KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:11 2014 Check: 00 .. Name: ENSTTRP00000000979/1-672 Len: 872 Check: 6963 Weight: 1.00 Name: ENSP00000241014/1-711 Len: 872 Check: 146 Weight: 1.00 Name: ENSBTAP00000000419/1-710 Len: 872 Check: 9505 Weight: 1.00 Name: BACU008939/1-587 Len: 872 Check: 6436 Weight: 1.00 Name: bmy_04098T0/1-738 Len: 872 Check: 1274 Weight: 1.00 // 1 50 ENSTTRP00000000979/1-672 ---------- ---------- ---------- ----LTHDIS LEEFEDEDLS ENSP00000241014/1-711 MAERESGGLG GGAASPPAAS PFLGLHIASP PNFRLTHDIS LEEFEDEDLS ENSBTAP00000000419/1-710 MAERESGGLG GGAASPPAAS PFLGLHIASP PNFRLTHDIS LEEFEDEDLS BACU008939/1-587 ---------- ---------- ---------- ---------- ---------- bmy_04098T0/1-738 ---------- MQLVLKMDSS PDNDSWLEDQ WERWLTHDIS LEEFEDEDLS 51 100 ENSTTRP00000000979/1-672 EITDECGISL QCKDTLSLRP PRAGLLSGG- ------SGGG GSRLQAEMLQ ENSP00000241014/1-711 EITDECGISL QCKDTLSLRP PRAGLLSAG- ------GGGA GSRLQAEMLQ ENSBTAP00000000419/1-710 EITDECGISL QCKDTLSLRP PRAGLLSAGG ------GGGG GSRLQAEMLQ BACU008939/1-587 ---------- ---------- ---------- ---------- ---------- bmy_04098T0/1-738 EITDECGISL QCKDTLSLRP PRAGLLSGGS GGCGGCGGDG GSRLQAEMLQ 101 150 ENSTTRP00000000979/1-672 MDLIDAAGDT PGAEDDEEED EEERAARRPV AGPPEAEPHQ ETAPR----G ENSP00000241014/1-711 MDLIDATGDT PGAEDDEEDD DEERAARRPG AGPPKAESGQ EPASRGQGQS ENSBTAP00000000419/1-710 MDLIDAAGDT PGAEDDEE-- EEERAARRPG AGPPEAEPRQ ETAPRGQSQG BACU008939/1-587 ---------- ---------- ---------- ---------- ---------- bmy_04098T0/1-738 MDLIDAAGDT PGAEDDEEED EEERAARRPG ADPPEAEPRQ ETAPR----G 151 200 ENSTTRP00000000979/1-672 QGQGQGPGGG DTYRPKRPTT LNLFPQVPRS QDTLNNNSLG KKHSWQDRVS ENSP00000241014/1-711 QGQSQGPGSG DTYRPKRPTT LNLFPQVPRS QDTLNNNSLG KKHSWQDRVS ENSBTAP00000000419/1-710 QGQGPGPGSG DTYRPKRPTT LNLFPQVPRS QDTLNNNSLG KKHSWQDRVS BACU008939/1-587 ---------- ---------- ---------- ---------- ---------- bmy_04098T0/1-738 QGQGQGPGGG DTYRPKRPTT LNLFPQVPRS QDTLNNNSLG KKHSWQDRVS 201 250 ENSTTRP00000000979/1-672 RSSSPLKTGE QTPPHEHICL SDELPPPSSP APTKDRGTST DSPCRRSAAT ENSP00000241014/1-711 RSSSPLKTGE QTPPHEHICL SDELPPQSGP APTTDRGTST DSPCRRSTAT ENSBTAP00000000419/1-710 RSSSPLKTGE QTPPHEHICL SDELPPPSSP APTKDRGTST DSPCRRSAAT BACU008939/1-587 ---------- ---------- ---------- ---------- ---------- bmy_04098T0/1-738 RSSSPLKTGE QTPPHEHICL SDELPPPGSP APTKDRGTST DSPCRRSAAT 251 300 ENSTTRP00000000979/1-672 QMAPPGGPPA APPAGRGHSH RDRIHYQADV RLEATEEIYL