KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:25 2014 Check: 00 .. Name: ENSP00000281172/1-822 Len: 948 Check: 5016 Weight: 1.00 Name: ENSTTRP00000014526/1-816 Len: 948 Check: 346 Weight: 1.00 Name: ENSBTAP00000000479/1-837 Len: 948 Check: 7049 Weight: 1.00 Name: bmy_09487T0/1-821 Len: 948 Check: 6620 Weight: 1.00 Name: BACU016964/1-765 Len: 948 Check: 9890 Weight: 1.00 // 1 50 ENSP00000281172/1-822 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014526/1-816 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000479/1-837 ---------- ---------- ---------- ---------- ---------- bmy_09487T0/1-821 MLRASAAAKT RRAERLPAAR RALAGSLPEM YWACAARGRL RRAAFLEGAH BACU016964/1-765 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000281172/1-822 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014526/1-816 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000479/1-837 ---------- --------CI NEYLLEKKN- ---------- ----TSIKIT bmy_09487T0/1-821 KPSSKIFHAS PINSNYVLRV FSYVLEEKYW WGGSKMTIFT YAVMQNIKVT BACU016964/1-765 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000281172/1-822 MNGHISNHPS SFGMYPSQMN GYGSSPTFSQ TDREHGSKTS AKALYEQRKN ENSTTRP00000014526/1-816 MNGHISNHPS GFGIYPSQMN GYGSPPTFS- MDREHSSRTS AKALYEQRKN ENSBTAP00000000479/1-837 MNGHISSHPS GFGMNPSQMN GYGSSATFS- MDRDHSSRTS AKALYEQRKN bmy_09487T0/1-821 MNGHISNHPS GFRMYPSQMN GYGSSPTFS- MDREHSSRTS AKALYEQRKN BACU016964/1-765 MNGHISNHPS GFGMYPSQMN GYGSSPTFS- MDREHSSRTS AKALYEQRKN 151 200 ENSP00000281172/1-822 YARDSVSSVS DISQYRVEHL TTFVLDRKDA MITVDDGIRK LKLLDAKGKV ENSTTRP00000014526/1-816 YARDSVSSVS DISQYHVEHL TTFVLDRKDA MITVDDGIRK LKLLDAKGKV ENSBTAP00000000479/1-837 YARDSVSSVS DISQYRVEHL TTFVLDRKDA MITVDDGIRK LKLLDAKGKV bmy_09487T0/1-821 YARDSVSSVS DTSQYHVEHL TTFVLDRKDA MITVDDGIRK LKLLDAKGKI BACU016964/1-765 YARDSVSSVS DISQYHVEHL TTFVLDRKDA MITVDDGIRK LKLLDAKGKI 201 250 ENSP00000281172/1-822 WTQDMILQVD DRAVSLIDLE SK-------- ---------- ------NELE ENSTTRP00000014526/1-816 WTQDMILQVD ERAVSLIDLE SK-------- ---------- ------NELE ENSBTAP00000000479/1-837 WTQDMILQVD EKAVSLIDLE SK-------- ---------- ------NELE bmy_09487T0/1-821 WTQDMILQVD ERAVSLIDLE SKASWKYLYY FIFKKVHKYL CLQLGQNELE BACU016964/1-765 WTQDMILQVD ERA------- ---------- ---------- -------ELE 251 300 ENSP00000281172/1-822 NFPLNTIQHC QAVMHSCSYD SVLALVCKEP TQNKPDLHLF QCDEVKANLI ENSTTRP00000014526/1-816 NFPLNTIQHC QAVMHSCNYD SVLALVCKES TQNKPDLHLF QCDEIKANLI ENSBTAP00000000479/1-837 NFPLNTIQHC QAVMHSCSYD SILALVCKEP TQSKPDLHLF QCDEIKANLI bmy_09487T0/1-821 NFPLNTIQHC QAVMHLCNYD SILALVCKES TQNKPDLHLF QCDEIKANLI