KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:01 2014 Check: 00 .. Name: ENSP00000210187/1-256 Len: 287 Check: 943 Weight: 1.00 Name: ENSBTAP00000000348/1-256 Len: 287 Check: 1457 Weight: 1.00 Name: ENSTTRP00000014773/1-184 Len: 287 Check: 6234 Weight: 1.00 Name: bmy_02710T0/1-286 Len: 287 Check: 6420 Weight: 1.00 Name: BACU009208/1-257 Len: 287 Check: 3739 Weight: 1.00 // 1 50 ENSP00000210187/1-256 MSRKKTPKSK GASTPAASTL PTANGARPAR SGTALSGPDA PPNGPLQPGR ENSBTAP00000000348/1-256 MSRKKTPKSK AGSAPATSAL PAANGPRPVR PGTARPGPEA PPNGPPQPGR ENSTTRP00000014773/1-184 MSRKKTPKSK RGSAPATSAL PATHGSQPVR PGTARPGPEA PPNRPPQPGR bmy_02710T0/1-286 MSRKKTPKSK GGSAPATSAL PATHGSRPVR PGAARPGPDA PPNGPPQPGR BACU009208/1-257 MSRKKTPKSK GGSAPATSAL PATHGSRPVR PGTARPGPDA PPNGPPQPGR 51 100 ENSP00000210187/1-256 PSL-GGGVDF YDVAFKVMLV GDSGVGKTCL LVRFKDGAFL AGTFISTVGI ENSBTAP00000000348/1-256 SSV-GGGGDF YDVAFKVMLV GDSGVGKTCL LVRFKDGAFL AGTFISTVGI ENSTTRP00000014773/1-184 SSL-GGGGDF YDVAFKVMLV GDSGVGKTCL LVRFKDGAFL AGTFISTVGI bmy_02710T0/1-286 SSL-GGGGDF YDVAFKVMLV GDSGVGKTCL LVRFKDGAFL AGTFISTVGI BACU009208/1-257 SSLGGGGGDF YDVAFKVMLV GDSGVGKTCL LVRFKDGAFL AGTFISTVGI 101 150 ENSP00000210187/1-256 DFRNKVLDVD GVKVKLQMWD TAGQERFRSV THAYYRDAHA LLLLYDVTNK ENSBTAP00000000348/1-256 DFRNKVVDVD GMKVKLQIWD TAGQERFRSV THAYYRDAHA LLLLYDVTNK ENSTTRP00000014773/1-184 DFRNKVLDLN GMNV-LQIWD TAGQERFRSV THAYYRDAHA LLLLYDVTNK bmy_02710T0/1-286 DFRNKVLDVD GMKVKLQIWD TAGQERFRSV THAYYRDAHA LLLLYDVTNK BACU009208/1-257 DFRNKVLDVD GMKVKLQIWD TAGQERFRSV THAYYRDAHA LLLLYDVTNK 151 200 ENSP00000210187/1-256 ASFDNIQAWL TEIHEYAQHD VALMLLGNKV DSAHERVVKR EDGEKLAK-- ENSBTAP00000000348/1-256 ASFDSIQAWL TEIQEHAQDD VVLMLLGNKV DSAQERAVKR EDAEKLAK-- ENSTTRP00000014773/1-184 ASFNSIQAWL TEIQEYAQHD VVLMLLGNKV DSAQER---- ---------- bmy_02710T0/1-286 ASFDSIQAWL TEIQEYAQHD VVLMLLGNKV DSAQERVVKR EDGEKLAKVS BACU009208/1-257 ASFNSIQAWL TEIQEYAQHD VVLMLLGNKV DSAQERVVKR EDGEKLAK-- 201 250 ENSP00000210187/1-256 ---------- ---------- --------EY GLPFMETSAK TGLNVDLAFT ENSBTAP00000000348/1-256 ---------- ---------- --------DY GLPFMETSAK TGLNVDLAFT ENSTTRP00000014773/1-184 ---------- ---------- ---------- ---------- ---------- bmy_02710T0/1-286 CGWVGSQRAP LGLQGLSCPH QVANGCLQEY GLPFMETSAK TGLNVDLAFM BACU009208/1-257 ---------- ---------- --------EY GLPFMETSAK TGLNVDLAFM 251 300 ENSP00000210187/1-256 AIAKELKQRS MKAPSEPRFR LHDYVKREGR GASCCRP ENSBTAP00000000348/1-256 AIAKELKQRH TKAPSEPRFQ LHDYIKREGR GASCCRP ENSTTRP00000014773/1-184 ---------- ---------- ---------- ------- bmy_02710T0/1-286 AIAKELKQRC MKAPSEPRFQ LHDYVKREGR GASCCKP BACU009208/1-257 AIAKELKQRC MKAPTEPRFQ LHDYVKREGR GASCCKP