TPVQRPPDPA ENSP00000241014/1-711 QMAPPGGPPA APPGGRGHSH RDRIHYQADV RLEATEEIYL TPVQRPPDAA ENSBTAP00000000419/1-710 QMAPPGGPPA APAGGRSHSH RDRIHYQTDV RLEATEEIYL TPVQRPPDPA BACU008939/1-587 -MAPPGGPPA APPAGRGHSH RDRIHYQADV RLEATEEIYL TPVQRPPDPA bmy_04098T0/1-738 QMAPPGGPPA APPAGRGHSH RDRIHYQADV RLEATEEIYL TPVQRPPDPA 301 350 ENSTTRP00000000979/1-672 EPNSAFLPPA ESRMSVSSDP DPAAYPATAG RPHPSISEED EGFDCLSSPE ENSP00000241014/1-711 EPTSAFLPPT ESRMSVSSDP DPAAYPSTAG RPHPSISEEE EGFDCLSSPE ENSBTAP00000000419/1-710 EPTSAFLPPA ESRMSVSSDP DPAAYPASTG RPHPSISEED EGFDCLSSPE BACU008939/1-587 EPNSAFLPPA ESRMSVSSDP DPATYPATAG RPHPSISEED EGFDCLSSPE bmy_04098T0/1-738 EPNSAFLPPA ESRMSVSSDP DPATYPATAG RPHPSISEED EGFDCLSPPD 351 400 ENSTTRP00000000979/1-672 RAELPGGGWR GSLGEPPPPP RASLSSDTSA LSYDSVKYTL VVDEHAQLEL ENSP00000241014/1-711 RAEPPGGGWR GSLGEPPPPP RASLSSDTSA LSYDSVKYTL VVDEHAQLEL ENSBTAP00000000419/1-710 RAEPPAGGWR GSLGEPPPPP RASLSSDTSA LSYDSVKYTL VVDEHAQLEL BACU008939/1-587 RAEPPGGGWR GSLGEPPPPP RASLSSDTSA LSYDSVKYTL VVDEHAQLEL bmy_04098T0/1-738 RAELPGGGWR GSLGEPPPPP RASLSSDTSA LSYDSVKYTL VVDEHAQLEL 401 450 ENSTTRP00000000979/1-672 VSLRPCFGDY SDESDSATVY DNCASASSPY ESAIGEEYEE APRPRPPACL ENSP00000241014/1-711 VSLRPCFGDY SDESDSATVY DNCASVSSPY ESAIGEEYEE APRPQPPACL ENSBTAP00000000419/1-710 VSLRPCFGDY SDESDSATVY DNCASASSPY ESAIGEEYEE APRPRPPTCL BACU008939/1-587 VSLRPCFGDY SDESDSATVY DNCASASSPY ESAIGEEYEE APRPRPPACL bmy_04098T0/1-738 VSLRPCFGDY SDESDSATVY DNCASASSPY ESAIGEEYEE APRPRPPACL 451 500 ENSTTRP00000000979/1-672 SEDSTPDEPD VHFSKKFLNV FMSGRSRSSS AESFGLFSCV INGEEQEQSH ENSP00000241014/1-711 SEDSTPDEPD VHFSKKFLNV FMSGRSRSSS AESFGLFSCI INGEEQEQTH ENSBTAP00000000419/1-710 SEDSTPDEPD VHFSKKFLNV FMSGRSRSSS AESFGLFSCV INGEEQEQTH BACU008939/1-587 SEDSTPDEPD VHFSKKFLNV FMSGRSRSSS AESFGLFSCV INGEEQEQTH bmy_04098T0/1-738 SEDSTPDEPD VHFSKKFLNV FMSGRSRSSS AESFGLFSCV INGEEQEQTH 501 550 ENSTTRP00000000979/1-672 RAVFRFVPRH EDELELEVDD PLLVEL-AED YWYEAYNMRT XXXXXXXXXX ENSP00000241014/1-711 RAIFRFVPRH EDELELEVDD PLLVELQAED YWYEAYNMRT GARGVFPAYY ENSBTAP00000000419/1-710 RAIFRFVPRH EDELELEVDD PLLVELQAED YWYEAYNMRT GARGIFPAYY BACU008939/1-587 RAIFRFVPRH EDELELEVDD PLLVELQAED YWYEAYNMRT GARGIFPAYY bmy_04098T0/1-738 RAIFRFVPRH EDELELEVDD PLLVELQAED YWYEAYNMRT GARGIFPAYY 551 600 ENSTTRP00000000979/1-672 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXX- ENSP00000241014/1-711 AIEVTKEPEH MAALAKNSDW VDQFRVKFLG