KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:02 2014 Check: 00 .. Name: ENSP00000432481/1-740 Len: 748 Check: 5516 Weight: 1.00 Name: ENSBTAP00000000354/1-740 Len: 748 Check: 3797 Weight: 1.00 Name: bmy_11650T0/1-642 Len: 748 Check: 8432 Weight: 1.00 Name: BACU013276/1-741 Len: 748 Check: 4314 Weight: 1.00 Name: ENSTTRP00000004180/1-740 Len: 748 Check: 8986 Weight: 1.00 // 1 50 ENSP00000432481/1-740 MAESRGRLYL WMCLAAALAS FLMGFMVGWF IKPLKETTTS VRYHQSIRWK ENSBTAP00000000354/1-740 MATSGRRPYL WIFLAAALAS FLAGFTVGWL SKPLKDTATS ADSHQNLRWK bmy_11650T0/1-642 MAKSRGRLYL GMCLAAALAS FLGGFM---- ---------- ---------- BACU013276/1-741 MAKSRGRLHL GMCLAAALAS FLGGFMVGWL SKPLKETATS VDTHQNLRWK ENSTTRP00000004180/1-740 MAKSRGRLHL WVCLAAALAS FLGGFMVGWL SKPLKETATS GDTHQNLRWK 51 100 ENSP00000432481/1-740 LVSEMKAENI KSFLRSFTKL PHLAGTEQNF LLAKKIQTQW KKFGLDSAKL ENSBTAP00000000354/1-740 LISEMKADNI KSFLRSFTKL PHLAGTEQNL LLAKKIQNQW KKFGLDSAEL bmy_11650T0/1-642 ---------- ---------- ---------- ---------- ---------- BACU013276/1-741 LVSEMKAENI KSFLRSFTEL PHLAGTEQNL LLAKKIQTQW KKSGLDSAKL ENSTTRP00000004180/1-740 LVSEMKAENI KSFLRSFTEL PHLAGTEQNL LLAKKIQTQW KKSGLDSAKL 101 150 ENSP00000432481/1-740 VHYDVLLSYP NETNANYISI VDEHETEIFK TSYLEPPPDG YENVTNIVPP ENSBTAP00000000354/1-740 VHYDVLLSYP NETNANYISV TDEHGIEIFN TSYIEPPPDG YENVKNIVPP bmy_11650T0/1-642 ---------- ---------- -------IFN TSYHEPPPDG YENVKNIVPP BACU013276/1-741 VHYDVLLSYP NETNANYISI TDEHGNEIFN TSYHEPPPDG YENVKNIVPP ENSTTRP00000004180/1-740 VHYDVLLSYP NETNANYISI TDEHGNEIFN TSYHEPPPDG YEDVKNIVPP 151 200 ENSP00000432481/1-740 YNAFSAQGMP EGDLVYVNYA RTEDFFKLER EMGINCTGKI VIARYGKIFR ENSBTAP00000000354/1-740 YNAFSPAGVP EGELVYVNYA RTEDFFKLER EMNINCTGKI VIARYGRIFR bmy_11650T0/1-642 YNAFSPQGTP EGELVYVNYA RTEDFFKLER EMNINCTGKI VIARYGKIFR BACU013276/1-741 YNAFSPQGTP EGELVYVNYA RTEDFFKLER EMNINCTGKI VIARYGKIFR ENSTTRP00000004180/1-740 YNAFSPQGTP EGELVYVNYA RTEDFFKLER EMNINCTGKI VIARYGKIFR 201 250 ENSP00000432481/1-740 GNKVKNAMLA GAIGIILYSD PADYFAPEVQ PYPKGWNLPG TAAQRGNVLN ENSBTAP00000000354/1-740 GNKVKNAMLA GAKGIILYSD