KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:11:00 2014 Check: 00 ..
Name: BACU009477/1-384 Len: 458 Check: 3052 Weight: 1.00
Name: ENSBTAP00000000335/1-398 Len: 458 Check: 5850 Weight: 1.00
Name: bmy_03772T0/1-330 Len: 458 Check: 4209 Weight: 1.00
Name: ENSTTRP00000010010/1-395 Len: 458 Check: 4943 Weight: 1.00
//
1 50
BACU009477/1-384 MFRAIGSADD EEEQAEEACP ELVPIKTKQR E--EKEETSG PGAKIPVTII
ENSBTAP00000000335/1-398 MSRAVDSADE EEEQAEEDCP ELVPIEAKQR EVKEEEEKSG PGAKIPVTII
bmy_03772T0/1-330 MFHAIGSADD EEEQAEEDCP ELVPIKTKQR E--EKEETSG PGAKIPVTII
ENSTTRP00000010010/1-395 MFHGIGSADG EEEQAEEDCP ELVPIKTKQR E--EKEETSG PGAKIPVTII
51 100
BACU009477/1-384 TGYL------ ---------- ---------- ---GSALEKS LAVSQGGELY
ENSBTAP00000000335/1-398 TGYLGAGKTT LLNYILTEQH SKRIAVILNE FGEGSAVEKS LAVSQDGELY
bmy_03772T0/1-330 TGYL------ ---------- ---------- ---GSALEKS LAVSQGGELY
ENSTTRP00000010010/1-395 TGYLGAGKTT LLNYILTEQH SKRIAVILNE FGEGSALEKS LAVSQGGELY
101 150
BACU009477/1-384 EEWLELRNGC LCCSVKDSGL RAIENLMQKK GKFDYILLET TGLADPGAVA
ENSBTAP00000000335/1-398 EEWLELRNGC LCCSVKDNGL RAIENLMKKK GKFDYILLET TGLADPGAVA
bmy_03772T0/1-330 EEWLELRNGC LCCSVKDSGL RAIENLMQKK GKFDYILLET TGLADPGAVA
ENSTTRP00000010010/1-395 EEWLELRNGC LCCSVKDSGL KAIENLMQKK GKFDYILLET TGLADPGAVA
151 200
BACU009477/1-384 SMFWVDAELG VDIYLDGIIT VVDSKYGLNH LAEEKPDGLI NEASRQVALA
ENSBTAP00000000335/1-398 SMFWVDAELG VDIYLDGIIT VVDSKYGLKH LAEEKPDGLI NEASRQVALA
bmy_03772T0/1-330 SMFWVDAELG VDIYLDGIIT VVDSKYGLNH LAEEKPDGLI NEASRQVALA
ENSTTRP00000010010/1-395 SMFWVDAELG VDIYLDGIIT VVDSKYGLNH LAEEKPDGLI NEASRQVALA
201 250
BACU009477/1-384 DIIILNKTDL VSEEDLSKLR TTIRSTNGLG KILETQRSRV DLSSILDLHA
ENSBTAP00000000335/1-398 DIIIINKTDL VSEEDLNKLR TTVRSINGLG KILETQRSRV DLAKVLDLHA
bmy_03772T0/1-330 DIIILNKTDL VSEEDLNKLR TTIRSTNGLG KILETQRSRV DLSSILDLHA
ENSTTRP00000010010/1-395 DIIILNKTDL VSEEDLNKLR TTVRSTNGLG KILETQKSRV DLSSILDLHA
251 300
BACU009477/1-384 FDSLSGIRQN ICKVLSPFPP PDLPPSVSKD KENSCSAIGQ CPVSWIGVWS
ENSBTAP00000000335/1-398 FDSLSGISLQ KKLQHVPTTQ PHL------- ---------- ----------
bmy_03772T0/1-330 FDSLSGISLQ RKLQNVPTTP PHL------- ---------- ----------
ENSTTRP00000010010/1-395 FDSLSGISLQ RKLQSVPTTQ PHL------- ---------- ----------
301 350
BACU009477/1-384 QETKQEDIAE VQVPCDEGLI HAGYSENGNG IKRAQSIVTV TFEVPGNAKE
ENSBTAP00000000335/1-398 ---------- ---------- ---------- ---DQSIITV TFEVPGNAEE
bmy_03772T0/1-330 ---------- ---------- ---------- ---DQSIVTV TFEVPGNAKE
ENSTTRP00000010010/1-395 ---------- ---------- ---------- ---DQSIITV TFEVPGNAKE
351 400
BACU009477/1-384 ESLNVYIQ-- ---------- ---------- GLVSLKDKPQ QVIVQGVHEL
ENSBTAP00000000335/1-398 ESLNVYIQNL LWEKNVRNRD DACMEVIRLK GLVSIKDKPQ QVIVQGVHEL
bmy_03772T0/1-330 ESLNVYIQNL LWEKNVRNRD DDCMEVIRLK ---------- ----------
ENSTTRP00000010010/1-395 ESLNVYIQNL LWEKNVRNRD DDCMEVIRLK GLVSIKDKPQ QVIVQGVHEL
401 450
BACU009477/1-384 YDLEETSVSW EDDSKRTNRL VLIERNGEKS DI--LFSVQ- ----------
ENSBTAP00000000335/1-398 YDLEETPVNW EDDSERTNRL VLIGRNLDKD ILKQLFIATV TETEKRWTTH
bmy_03772T0/1-330 ---------- -------VQY IAYSRNLDKD ILKQLFIATV TETEKQWTTH
ENSTTRP00000010010/1-395 YDLEETPVSW EHDSERTNRL VFIGRNLDKD ILKQLFIATV TETENQ-TTH
451 500
BACU009477/1-384 --------
ENSBTAP00000000335/1-398 FQEDQVCP
bmy_03772T0/1-330 FKEDQVCP
ENSTTRP00000010010/1-395 FKEDQVCP