BACU016964/1-765 NFPLNTIQHC QAVMHLCNYD SILALVCKES TQNKPDLHLF QCDEIKANLI 301 350 ENSP00000281172/1-822 SEDIESAISD SKGGKQKRRP DALRMISNAD PSIPPPPRAP APAPPGTVTQ ENSTTRP00000014526/1-816 SEDIESAISD SKGGKQKRRP DVLRMISKAD PGIPPPPRAP APVPPGTVTQ ENSBTAP00000000479/1-837 SEDVESAISD SKGGKQKRRL DVLRMISKAD PGIPPPPKAP APVPPGTVTQ bmy_09487T0/1-821 SEDIESAISD SKGGKQKRRP DVLRMISKAD XGIPPPPRAP APVPPGTVTQ BACU016964/1-765 SEDIESAISD SKGGKQKRRP DVLRMISKAD PGIPPPPRAP APVPPGTVTQ 351 400 ENSP00000281172/1-822 VDVRSRVAAW SAWAADQGDF EKPRQYHEQE ETPEMMAARI DRDVQILNHI ENSTTRP00000014526/1-816 VDVRSRVAAW SALAADQGDF EKQRNYYQQE ETPEVMAARI DRDVQILNHI ENSBTAP00000000479/1-837 VDVRSRVAAW SALAADQADF EKQRNYYQQE ETPEMMAARI DRDVQILNHI bmy_09487T0/1-821 VDVRSRVAAW SALAADQGDF EKQRHYHQQE ETPEMMAARI DRDVQILNHI BACU016964/1-765 VDVRSRVAAW SALAADQGDC E----YSQ-- ---------- --GLQILNHI 401 450 ENSP00000281172/1-822 LDDIEFFITK LQKAAEAFSE LSKRKKNKKG KRKGPGEGVL TLRAKPPPPD ENSTTRP00000014526/1-816 LDDIEFFITK LQKAAEAFSE LSKRKKTKKG KKKGPGXXXX XXXXXXXXXX ENSBTAP00000000479/1-837 LDDIEFFITK LQKAAEAFSE LSKRKKAKKG KKKGPGEGVL TLRAKPPPPD bmy_09487T0/1-821 LDDIEFFITK LQKAAEAFSE LSKRKKAKKG KKKGPGEGVL TLRAKPPPPD BACU016964/1-765 LDDIEFFITK LQKAAEAFSE LSKRKKAKKG KKKGPGEGVL TLRAKPPPPD 451 500 ENSP00000281172/1-822 EFLDCFQKFK HGFNLLAKLK SHIQNPSAAD LVHFLFTPLN MVVQATGGPE ENSTTRP00000014526/1-816 XXXXXXXXXX XXXXXXAKLK SHIQNPSAAD LVHFLFTPLN MVVQATGGPE ENSBTAP00000000479/1-837 AFVDCFQKFK HGFNLLAKLK SHIQNPSAAD LVHFLFTPLN MVVQATGGPE bmy_09487T0/1-821 SFVDCFQKFK HGFNLLAKLK SHIQNPSAAD LVHFLFTPLN MVVQATGGPE BACU016964/1-765 SFVDCFQKFK HGFNLL---- ---------- ---------- -VVQATGGPE 501 550 ENSP00000281172/1-822 LASSVLSPLL NKDTIDFLNY TVNGDERQLW MSLGGTWMKA RAEWPKEQFI ENSTTRP00000014526/1-816 LASSVLSPLL TKDTIDFLSY TVNVDERQLW VSLGDSWMKS RAEWPKEQFI ENSBTAP00000000479/1-837 LAGSVLSPLL TKDTIDFLNY TVSADERQLW MSLGDSWMKT RAEWPKEQFI bmy_09487T0/1-821 LASSVLSPLL TKDTIDFLSY TVNVDERQLW VSLGDSWMKA RAEWPKEQFI BACU016964/1-765 LASSVLSPLL TKDTIDFLSY TVNVDERQLW VSLGDSWMKA RAEWPKEQFI 551 600 ENSP00000281172/1-822 PPYVPRFRNG WEPPMLNFMG ATMEQDLYQL AESVANVAEH QRKQEIKRLS ENSTTRP00000014526/1-816 PPYVPRFRSG WEPPMLNFMG TSVEPDLYQL TESVANAAEQ HRKQETKRLS ENSBTAP00000000479/1-837 PPYVPRFRSG WEPPMLNFMG SSVEPDLYQL NESVANAAEH HRKQETKRLS bmy_09487T0/1-821 PPYVPRFRSG WEPPMLNFMG ASVEPDLYQL TESVANAAEQ HRKQETKRLS BACU016964/1-765 PPYVPRFRSG WEPPMLNFMG ASVEPDLYQL TESVANAAEQ HRKQETKRLS 601 650 ENSP00000281172/1-822 TEHSSVSEYH PADGYAFSSN IYTRGSHLDQ GEAAVAFKPT SNRHID-RNY ENSTTRP00000014526/1-816 TEHSSVSEYP PADGYTVFNN IYGRGPHLDQ GEAAVAFKPT