KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:01 2014 Check: 00 .. Name: ENSTTRP00000015206/1-554 Len: 555 Check: 5456 Weight: 1.00 Name: ENSP00000327513/1-554 Len: 555 Check: 1173 Weight: 1.00 Name: ENSBTAP00000000353/1-554 Len: 555 Check: 2928 Weight: 1.00 Name: bmy_11919T0/1-554 Len: 555 Check: 5796 Weight: 1.00 Name: BACU002732/1-513 Len: 555 Check: 1597 Weight: 1.00 // 1 50 ENSTTRP00000015206/1-554 MTARGAAGRC PPTTWLGRLL LLACLLVNRS TTEEVSENCS HMIGNGHLQV ENSP00000327513/1-554 MTAPGAAGRC PPTTWLGSLL LLVCLLASRS ITEEVSEYCS HMIGSGHLQS ENSBTAP00000000353/1-554 MTARGAAGRC PPTTWLGPLL LLACLLVSNG ATEEVSENCS HMIGNGHLLF bmy_11919T0/1-554 MTARGAAGRC PPTTWLGPLL LLACLLVSRS TTEEVSENCS HMIGNGHLQF BACU002732/1-513 ---------- ---------- ---------- ---------- -MIGNGHLQF 51 100 ENSTTRP00000015206/1-554 LQKLIDSQME TSCQIAFEFV DQEQLNDPVC YLKKAFLLVQ DIMEDTMRFR ENSP00000327513/1-554 LQRLIDSQME TSCQITFEFV DQEQLKDPVC YLKKAFLLVQ DIMEDTMRFR ENSBTAP00000000353/1-554 LQQLIDSQME TSCQISFEFV DQEQLDDPVC YLKKAFLLVQ DIMEDTMRFK bmy_11919T0/1-554 LQQLIDSQME TSCQIAFEFV DQEQLNDPVC YLKKAFLLVQ DIMEDTMRFK BACU002732/1-513 LQQLIDSQME TSCQIAFEFV DQEQLNDPVC YLKKAFLLVQ DIMEDTMRFK 101 150 ENSTTRP00000015206/1-554 DNTPNAAVIV QLQELSLRLR SCFTRDYEGQ DKACVRTFYE TPLQLLEKIK ENSP00000327513/1-554 DNTPNAIAIV QLQELSLRLK SCFTKDYEEH DKACVRTFYE TPLQLLEKVK ENSBTAP00000000353/1-554 DNTPNAKVIV QLQELSLRLK SCFTMDYDEQ DKACVRTFHE TPLQLLEKIK bmy_11919T0/1-554 DNTPNANVIV QLQELSLRLR SCFTRDYEEQ DKACVRTFYE TPLQLLEKIK BACU002732/1-513 DNTPNANVIV QLQELSLRLR SCFTRDYEEQ DKACVRTFYE TPLQLLEKIK 151 200 ENSTTRP00000015206/1-554 NVFNETKNLL KKNWNIFSKN CNNSFAKCSS QXXXXXXXXX XXXXXXXXXX ENSP00000327513/1-554 NVFNETKNLL DKDWNIFSKN CNNSFAECSS QDVVTKPDCN CLYPKAIPSS ENSBTAP00000000353/1-554 NVFNETKNLL KKDWNIFSKN CNNSFAKCSS HDVVTKPDCN CLYPKATPSS bmy_11919T0/1-554 NVFNETKNLL KKDWNIFSKN CNNSFAKCSS QDVVTKPDCN CLYPKATPSS BACU002732/1-513 NVFNETKNLL KKDWNIFSKN CNNSFAKCSS QDVVTKPDCN CLYPKATPSS 201 250 ENSTTRP00000015206/1-554 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000327513/1-554 DPASVSPHQP LAPSMAPVAG LTWEDSEGTE GSSLLPGEQP LHTVDPGSAK ENSBTAP00000000353/1-554 DLASVSPQQS PTPSTAPMAG LTWADSEATD GSSLLPREQA LRTVDPGSAK bmy_11919T0/1-554 DLASVSPQQP LAPSMAPMAG LTWADSEGTE GSSLLPREQA LRTVDPGSAK BACU002732/1-513 DLASVSPQQP LAPSMAPMAG LTWADSEGTE GSSLLPREQA LRTVDPGSAK 251 300 ENSTTRP00000015206/1-554 