PADYSAPGVQ PYPKGWNLPG TVAQRGNVLN bmy_11650T0/1-642 GNKVKNAMLA RAKGIILYSD PADYSAPGVQ PYPKGWNLPG TAAQRGNVLN BACU013276/1-741 GNKVKNAMLA RAKGIILYSD PADYSAPGVQ PYPKGWNLPG TAAQRGNVLN ENSTTRP00000004180/1-740 GNKVKNAMLA RAKGIILYSD PADYSAPGVQ PYPKGWNLPG TAAQRGNVLN 251 300 ENSP00000432481/1-740 LNGAGDPLTP GYPAKEYTFR -------LDV EEGVGIPRIP VHPIGYNDAE ENSBTAP00000000354/1-740 LDGAGDPLTP GYPAKEYTFR -------LDV EDGVGIPQIP VHPIGYNDAE bmy_11650T0/1-642 LNGAGDPLTP GYPAKVLNFH EVWTWRGEGV SSILSLPLVE VQKHRFSCPN BACU013276/1-741 LNGAGDPLTP GYPAKEYTFR -------LDV EEGVGIPQIP VHPIGYNDAE ENSTTRP00000004180/1-740 LNGAGDPLTP GYPAKEYTFR -------LDV EEGVGIPQIP VHPIGYNDAE 301 350 ENSP00000432481/1-740 ILLRYLGGIA PPDKSWKGAL NVSYSIGPGF TGSDSFRKVR MHVYNINKIT ENSBTAP00000000354/1-740 IFLRYLGGIA SPDESWKGGL NVSYNIGPGF VGHDSFRKVR MHVYNINKIT bmy_11650T0/1-642 ----YLGGTA PPDESWKGSL KVNYNIGPGF IGHDSFRKVR MHVHNINKIT BACU013276/1-741 ILLRYLGGTA PPDESWKGSL KVNYNIGPGF IGHDSFRKVR MHVHNINKIT ENSTTRP00000004180/1-740 ILLRYLGGTA PPDESWKGSL KVNYNIGPGF IGHDSFRKVR MRVHNINKIT 351 400 ENSP00000432481/1-740 RIYNVVGTIR GSVEPDRYVI LGGHRDSWVF GAIDPTSGVA VLQEIARSFG ENSBTAP00000000354/1-740 RIYNVIGTIR GSVEPDRYVI LGGHRDSWVF GGIDPTSGAA TLQEVAQSFG bmy_11650T0/1-642 RIYNVIGTIR GSVEPDRYVI LGGHRDSWVF GGIDPTSGAS VLQEVVQSFG BACU013276/1-741 RIYNVIGTIR GSVEPDRYVI LGGHRDSWVF GGIDPTSGAS VLQEVVQSFG ENSTTRP00000004180/1-740 RIYNVIGTIR GSVEPDRYVI LGGHRDSWVF GGIDPTSGAS VLQEVVQSFG 401 450 ENSP00000432481/1-740 KLMSKGWRPR RTIIFASWDA EEFGLLGSTE WAEENVKILQ ERSIAYINSD ENSBTAP00000000354/1-740 KLLSSGWRPR RTIIFASWDA EEFGLLGSTE WAEENVKTLQ ERSVAYINSD bmy_11650T0/1-642 KLMSRGWRPR RTIIFASWDA EEFGLLGSTE WAEENVKSLQ DRSVAYINSD BACU013276/1-741 KLMSRGWRPR RTIIFASWDA EEFGLLGSTE WAEENVKSLQ ERSVAYINSD ENSTTRP00000004180/1-740 KLMSRGWRPR RTIIFASWDA EEFGLLGSTE WAEENVKSLQ ERSVAYINSD 451 500 ENSP00000432481/1-740 SSIEGNYTLR VDCTPLLYQL VYKLTKEIPS PDDGFESKSL YESWLEKDPS ENSBTAP00000000354/1-740 SSIEGNYTLR VDCTPLLHQL VYKLTKEISS PDDGFESKSL YESWLAKDPS bmy_11650T0/1-642 SSIEGNYTLR VDCTPLLYQL VYKLTKEISS PDDGFESKSL YESWLEKDPS BACU013276/1-741 