KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:09 2014 Check: 00 .. Name: ENSP00000349874/1-352 Len: 354 Check: 7712 Weight: 1.00 Name: ENSBTAP00000000407/1-352 Len: 354 Check: 9684 Weight: 1.00 Name: ENSTTRP00000000767/1-353 Len: 354 Check: 8554 Weight: 1.00 Name: bmy_08664T0/1-343 Len: 354 Check: 3175 Weight: 1.00 Name: BACU001909/1-352 Len: 354 Check: 7300 Weight: 1.00 // 1 50 ENSP00000349874/1-352 MSLYCGIACR RKFFWCYRLL STYVTKTRYL FELKEDDDAC KKAQQTGAFY ENSBTAP00000000407/1-352 MSLYCGTACR RKIFWCYRLL STYVTKTRYL CELKEDDDAC KKAQQTGAFY ENSTTRP00000000767/1-353 MSLYCGITRR RKSFWCYRLL STYVTKTRYL SELKEDDDAC KKAQQTGAFY bmy_08664T0/1-343 MSLYCGITRR RKSFWCCRLL STYVTKTRYL SELKEDDDAC KKAQQTGAFY BACU001909/1-352 MSLYCGITRR RKSFWCCRLL STYVTKTRYL SELKEDDDAC KKAQQTGAFY 51 100 ENSP00000349874/1-352 LFHSLAPLLQ TSAHQYLAPR HSLLELERLL GKFGQDAQRI EDSVLIGCSE ENSBTAP00000000407/1-352 LFHNLAPLLQ KSEHQYLAPQ HSLLELERLL SKFGQDSQIL EDSVLIGCSE ENSTTRP00000000767/1-353 RFHNLAPLVQ KSEHQYLAPQ HSLLELERLL GKFGQDMQTT EYSMLTGCSE bmy_08664T0/1-343 LFHNLAPLLQ KSEHQYLAPQ HSLLELERLL GKFGQDMQTI EDSVLIGCSE BACU001909/1-352 LFHNLAPLLQ KSEHQYLAPQ HSLLELERLL GKFGQDMQTI EDSVLIGCSE 101 150 ENSP00000349874/1-352 QQEAWFALDL GLDSSFSISA SLHKPEMETE LKGSFIELRK ALFQLNARDA ENSBTAP00000000407/1-352 EQEAWFALDL GLNSSSSINA SLQKAEIETA LQGSFIKLTK ALFELNVKDA ENSTTRP00000000767/1-353 QQAALFALDL GLNSSSSINA SLQKTEMETE LKGSFTGLRK ALFQLNVKDA bmy_08664T0/1-343 QQEAWFALDL ---------A SLQKPEMQTE LKGSFIGLRK ALFQLNVKDA BACU001909/1-352 QQEAWFALDL GLNSSSSINA SLQKPEMETE LKGSFIGLRK ALFQLNVKDA 151 200 ENSP00000349874/1-352 SLLSTAQALL RWHDAHQFCS RSGQPTKKNV AGSKRVCPSN NIIYYPQMAP ENSBTAP00000000407/1-352 SLLSTAQALL RWHDAHQFCS RSGQPTKKNV SGSKRVCPSN NIIYYPQVAP ENSTTRP00000000767/1-353 SLLSMAQALL HWHDAHQFCS RSGQPTKKNV AGSKRVCPSN KIIYYPQMTP bmy_08664T0/1-343 SLLSTAQALL RWHDAHQFCS RSGQPTKKNV AGSKRVCPSN KIIYYPQMTP BACU001909/1-352 SLLSTAQALL RWHDAHQFCS RSGQPTKKNV AGSKRVCPSN KIIYYPQMTP 201 250 ENSP00000349874/1-352 VAITLVSDGT RCLLARQSSF PKGMYSALAG FCDIGESVEE TIRREVAEEV ENSBTAP00000000407/1-352 VVITLVSDGT RCLLVRQSSF PKGMYSALAG FCDIGESLEE TVRREIAEEV ENSTTRP00000000767/1-353 VVITLVSDGT Q-LLARQSSF PKGMYSALAG FCDIGESLEE AIWREAAGEV bmy_08664T0/1-343 VVITLVSDGT RCLLVRQSSF PKGMYSALAG FCDIGESLEE AVRREVAEEV BACU001909/1-352 VVITLVSDGT RCLLARQSSF PKGMYSALAG FCDIGESLEE AVRREVAEEV 251 300 ENSP00000349874/1-352 GLEVESLQYY ASQHWPFPSG SLMIACHATV KPGQTEIQVN LRELETAAWF ENSBTAP00000000407/1-352 GLEVDRLHYS ASQHWPFPNS TLMIACHATV KPGQTELQVN LRELEAAAWF ENSTTRP00000000767/1-353 GLEVERLQYS ASQHWPFPNG ALMIACHATV KPGQTEIQVN LRELEAAAWF bmy_08664T0/1-343 GLEVERLQYS ASQHWPFPNG ALMIACHATV KPGQTEIQVN LRELEAAAWF BACU001909/1-352 GLEVERLQYS ASQHWPFPNG ALMIACHATV KPGQTEIQMN LRELEAAAWF 301 350 ENSP00000349874/1-352 SHDEVATALK RKGPYTQQQN GTFPFWL--P PKLAISHQLI KEWVEKQTCS ENSBTAP00000000407/1-352 SRDEVATVLR RNNPSNQQQS GAVPFWL--P PKLAIAHQLI KEWVEKPTCS ENSTTRP00000000767/1-353 SHDEVATALR KDNPYYQQQN GAFPFWLPPP PKLAFTHQLI KEWVEKPTCS bmy_08664T0/1-343 SHDEVATALR KDNPSYQQQN GAFPFWL--P PKLAIAHQLI KEWVEKPSCS BACU001909/1-352 SHDEVATALR KDNPSYQQQN GAFPFWL--P PKLAIAHQLI KEWVEKPTCS 351 400 ENSP00000349874/1-352 SLPA ENSBTAP00000000407/1-352 PLPA ENSTTRP00000000767/1-353 ILPA bmy_08664T0/1-343 ILPA BACU001909/1-352 ILPA