400 BACU009477/1-384 ESLNVYIQ-- ---------- ---------- GLVSLKDKPQ QVIVQGVHEL ENSBTAP00000000335/1-398 ESLNVYIQNL LWEKNVRNRD DACMEVIRLK GLVSIKDKPQ QVIVQGVHEL bmy_03772T0/1-330 ESLNVYIQNL LWEKNVRNRD DDCMEVIRLK ---------- ---------- ENSTTRP00000010010/1-395 ESLNVYIQNL LWEKNVRNRD DDCMEVIRLK GLVSIKDKPQ QVIVQGVHEL 401 450 BACU009477/1-384 YDLEETSVSW EDDSKRTNRL VLIERNGEKS DI--LFSVQ- ---------- ENSBTAP00000000335/1-398 YDLEETPVNW EDDSERTNRL VLIGRNLDKD ILKQLFIATV TETEKRWTTH bmy_03772T0/1-330 ---------- -------VQY IAYSRNLDKD ILKQLFIATV TETEKQWTTH ENSTTRP00000010010/1-395 YDLEETPVSW EHDSERTNRL VFIGRNLDKD ILKQLFIATV TETENQ-TTH 451 500 BACU009477/1-384 -------- ENSBTAP00000000335/1-398 FQEDQVCP bmy_03772T0/1-330 FKEDQVCP ENSTTRP00000010010/1-395 FKEDQVCP