KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:02 2014 Check: 00 .. Name: ENSTTRP00000015182/1-669 Len: 669 Check: 2153 Weight: 1.00 Name: ENSP00000281543/1-669 Len: 669 Check: 2568 Weight: 1.00 Name: ENSBTAP00000000356/1-669 Len: 669 Check: 2972 Weight: 1.00 Name: bmy_11627T0/1-669 Len: 669 Check: 3342 Weight: 1.00 Name: BACU008733/1-560 Len: 669 Check: 4735 Weight: 1.00 // 1 50 ENSTTRP00000015182/1-669 MWTLAGQGCW RRRALASWAT RAARRGLPGP RPAPTRGAAA ESKTPDRSYS ENSP00000281543/1-669 MWTLVGRGWG CARALAPRAT GAALLVAPGP RSAPTLGAAP ESWATDRLYS ENSBTAP00000000356/1-669 MWTLAGQGWW RGRALAAWVT EAARKGLLWP HLAPARGTAA ESRAPDRCYS bmy_11627T0/1-669 MWTLAGQGCW RRRALAAWAT RAARRGLLAP RPAPTRGAAA ESKAPDRSYS BACU008733/1-560 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015182/1-669 SADRKEKIDM SRFSVEYTRN FSIIAHVDQG KSTIADRLLE LTGAIDKTKN ENSP00000281543/1-669 SAEFKEKLDM SRFPVENIRN FSIVAHVDHG KSTLADRLLE LTGTIDKTKN ENSBTAP00000000356/1-669 SADRKEKIDM SCFPVENTRN FSIIAHVDHG KSTLADRLLE LTGAIDKTKN bmy_11627T0/1-669 SADRKEKIDM SKFPVENTRN FSIIAHVDHG KSTLADRLLE LTGAIDKTKN BACU008733/1-560 -----EKIDM SRFPVENTRN FSIIAHVDHG KSTLADRLLE LTGAIDKTKN 101 150 ENSTTRP00000015182/1-669 NKQVLDKLQV ERERGITVKA QTASLFYDYE GKQYLLNFID TPGHVDFSYE ENSP00000281543/1-669 NKQVLDKLQV ERERGITVKA QTASLFYNCE GKQYLLNLID TPGHVDFSYE ENSBTAP00000000356/1-669 NKQVLDKLQV ERERGITVKA QTASLFYNYE GKQYLLNLID TPGHVDFSYE bmy_11627T0/1-669 NKQVLDKLQV ERERGITVKA QTASLFYDYE GKQYLLNLID TPGHVDFSYE BACU008733/1-560 NKQVLDKLQV ERERGITVKA QTASLFYDYE GKQYLLNLID TPGHVDFSYE 151 200 ENSTTRP00000015182/1-669 VNRSLSACQG VLLVVEQNXG IQAQTVANFF LAFEAQLSVI PVINKXXXXX ENSP00000281543/1-669 VSRSLSACQG VLLVVDANEG IQAQTVANFF LAFEAQLSVI PVINKIDLKN ENSBTAP00000000356/1-669 VSRSLSACQG VLLVVDANEG IQAQTVANFF LAFEAQLSII PVINKIDLKN bmy_11627T0/1-669 VSRSLSACQG VLLVVDANEG IQAQTVANFF LAFEAQLSVI PVINKIDLKN BACU008733/1-560 VSRSLSACQG VLLVVDANEG IQAQTVANFF LAFEAQLSVI PVINKIDLKN 201 250 ENSTTRP00000015182/1-669 XXXXXXXXXX XXXXXXXXXX XXXISAKLGT NVESVLQAVI KRIPPPKVHR ENSP00000281543/1-669 ADPERVENQI EKVFDIPSDE CIKISAKLGT NVESVLQAII ERIPPPKVHR ENSBTAP00000000356/1-669 ADPERVEKQI EKVFDIPGDE CIKISAKLGT NVESVLDAVI KRIPFPKAHC bmy_11627T0/1-669 ADPERVEKQI EKVFDIPSDE CIKISAKLGT NVESVLQAVI KRIPPPKVHR BACU008733/1-560 ADPERVEKQI EKVFDIPSDE CIKISAKLGT NVESVLQAVI KRIPPPKVHR 251 300 ENSTTRP00000015182/1-669 KNPLRALVFD STFDQYRGVI ANVALFDGVV SKGDKIVSAH TQKTYEVNEV ENSP00000281543/1-669 KNPLRALVFD STFDQYRGVI ANVALFDGVV SKGDKIVSAH TQKTYEVNEV ENSBTAP00000000356/1-669 RNPLRALVFD STFDQYRGVI ANVALFDGVV SKGDKIVSAH TQKTYEVNEV bmy_11627T0/1-669 KNPLRALVFD STFDQYRGVI ANVALFDGVV SKGDKIVSAQ TQKTYEVNEV BACU008733/1-560 KNPLRALVFD STFDQYRGVI ANVALFDGVV SKGDKIVSAH TQKTYEVNEV 301 350 ENSTTRP00000015182/1-669 GVLNPNEQPT HKLYAGQVGY LIAGMKDVTE AQVGDTLYLH KQPVEPLPGF ENSP00000281543/1-669 GVLNPNEQPT