KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:15 2014 Check: 00 .. Name: ENSP00000269053/1-215 Len: 215 Check: 4139 Weight: 1.00 Name: BACU013939/1-170 Len: 215 Check: 5331 Weight: 1.00 Name: ENSTTRP00000010623/1-209 Len: 215 Check: 5273 Weight: 1.00 Name: bmy_21063T0/1-148 Len: 215 Check: 9267 Weight: 1.00 Name: ENSBTAP00000000449/1-100 Len: 215 Check: 812 Weight: 1.00 // 1 50 ENSP00000269053/1-215 MVSALRGAPL IRVHSSPVSS PSVSGPRRLV SCLSSQSSAL SQSGGGSTSA BACU013939/1-170 ---------- ---------- ---------V SCLSSQSPAL SQGGGVSNPA ENSTTRP00000010623/1-209 AVSALCGRHL IHSGPVSLLL PGAPS----V SCLS--SPAW SQGDGVSNPA bmy_21063T0/1-148 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000000449/1-100 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000269053/1-215 AGIEARSRAL RRRWCPAGIM LLALVCLLSC LLPSSEAKLY GRCELARVLH BACU013939/1-170 SRMEGGSWAP RRWSCLPGIT LLALASLLSC LLTSGQAKVY SRCELARVLQ ENSTTRP00000010623/1-209 ARMEGGSWAP RRWPCLPGMT SLALASLLSC LLTSGQAEVY SRCELARMLQ bmy_21063T0/1-148 RGVEGKPNRA ---------- --------SC LLTSGQAKVY SRCELARVLQ ENSBTAP00000000449/1-100 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000269053/1-215 DFGLDGYRGY SLADWVCLAY FTSGFNAAAL DYEADGSTNN GIFQINSRRW BACU013939/1-170 DFGLDGFRGY SLADWVCLAY FASGFNTAAV DHEADGSTNN GIFQINSRKW ENSTTRP00000010623/1-209 DFGLDGFRGY SLADWVCLAY FASGFNTAAV DHEADGSTNN GIFQINSRKW bmy_21063T0/1-148 DIGLDGFRGY SLADWVCLAY FASGFNTAAV DHEADGSTNN GIFQINSRKW ENSBTAP00000000449/1-100 ---------- -----ICLAY FASGFNTGAV DHEADGSTNS GIFQINSRKW 151 200 ENSP00000269053/1-215 CSNLTPNVPN VCRMYCSDLL NPNLKDTVIC AMKITQEPQG LGYWEAWRHH BACU013939/1-170 CKNLKPNVPN MCQMYCSDLL NPNLKDTVIC AMKITQDPQG LGTWGFFAS- ENSTTRP00000010623/1-209 CKNLNPKVPN MCQMYCSDLL NPNLKDTVIC AMKIVQDPQG LGTWEVWRHH bmy_21063T0/1-148 CKNLNPNVPN MCQMYCSDLL NPNLKDTVIC AMKIIQDPQG LGTWEVWRHH ENSBTAP00000000449/1-100 CKNLNPNVPN LCQMYCSDLL NPNLKDTVIC AMKITQEPQG LGSWEAWRHH 201 250 ENSP00000269053/1-215 CQGKDLTEWV DGCDF BACU013939/1-170 ---------- ----- ENSTTRP00000010623/1-209 CQGEDLSDWV DGCEL bmy_21063T0/1-148 CQGKDLSDWV DGCEL ENSBTAP00000000449/1-100 CQGKDLSDWV DGCEL