KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:11:24 2014 Check: 00 .. Name: ENSP00000321246/1-318 Len: 318 Check: 8509 Weight: 1.00 Name: ENSBTAP00000000477/1-318 Len: 318 Check: 3661 Weight: 1.00 Name: bmy_13080T0/1-305 Len: 318 Check: 5618 Weight: 1.00 Name: BACU004504/1-208 Len: 318 Check: 5534 Weight: 1.00 // 1 50 ENSP00000321246/1-318 MIQPMASPSN SSTVPVSEFL LICFPNFQSW QHWLSLPLSL LFLLAMGANT ENSBTAP00000000477/1-318 RIYLMTSPSN YSSAPASKFL LICFPNYQSW QHWLALPFSF LFLLAMGANT bmy_13080T0/1-305 ----MASPSN YSTAPVSEFL LICFPNYQSW QHWLSLPLSL LFFLAMGASA BACU004504/1-208 ---------- ---------- ---------- ---------- -----MEASA 51 100 ENSP00000321246/1-318 TLLITIQLEA SLHQPLYYLL SLLSLLDIVL CLTVIPKVLA IFWYDLRSIS ENSBTAP00000000477/1-318 TLLITIWLEA SLHEPMYYLL SLLSLLDMVL CLTVIPKVLA IFWFDLRSIS bmy_13080T0/1-305 TLLITIQLEA SLQEPRYYLF SLLSLLDMVL CLIVIPKVLA IFWFDLRSIS BACU004504/1-208 TLLITTQLEA SLQEPMYYLL SLLSLLDMVL CLIVIPKVLA IFWFDLRSIS 101 150 ENSP00000321246/1-318 FPACFLQMFI MNSFLPMESC TFMVMAYDRY VAICHPLRYP SIITNQFVAK ENSBTAP00000000477/1-318 FSACFLQMFI MNSFLPMESC TFMVMAYDRY VAICHPLRYP SIISDQFVAK bmy_13080T0/1-305 FSACFLQMFI MNSFLAMESC TFMVIAYDCY MAICHPLRYP SIITNHFVAK BACU004504/1-208 FSACFLQMFI MNSFLAMESC TFMVIAYDCY MAICHPLR-- ---------- 151 200 ENSP00000321246/1-318 ASVFIVVRNA LLTAPIPILT SLLHYCGENV IENCICANLS VSRLSCDNFT ENSBTAP00000000477/1-318 ASAFIIARNA LLLSPVPILS ARLRYCGKNV IENCICANLS VSRLSCDNIT bmy_13080T0/1-305 ASVFVVIQNA LLTVPIPILS AQLLYCGKNV IENCLCANLC PALL------ BACU004504/1-208 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000321246/1-318 LNRIYQFVAG WTLLGSDLFL IFLSYTFILR AVLRFKAEGA AVKALSTCGS ENSBTAP00000000477/1-318 VNRIYQSVAG WTLLGSDFIL IFISYIFILR AVFKLKTEGA AVKALSTCGS bmy_13080T0/1-305 ---IYQSVAG WTLLGSDFIL IFITYIFILR AVLKFKAEGA AVKALSTCGS BACU004504/1-208 ---IYQSVAG WTLLGSDFIL IFISYIFILR AVLKFKAEGD AVKALSACGS 251 300 ENSP00000321246/1-318 HFILILFFST ILLVVVLTNV ARKKVPMDIL ILLNVLHHLI PPALNPIVYG ENSBTAP00000000477/1-318 HFILILFFST ILLVVVLTNV ARKRVPMDIL ILLNILHHLI PPALNPIVYG bmy_13080T0/1-305 HFILILFFST ILLVVVLTNV ARKSVPMDIL ILLNVLHHLT SLALNPIVYG BACU004504/1-208 HFVLILFFST ILLVVVLTNV ARKSVPMDIL ILLNVLHHLI SLALNLIVYG 301 350 ENSP00000321246/1-318 VRTKEIKQGI QKLLQRGR ENSBTAP00000000477/1-318 FQTKELKQGF QKLLHRGF bmy_13080T0/1-305 VQTKEVKQGI QKLLQRGM BACU004504/1-208 VQTKEIKQGI QKLLQRGM