SSIEGNYTLR VDCTPLLYQL VYKLTKEISS PDDGFESKSL YESWLEKDPS ENSTTRP00000004180/1-740 SSIEGNYTLR VDCTPLLYQL VYKLTKEISS PDDGFESKSL YESWLEKDPS 501 550 ENSP00000432481/1-740 PENKNLPRIN KLGSGSDFEA YFQRLGIASG RARYTKNKKT DKYSSYPVYH ENSBTAP00000000354/1-740 SESKTLPRIN KLGSGSDFEA YFQRLGIASG RVRYTKNRKT DTYSSYPIYH bmy_11650T0/1-642 SENKTLPRIN KLGSGSDFEA YFQRLGIASG RVRYTKNRKT DNYSSYPIYH BACU013276/1-741 SENKTLPRIN KLGSGSDFEA YFQRLGIASG RVRYTKNRKT DNYSSYPTYH ENSTTRP00000004180/1-740 SENKTLPRIN KLGSGSDFEA YFQRLGIASG RVRYTKNRKT DNYSSYPMYH 551 600 ENSP00000432481/1-740 TIYETFELVE KFYDPTFKKQ LSVAQLRGAL VYELVDSKII PFNIQDYAEA ENSBTAP00000000354/1-740 TIYETFELVE KFYDPTFKKQ LAVAQLRGAL VYELADAKII PFNIQDYAKT bmy_11650T0/1-642 TIYETFELVE NFYDPTFKKQ LAVAQLRGAL VYELADSKII PFNIQDYAKT BACU013276/1-741 TIYETFELVE NFYDPTFKKQ LAVAQLRGAL VYELADSKII PFNIQDYAKT ENSTTRP00000004180/1-740 TIYETFELVE NFYDPTFKKQ LAVAQLRGAL VYELADSKII PFNIQDYAKS 601 650 ENSP00000432481/1-740 LKNYAASIYN LSKKHDQQLT DHGVSFDSLF SAVKNFSEAA SDFHKRLIQV ENSBTAP00000000354/1-740 LENYARSIYN SSRKHEQACR GHGVSFESLF SAVQNFSEAA SDFHRRLSQV bmy_11650T0/1-642 LENYATDIYS LSKKYDQQLR DHQVSFDCLF SAVKNFSKSA SDFHRRLSQV BACU013276/1-741 LENYATDIYS LSKKYDQQLR DHQVSFESLF SAVKNFSKSA SDFHRRLSQV ENSTTRP00000004180/1-740 LENYATGIYS LSKKYDQQLR DHQVSFDSLF SAVKNFSKSA SDFHRRLSQV 651 700 ENSP00000432481/1-740 DLNNPIAVRM MNDQLMLLER AFIDPLGLPG KLFYRHIIFA PSSHNKYAGE ENSBTAP00000000354/1-740 DLNNPMVVRI MNDQLMFLER AFIDPLGLPG RPFYRHIIFA PSSRNKYAGE bmy_11650T0/1-642 DLNNPTAVRI MNDQLMFLER AFIDPLGLPG RPFYRHIIFA PSSHNKYAGQ BACU013276/1-741 DLNNPTAVRI MNDQLMFLER AFIDPLGLPG RPFYRHVIFA PSSHNKYAGQ ENSTTRP00000004180/1-740 DLNNPTAVRI MNDQLMFLER AFIDPLGLPG RPFYRHIIFA PSSHNKYAGE 701 750 ENSP00000432481/1-740 SFPGIYDAIF DIENKANSRL AWKEVKKHIS IAAFTIQAAA GTLKEVL- ENSBTAP00000000354/1-740 SFPGIFDAMF DIENKADPHS AWKEVKKHIS IAAFTIQAAA GTLKEFL- bmy_11650T0/1-642 SFPGIFDALF DIENKADPRS AWKEVKKHIS IAAFTIQAAA GTLKEVL- BACU013276/1-741 SFPGIFDALF DIENKADPRS AWKEVKKHIS IAAFTIQAAA GTLKEVLE ENSTTRP00000004180/1-740 SFPGIFDSIF DIENKADPRS AWKEVKKHIS IAAFTIQAAA GTLKELL-