KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:11:15 2014  Check: 00 ..

 Name: bmy_12080T0/1-193         Len:    238  Check:  8703  Weight:  1.00
 Name: ENSTTRP00000004520/1-227  Len:    238  Check:  2459  Weight:  1.00
 Name: ENSP00000385300/1-228     Len:    238  Check:  4599  Weight:  1.00
 Name: BACU012054/1-235          Len:    238  Check:  6799  Weight:  1.00
 Name: ENSBTAP00000000450/1-235  Len:    238  Check:  3046  Weight:  1.00

//


                          1                                                   50
bmy_12080T0/1-193         MSVAVEIFGF FMAALGLLML GVTLTHSNWR VSTVHGNVIT TSTIFENLWY 
ENSTTRP00000004520/1-227  MSVAVEIFGF FIAALGLLML GVTLTHSSWR VSTVHGNVIT TSTIFENLWY 
ENSP00000385300/1-228     MSMAVETFGF FMATVGLLML GVTLPNSYWR VSTVHGNVIT TNTIFENLWF 
BACU012054/1-235          MSVAVEIFGF FMAALGLLML GVTLTHSSWR VSTVHGNVIT TSTIFENLWY 
ENSBTAP00000000450/1-235  MLVAVEIFGF FLTAVGLLML GVTLAHSSWR VSTVHGNVIT TNTIFENLWY 


                          51                                                 100
bmy_12080T0/1-193         SCATDSLGVY NCWEFPSMLA LSGYIQACRA LMITAILLGF LGLFLGMVGL 
ENSTTRP00000004520/1-227  SCATDSLGVY NCWEFPSMLA LSGYIQACRA LMITAIFLGF LGLFLGMVGL 
ENSP00000385300/1-228     SCATDSLGVY NCWEFPSMLA LSGYIQACRA LMITAILLGF LGLLLGIAGL 
BACU012054/1-235          SCATDSLGVY NCWEFPSMLA LSGYIQACRA LMITAILLGF LGLFLGMVGL 
ENSBTAP00000000450/1-235  SCATDSMGVH NCWEFPSMLA LSGYIQACRA LMITAILLGF LGLFLGMVGL 


                          101                                                150
bmy_12080T0/1-193         RCTNIGGLEP SRKTKLAATA GALHILAGNW GKVM------ ---------- 
ENSTTRP00000004520/1-227  RCTNIGDLEP SRKTKLAATA GALNILAXXX XXXXXXXXXX XXXXXXXXXX 
ENSP00000385300/1-228     RCTNIGGLEL SRKAKLAATA GALHILAGIC GMVAISWYAF NITRDFFDPL 
BACU012054/1-235          RCTNIGGLER YRKTKLAATA GALHILAGVC GIVAISWYAF DITQDFFDPL 
ENSBTAP00000000450/1-235  RCTNIGGLEL SRKTKLAATA GALHILAGIC GMVAVSWYAF NITRDFFDPL 


                          151                                                200
bmy_12080T0/1-193         -GGRCAAVG- ---VGWPLAQ TAGLPHLPLC IDTC------ -----PLSLL 
ENSTTRP00000004520/1-227  XXXXXXXXXP PLYLEWSASL LAILGGICLF S--CCGSEQD QGASIRLPYK 
ENSP00000385300/1-228     YPGTKYELGP ALYLGWSASL ISILGGLCLC SACCCGSDED PAASARRPYQ 
BACU012054/1-235          YPGTKYELGP ALYLGWSASL LAILGGICLF SNCCRSRDED HGASIRPPYK 
ENSBTAP00000000450/1-235  YAGTKYELGP ALYLGWSACL LAILGGICLF SNCCCSRDRD PATGVQLPYK 


                          201                                                250
bmy_12080T0/1-193         TPLSPI---- --LTKSL--- ----GYISVH QQCFLSPH 
ENSTTRP00000004520/1-227  APAMPA---- --MPTSASDE EGDSSFGKYG KNAYV--- 
ENSP00000385300/1-228     APVSV----- --MPVATSDQ EGDSSFGKYG RNAYV--- 
BACU012054/1-235          APVMPAKSLA ARLPTSASEE EGDSSFGKYG KNAYV--- 
ENSBTAP00000000450/1-235  APVIPAASLA ARLPAAASDE EGDSSFGKYG KNAYV---