HKLYAGQVGY LIAGMKDVTE AQIGDTLCLH KQPVEPLPGF ENSBTAP00000000356/1-669 GVLNPNEQPT HKLYAGQVGY LIAGMKDVTE AQIGDTLYLH KQPVEPLPGF bmy_11627T0/1-669 GVLNPNEQPT HKLYAGQVGY LIAGMKDVTE AQIGDTLYLH KQPVEPLPGF BACU008733/1-560 GVLNPNEQPT HKLYAGQVGY LIAGMKDVTE AQIGDTLYLH KQPVEPLPGF 351 400 ENSTTRP00000015182/1-669 KSAKPMVFAG MYPIDQSEYN NLKSAIEKLT LNDSSVTVHR DSSLALGAGW ENSP00000281543/1-669 KSAKPMVFAG MYPLDQSEYN NLKSAIEKLT LNDSSVTVHR DSSLALGAGW ENSBTAP00000000356/1-669 KSAKPMVFAG MYPVDQSEYN NLKSAIEKLT LNDSSVVVHR DSSLALGAGW bmy_11627T0/1-669 KSAKPMVFAG MYPIDQSEYN NLKSAIEKLT LNDSSVTVHR DSSLALGAGW BACU008733/1-560 KSAKPMVFAG MYPIDQSEYN NLKSAIEKLT LNDSSVTVHR DSSLALGAGW 401 450 ENSTTRP00000015182/1-669 RLGFLGLLHM EVFNQRLEQE YNASVILTTP TVPYKAVLSS AKLIKEYREK ENSP00000281543/1-669 RLGFLGLLHM EVFNQRLEQE YNASVILTTP TVPYKAVLSS SKLIKEHREK ENSBTAP00000000356/1-669 RLGFLGLLHM EVFNQRLEQE YNASVILTTP TVPYKAVLSS AKLIKEYREK bmy_11627T0/1-669 RLGFLGLLHM EVFNQRLEQE YNASVILTTP TVPYKAVLSS AKLIKEYREK BACU008733/1-560 RLGFLGLLHM EVFNQRLEQE YNASVILTTP TVPYKAVLSS AKLIKEYREK 451 500 ENSTTRP00000015182/1-669 EITIINPAQF PDKSKVTEYL EPIVLGTIIT PDEYIGKIMM LCQARRAVQK ENSP00000281543/1-669 EITIINPAQF PDKSKVTEYL EPVVLGTIIT PDEYTGKIMM LCEARRAVQK ENSBTAP00000000356/1-669 EITIINPAQF PDKSKVTEYL EPVVLGTIIT PDEYTGKIMM LCQARRAVQK bmy_11627T0/1-669 EITIINPAQF PDKSKVTEYL EPIVLGTIIT PDEYTGKIMM LCQARRAVQK BACU008733/1-560 EITIINPAQF PDKSKVTEYL EPIVLGTIIT PDEYTGKIMM LCQARRAVQK 501 550 ENSTTRP00000015182/1-669 NMMYIDQNRI MLKYLFPLNE IVVDFYDSLK SLSSGYASFD YEDAGYQTAE ENSP00000281543/1-669 NMIFIDQNRV MLKYLFPLNE IVVDFYDSLK SLSSGYASFD YEDAGYQTAE ENSBTAP00000000356/1-669 NMMYIDQNRV MLKYLFPLNE IVVDFYDSLK SLSSGYASFD YEDAGYQTAE bmy_11627T0/1-669 NMMYIDQNRI MLKYLFPLNE IVVDFYDSLK SLSSGYASFD YEDAGYQTAE BACU008733/1-560 NMMYIDQNRI MLKYLFPLNE IVVDFYDSLK SLSSGYASFD YEDAGYQTAE 551 600 ENSTTRP00000015182/1-669 LVKMDILLNG NIVEELVTVV HKDKAYSAGK AICERLKDSL PRQLFEIAIQ ENSP00000281543/1-669 LVKMDILLNG NTVEELVTVV HKDKAHSIGK AICERLKDSL PRQLFEIAIQ ENSBTAP00000000356/1-669 LVKMDILLNG SIVEELVTVV HKDKAYSVGK AICERLKDSL PRQLFEIAIQ bmy_11627T0/1-669 LVKMDILLNG NIVEELVTVV HKDKAYSAGK AICERLKDSL PRQLFEIAIQ BACU008733/1-560 LVKMDILLNG NIVEELVTVV HKDKAYSAGK AICERLKDSL PRQLFEIAIQ 601 650 ENSTTRP00000015182/1-669 AALGSKIIAR ETVKAYRKNV LAKCYGGDIT RKMKLLKRQA EGKKKLRKVG ENSP00000281543/1-669 AAIGSKIIAR ETVKAYRKNV LAKCYGGDIT RKMKLLKRQA EGKKKLRKIG ENSBTAP00000000356/1-669 AALGSKIIAR ETVKAYRKNV LAKCYGGDIT RKMKLLKRQA EGKKKLRKVG bmy_11627T0/1-669 AALGSKIIAR ETVKAYRKNV LAKCYGGDIT RKMKLLKRQT EGKKKLRKVG BACU008733/1-560 AALGSKIIAR ETFAI----- ---------- ---------- ---------- 651 700 ENSTTRP00000015182/1-669 NVEVPKDAFV KVLKTQSDK ENSP00000281543/1-669 NVEVPKDAFI KVLKTQSSK ENSBTAP00000000356/1-669 NVEVPKDAFI KVLKTQSDK bmy_11627T0/1-669 NVEVPKDAFI KVLKTQSDK BACU008733/1-560 ---------- ---------