PQRHVD-RNY ENSBTAP00000000479/1-837 TEHSSVSEYP SADGYTAFNN IYGRGPHSDQ GEAAVAFKPT PLRHVDSRNY bmy_09487T0/1-821 TEHSSVSEYP PADGYTVFNN IYGRGPHVDQ GEAAVAFKPT PHRHVD-RNY BACU016964/1-765 TEHSSVSEYP PADGYTVFNN IYGRGPHVDQ GEAAVAFKPT PHRHVD-RNY 651 700 ENSP00000281172/1-822 EPLKTQPKKY AKSKYDFVAR NNSELSVLKD DILEILDDRK QWWKVRNASG ENSTTRP00000014526/1-816 DP---QPKKY AKSRYDFVAR NNSELSVQKD DILEILDDRK QWWKVLNASG ENSBTAP00000000479/1-837 DL---QPKKY AKSKYDFVAR NNSELSVQKD DILEILDDRK QWWKVRNASG bmy_09487T0/1-821 DL---QPKKY AKSRYDFVAR NNSELSVQKD DILEILDDRK QWWKVRNASG BACU016964/1-765 DL---QPKKY AKSRYDFVAR NNSELSVQKD DILEILDDRK QWWKVRNASG 701 750 ENSP00000281172/1-822 DSGFVPNNIL DIVRPPESGL GRADPPYTHT IQKQRMEYGP RPADTPPAPS ENSTTRP00000014526/1-816 DSGFVPNNIL DIVRPPESGL GRADPPYTHT IQKQRMEYGP RATDIPSAPS ENSBTAP00000000479/1-837 DSGFVPNNIL DIVRPPESGL GRADPPYMHT IQKQRMEYGP RATDIPSAPS bmy_09487T0/1-821 DSGFVPNNIL DIVRPPESGL GRADPPYTHT IQKQRMEYGP RATDIPSAPS BACU016964/1-765 DSGFVPNNIL DIVRPPESGL GRADPPYTHT IQKQRMECGP RATDIPSAPS 751 800 ENSP00000281172/1-822 PPPTPAPVPV PLPPSTPAPV PVSKVPANIT RQNSSSSDSG GSIVRDSQRH ENSTTRP00000014526/1-816 PPPTPAPVPV PLPPSASA-- PVSKVPANVT RQNSSSSESG GSVVRDSQRQ ENSBTAP00000000479/1-837 PPPTPAPVPV PLPPSTPAPI PVSKLPANIT RQNSSSSDSG GSIVRDSQRQ bmy_09487T0/1-821 PPPTPAPVPV PLPPSASAPL PVSKVPANVT RQNSSSSDSG GSIVRDSQRQ BACU016964/1-765 PPPTPAPVPV PLPPSASAPL PVSKVPANVT RQNSSSSDSG GSIVRDSQRQ 801 850 ENSP00000281172/1-822 KQLPVDRRKS QMEEVQDELI HRLTIGRSAA QKKFHVPRQN VPVINITYDS ENSTTRP00000014526/1-816 KQVPVDRRKS QMEEVQDELV HRLTIGRSAA QKKFHVPRQN VPVVNITYDS ENSBTAP00000000479/1-837 KQVPVDRRKS QMEEVQDELI HRLTIGRSAA QKKFHVPRQN VPVVNITYDS bmy_09487T0/1-821 KQVPADR--- ---------- ---------- --KFPREAKN IPSF------ BACU016964/1-765 KQVPVDRRKS QMEEVQDELI HRLTIGRSAA QKKFHVPRQN VPVVNITYDS 851 900 ENSP00000281172/1-822 TPEDVKTWLQ SKGFNPVTVN SLGVLNGAQL FSLNKDELRT VCPEGARVYS ENSTTRP00000014526/1-816 TPEDVKTWLQ SKGFNPVTVN SLGVLNGAQL FSLNKDELRT VCPEGARVFS ENSBTAP00000000479/1-837 TPEEVKTWLQ SKGFNPVTVN SLGVLNGAQL FSLNKDELRT VCPEGARVFS bmy_09487T0/1-821 ------SW-- ---------- ---------- ------ELKA L--------- BACU016964/1-765 TPEDVKTWLQ SKGFSPVTVN SLGVLNGAQL FSLNKDELRT VCPEGARVFS 901 950 ENSP00000281172/1-822 QITVQKAALE DSSGSSELQE IMRRRQEKIS AAASDSGVES FDEGSSH- ENSTTRP00000014526/1-816 QITVQKAALE DNNGSSELQE IMRRRQEKIS AAASDSGVES FDEGSSH- ENSBTAP00000000479/1-837 QITVQKAALE DNSGSSELQE IMRRRQEKIS AAASDSGVES FDEGSITN bmy_09487T0/1-821 ---------- ---------- ---------- ---------- -------- BACU016964/1-765 QITVQKAALE DNNGSSELQE IMRRRQEKIS AAASDSGVES FDEGSSH-