KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:11:13 2014 Check: 00 .. Name: ENSTTRP00000007900/1-549 Len: 559 Check: 1730 Weight: 1.00 Name: ENSP00000222329/1-548 Len: 559 Check: 6383 Weight: 1.00 Name: bmy_17408T0/1-543 Len: 559 Check: 424 Weight: 1.00 Name: ENSBTAP00000000437/1-552 Len: 559 Check: 5761 Weight: 1.00 // 1 50 ENSTTRP00000007900/1-549 MKTPADTGFA FPDWAYKPES SPGSRQIQLW HFILELLRKE EYQGVIAWQG ENSP00000222329/1-548 MKTPADTGFA FPDWAYKPES SPGSRQIQLW HFILELLRKE EYQGVIAWQG bmy_17408T0/1-543 MKTPADTGFA FPDWAYKPES SPGSRQIQLW HFILELLRKE EYQGVIAWQG ENSBTAP00000000437/1-552 MKTPADTGFA FPDWAYKPES SPGSRQIQLW HFILELLRKE EYQGVIAWQG 51 100 ENSTTRP00000007900/1-549 DYGEFVIKDP DEVARLWGVR KCKPQMNYDK LSRALRYYYN KRILHKTKGK ENSP00000222329/1-548 DYGEFVIKDP DEVARLWGVR KCKPQMNYDK LSRALRYYYN KRILHKTKGK bmy_17408T0/1-543 DYGEFVIKDP DEVARLWGVR N--------- ------YYYN KRILHKTKGK ENSBTAP00000000437/1-552 DYGEFVIKDP DEVARLWGVR KCKPQMNYDK LSRALRYYYN KRILHKTKGK 101 150 ENSTTRP00000007900/1-549 RFTYKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000222329/1-548 RFTYKFNFNK LVLVNYPFID VGLAGGAVPQ SAPPVPSGGS HFRFPPSTPS bmy_17408T0/1-543 RFTYKFNFNK LVLVNYPFID VGLAGGAVPQ SAPPVPTGGS HFRFPPSTPS ENSBTAP00000000437/1-552 RFTYKFNFNK LVLVNYPFID VGLAGGAVPQ SAPPVPTGGS HFRFPPSTPS 151 200 ENSTTRP00000007900/1-549 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000222329/1-548 EVLSPTEDPR SPPACSSSSS SLFSAVVARR LGRGSVSD-C SDGTSELEEP bmy_17408T0/1-543 EVLSPTEDPR SPPACSSSSS SLFSAVVARR LGRGSVSD-C SDGTSELEEP ENSBTAP00000000437/1-552 EVLSPTEDPR SPPACSSSSS SLFSAVVARR LGRGSVSD-C SDGTSELEEP 201 250 ENSTTRP00000007900/1-549 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX SVFRVYPRPR GGPEPLSPFP ENSP00000222329/1-548 LGEDPRARPP GPPDLGAFRG PPLARLPHDP GVFRVYPRPR GGPEPLSPFP bmy_17408T0/1-543 LGEDPRARPP GPPELGAFRG PPLARLPHDP GVFRVYPRPR GGPEPLSPFP ENSBTAP00000000437/1-552 LGEDPRARPP GPPELGAFRG PPLARLPHDP GVFRVYPRPR GGPEPLSPFP 251 300 ENSTTRP00000007900/1-549 VSPLAGPGSL LPPQLSPALP MTPTHLAYTP SPTLSPMYPS GGGGPSGSGG ENSP00000222329/1-548 VSPLAGPGSL LPPQLSPALP MTPTHLAYTP SPTLSPMYPS GGGGPSGSGG bmy_17408T0/1-543 VSPLAGPGSL LPPQLSPALP MTPTHLAYTP SPTLSPMYPS GGGGPSGSGG ENSBTAP00000000437/1-552 VSPLAGPGSL LPPQLSPALP MTPTHLAYTP SPTLSPMYPG GGGGPSGSGG 301 350 ENSTTRP00000007900/1-549 GSHFSFSPED MKRYLQAHTQ SVYNYHLSPR AFLHYPGLVV PQPQRADKCP ENSP00000222329/1-548 GSHFSFSPED MKRYLQAHTQ SVYNYHLSPR AFLHYPGLVV PQPQRPDKCP bmy_17408T0/1-543 GSHFSFSPED MKRYLQAHTQ SVYNYHLSPR AFLHYPGLVV PQPQRADKCP ENSBTAP00000000437/1-552 GSHFSFSPED MKRYLQAHTQ SVYNYHLSPR AFLHYPGLVV PQPQRPDKCP 351 400 ENSTTRP00000007900/1-549 LPPMAPETPP VPSSASSSSS SSSSPFKFKL QPPPLGRRQR AAGDKALVGA ENSP00000222329/1-548 LPPMAPETPP VPSSASSSSS SSSSPFKFKL QPPPLGRRQR AAGEKAVAGA bmy_17408T0/1-543 LPPMAPETPP VPSSASSSSS SSSSPFKFKL QPPPLGRRQR AAGEKALVGA ENSBTAP00000000437/1-552 LPPMAPETPP VPSSA--SSS SSSSPFKFKL QPPPLGRRQR AAGEKALAGA 401 450 ENSTTRP00000007900/1-549 DK-------G GGSAGGLAEG AGTPAP---P PPPPQIKVEP ISEGESEEVE ENSP00000222329/1-548 DK-------S GGSAGGLAEG AGALAP---P PPPPQIKVEP ISEGESEEVE bmy_17408T0/1-543 DKGSGGALGG GGSTGGLAEG AGALAPPAPP PPPPQIKVEP ISEGESEEVE ENSBTAP00000000437/1-552 DKGSGLALSG ---AGGLAEG AGALAPP-PP PPPPQIKVEP ISEGESEEVE 451 500 ENSTTRP00000007900/1-549 VTDISDEDEE DGEVFKTPRA PPAPPKPDPG EAPGAAQCMP LKLRFKRRWS ENSP00000222329/1-548 VTDISDEDEE DGEVFKTPRA PPAPPKPEPG EAPGASQCMP LKLRFKRRWS bmy_17408T0/1-543 VTDISDEDEE DGEVFKTPRA PPAPPKPDPG EAPGAAQCMP LKLRFKRRWS ENSBTAP00000000437/1-552 VTDISDEDEE DGEVFKTPRV PPAPPKPDPG EAPGVAQCMP LKLRFKRRWS 501 550 ENSTTRP00000007900/1-549 EDCRLEGGGG PAGGLEDEGE DKKVRGEGPG EAGGPLTPRR VSSDLQHATA ENSP00000222329/1-548 EDCRLEGGGG PAGGFEDEGE DKKVRGEGPG EAGGPLTPRR VSSDLQHATA bmy_17408T0/1-543 EDCRLEGGGG PTGGLEDEGE DKKVRGEGPG EAGGPLTPRR VSSDLQHATA ENSBTAP00000000437/1-552 EDCRLEGGGG PAGGLEDEGE DKKVRGEGPG EAGGPLTPRR VSSDLQHATA 551 600 ENSTTRP00000007900/1-549 QLSLEHRDS ENSP00000222329/1-548 QLSLEHRDS bmy_17408T0/1-543 QLSLEHRDS ENSBTAP00000000437/1-552 QLSLEHRDS