SVQVPYHKGN DVLCAAMQK- ENSBTAP00000000419/1-710 AIEVTKEPEH MAALTKNSDW VDQFRVKFLG SVQVPYHKGN DVLCAAMQK- BACU008939/1-587 AIEVTKEPEH MAALTKNSDW VDQFRVKFLG SVQVPYHKGN DVLCAAMQK- bmy_04098T0/1-738 AIEVTKEPEH MAALTKNSDW VDQFRVKFLG SVQVPYHKGN DVLCAAMQKV 601 650 ENSTTRP00000000979/1-672 ---------- ---------- ---------- ---IATTRRL TVHFNPPSSC ENSP00000241014/1-711 ---------- ---------- ---------- ---IATTRRL TVHFNPPSSC ENSBTAP00000000419/1-710 ---------- ---------- ---------- ---IATTRRL TVHFNPPSSC BACU008939/1-587 ---------- ---------- ---------- ---IATTRRL TVHFNPPSSC bmy_04098T0/1-738 PAPLGRVPTP GPVPILSWGE GHPAPDVPIP HPQIATTRRL TVHFNPPSSC 651 700 ENSTTRP00000000979/1-672 VLEISVRGVK IGVKADDSQE AKGNKCSHFF QLKNISFCGY HPKNNKYFGF ENSP00000241014/1-711 VLEISVRGVK IGVKADDSQE AKGNKCSHFF QLKNISFCGY HPKNNKYFGF ENSBTAP00000000419/1-710 VLEISVRGVK IGVKADDSQE AKGNKCSHFF QLKNISFCGY HPKNNKYFGF BACU008939/1-587 VLEISMRGVK IGVKADDSQE AKGNKCSHFF QLKNISFCGY HPKNNKYFGF bmy_04098T0/1-738 VLEISVRGVK IGVKADDSQE AKGNKCSHFF QLKNISFCGY HPKNNKYFGF 701 750 ENSTTRP00000000979/1-672 ITKHPADHRF ACHVFVSEES TKALAESVG- ---------- ---------- ENSP00000241014/1-711 ITKHPADHRF ACHVFVSEDS TKALAESVG- ---------- ---------- ENSBTAP00000000419/1-710 ITKHPADHRF ACHVFVSEES TKALAESVG- ---------- ---------- BACU008939/1-587 ITKHPADHRF ACHVFVSEES TKALAESVGY VCVSCQAPSP VASPGLRPRA bmy_04098T0/1-738 ITKHPADHRF ACHVFVSEES TKALAESVG- ---------- ---------- 751 800 ENSTTRP00000000979/1-672 ---------- ---------- ---------- ---------- ---------- ENSP00000241014/1-711 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000419/1-710 ---------- ---------- ---------- ---------- ---------- BACU008939/1-587 HSSCSAASLS PPRRSAQRPW ATVAWREGWV VLRSKLLSCW ALSSAEISLR bmy_04098T0/1-738 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000000979/1-672 ---------- ---------- ---------- ---------- ---------R ENSP00000241014/1-711 ---------- ---------- ---------- ---------- ---------R ENSBTAP00000000419/1-710 ---------- ---------- ---------- ---------- ---------R BACU008939/1-587 KHCVQRTEPS SSGWGRRGPI RVPRGSCVKT LGRDPVPPQS FWCVCLPPRR bmy_04098T0/1-738 ---------- ---------- ---------- ---------- ---------R 851 900 ENSTTRP00000000979/1-672 AFQQFYKQFV EYTCPTEDIY LE ENSP00000241014/1-711 AFQQFYKQFV EYTCPTEDIY LE ENSBTAP00000000419/1-710 AFQQFYKQFV EYTCPTEDIY LE BACU008939/1-587 AFQQFYKQFV EYTCPTEDIY LE bmy_04098T0/1-738 AFQQFYKQFV EYTCPTEDIY LE