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000327513/1-554 QRPPRSTCQS FEPPETPVVK DSTIGGSPQP RPSVGAFNPG MEDILDSAMG ENSBTAP00000000353/1-554 QRPPRSTCQS FESPETPRVE GRPTGDSPQP GPSVGAPVTG MEDVLDSLLG bmy_11919T0/1-554 QRPPRSTCQS FESPETLGVE GRPTGGSPQP QHSVGAPVTG MEDILDSVLG BACU002732/1-513 QRPPRSTCQS FESPETLGVE GHPTGDSPQP QHSVGAPVTG MEDILDSVLG 301 350 ENSTTRP00000015206/1-554 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000327513/1-554 TNWVPEEASG EASEIPVPQG TELSPSRPGG GSMQTEPARP SNFLSASSPL ENSBTAP00000000353/1-554 ANIALEEASG EASEGPIPQG AELSFYSLGG RSVQAEPASP SHTPPASSAL bmy_11919T0/1-554 TNLALEEASG EASEGLIPQG AELASRTLRG GSVQAETAWP SRLLSTSSPL BACU002732/1-513 TNLALEEASG EASEGLIPQR AELASRTLRG GSVQAETAWP SRLLSASSPV 351 400 ENSTTRP00000015206/1-554 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000327513/1-554 PASAKGQQPA DVTGTALPRV GPVRPTGQDW NHTPQKTDHP SALLRDPPEP ENSBTAP00000000353/1-554 SGSGKGLRLV DATSAHLPTL GPMRPT-EAW SHTPEKTERP SASPRDHQEP bmy_11919T0/1-554 SASGKGWQPA DVTSTPLPMV GPVRPT-EAW SHTPENADHS SASPRDHQEP BACU002732/1-513 SASGKGWQPA DVTSTPLPMV GPVRPT-EAW SHTPENADHS SASPRDHQEP 401 450 ENSTTRP00000015206/1-554 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000327513/1-554 GSPRISSLRP QGLSNPSTLS AQPQLSRSHS SGSVLPLGEL EGRRSTRDRR ENSBTAP00000000353/1-554 DMAKTPALHP QGLSSPSALS SQPKLPRSHS WGHVLSLGEL EGRRSTRDRR bmy_11919T0/1-554 GSAGAPALRP HGLSSPSAPS SQPRLPRSHS WGNVLPLGEL EGKRSTRDRR BACU002732/1-513 GSAGAPALRP HGLSSPSAPS SQPRLPRSHS WGNVLPLGEL EGKRSTRDRR 451 500 ENSTTRP00000015206/1-554 XXXEL-GGQA SEGAAKPPAR FNSVPLTDAG HERQHKDPSD PQLPGFVFRL ENSP00000327513/1-554 SPAEPEGGPA SEGAARPLPR FNSVPLTDTG HERQSEGSFS PQLQESVFHL ENSBTAP00000000353/1-554 SLAELKGGQA SEGAARPPAR FNSVPLTDTG HERQHKEASD PQLPGFVFRL bmy_11919T0/1-554 STAELEGGQA SEGVARPPAR FNSVPLTDAG HERQHKEPSD PQLPGFVFRL BACU002732/1-513 STAELEGGQA SEGAARPPAR FNSVPLTDAG RERQHKEPSD PQLPGFVFRL 501 550 ENSTTRP00000015206/1-554 LVPSIILVLL AVGGLLFYRR RRRSHREPQT VDSPMEQPEG SPLTQDEDRQ ENSP00000327513/1-554 LVPSVILVLL AVGGLLFYRW RRRSHQEPQR ADSPLEQPEG SPLTQD-DRQ ENSBTAP00000000353/1-554 LVPSIILVLL AVGGLLFYRR RRRSHQEPQM VDSPMEQPEG SLLTQEEDRQ bmy_11919T0/1-554 LVPSIILVLL AVGGLLFYRR RRRSHREPQT VDSPMEQPEG SPLTQDEDRQ BACU002732/1-513 LVPSIILVLL AVGGLLFYRR RRRSHREPQT VDSPMEQPEG SPLTQDEDRQ 551 600 ENSTTRP00000015206/1-554 VDLPV ENSP00000327513/1-554 VELPV ENSBTAP00000000353/1-554 EELPV bmy_11919T0/1-554 VELPV BACU002732/1-513 VELPV