KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:27 2014 Check: 00 .. Name: ENSTTRP00000008869/1-590 Len: 591 Check: 1070 Weight: 1.00 Name: ENSP00000386357/1-590 Len: 591 Check: 5591 Weight: 1.00 Name: ENSBTAP00000000484/1-519 Len: 591 Check: 4930 Weight: 1.00 Name: bmy_13538T0/1-519 Len: 591 Check: 6768 Weight: 1.00 Name: BACU005530/1-507 Len: 591 Check: 5172 Weight: 1.00 // 1 50 ENSTTRP00000008869/1-590 -VGFHLITQL RGMRVVLVLL PTLLLVMLTG AQKACPKNCR CDGKIVYCES ENSP00000386357/1-590 -MGFHLITQL KGMSVVLVLL PTLLLVMLTG AQRACPKNCR CDGKIVYCES ENSBTAP00000000484/1-519 IVGFHLITQL RGMRVVLVLL PTLLLVMLTG AQRACPKNCR CDGKIVYCES bmy_13538T0/1-519 MPGFHLITQL RGMRVVLVLL PTLLLVMLTG AQKXCPKNCR CDGKIVYCES BACU005530/1-507 ---------- --MRVVLVLL PTLLLVMLTG AQKACPKNCR CDGKIVYCES 51 100 ENSTTRP00000008869/1-590 HAFTDIPENI SGGSQGLSLR FNSIQKLKSN QFASLNQLIW LYLDHNYISS ENSP00000386357/1-590 HAFADIPENI SGGSQGLSLR FNSIQKLKSN QFAGLNQLIW LYLDHNYISS ENSBTAP00000000484/1-519 HAFADIPENI SGGSQGLSLR FNSIQKLKSN QFASLNQLIW LYLDHNYISS bmy_13538T0/1-519 HAFTDIPENI SGGSQGLSLR FNSIQKLKSN QFASLNQLIW LYLDHNYISS BACU005530/1-507 HAFTDIPENI SGGSQGLSLR FNSIQKLKSN QFANLNQLIW LYLDHNYISS 101 150 ENSTTRP00000008869/1-590 VDEDAFQGIR RLKELILSSN KITYLHNKTH PXXXXXXXXX XXXXXXXXXX ENSP00000386357/1-590 VDEDAFQGIR RLKELILSSN KITYLHNKTF HPVPNLRNLD LSYNKLQTLQ ENSBTAP00000000484/1-519 VDEDAFQGIR RLKELILSSN KITYLHNKTF HPVPNLRSLD LSYNKLQSLQ bmy_13538T0/1-519 VDEDAFQGIR RLKELILSSN KITYLHNKTF HLVPNLRSLD LSYNKLQTLQ BACU005530/1-507 VDEDAFQGIR RLKELILSSN KITYLHNKTF HPVPNLRSLD LSYNKLQTLQ 151 200 ENSTTRP00000008869/1-590 XXXXXXXXXX XXXXXRSNSL KTVPIRVFQD CRNLDFLDLG YNRLRSLSRN ENSP00000386357/1-590 SEQFKGLRKL IILHLRSNSL KTVPIRVFQD CRNLDFLDLG YNRLRSLSRN ENSBTAP00000000484/1-519 SEQFKGLRKL IILHLRSNSL KTVPIRVFQD CRNLDFLDLG YNRLRSLSRN bmy_13538T0/1-519 SGQFKGLRKL IILHLRSNSL KTVPIRVFQD CRNLDFLDLG YNRLRSLSRN BACU005530/1-507 SEQFKGLRKL IILHLRSNSL KTVPIRVFQD CRNLDFLDLG YNRLRSLSRN 201 250 ENSTTRP00000008869/1-590 AFAGLLKLKE LHLEHNQFSK INFAHFPRLF NLRSIYLQWN RIRSISQGLT ENSP00000386357/1-590 AFAGLLKLKE LHLEHNQFSK INFAHFPRLF NLRSIYLQWN RIRSISQGLT ENSBTAP00000000484/1-519 AFAGLLKLKE LHLEHNQFSK INFAHFPRLF NLRSIYLQWN RIRSISQGLT bmy_13538T0/1-519 AFAGLLKLKE LHLEHNQFSK INFAHFPRLF NLRSIYLQWN RIRSISQGLT BACU005530/1-507 AFAGLLKLKE LHLEHNQFSK INFAHFPRLF NLRSIYLQWN RIRSISQGLT 251 300 ENSTTRP00000008869/1-590 WTWSSLHNLD LSGNDIQGIE PGTFKCLPNL QKLNLDSNKL TNISQETVNA ENSP00000386357/1-590 WTWSSLHNLD LSGNDIQGIE PGTFKCLPNL QKLNLDSNKL TNISQETVNA ENSBTAP00000000484/1-519 WTWSSLHNLD LSGNDIQGIE PGTFKCLPNL QKLNLDSNKL TNISQETVNA bmy_13538T0/1-519 WTWSSLHNLD LSGNDIQGIE PGTFKCLPNL QKLNLDSNKL TNISQETVNA BACU005530/1-507 WTWSSLHNLD LSGNDIQGIE PGTFKCLPNL QKLNLDSNKL TNISQETVNA 301 350 ENSTTRP00000008869/1-590 WISLISITLS GNMWECSRSI CPLFYWLKNF KGNKESTMIC AGPKHIQGEK ENSP00000386357/1-590 WISLISITLS GNMWECSRSI CPLFYWLKNF KGNKESTMIC AGPKHIQGEK ENSBTAP00000000484/1-519 WISLISITLS GNMWECSRSI CPLFYWLKNF KGNKESTMIC AGPKHMQGEK bmy_13538T0/1-519 WISLISITLS GNMWECSRSI CPLFYWLKNF KGNKESTMIC AGPKHIQGEK BACU005530/1-507 WISLISITLS GNMWECSRSI CPLFYWLKNF KGNKESTMIC AGPKHIQGEK 351 400 ENSTTRP00000008869/1-590 VSDAVETYNI CSEVQVVNTE KSQLVPQTPQ KPLIIPKPTT SKSDPSQSTL ENSP00000386357/1-590 VSDAVETYNI CSEVQVVNTE RSHLVPQTPQ KPLIIPRPTI FKPDVTQSTF ENSBTAP00000000484/1-519 VSDAVETYNI CSEVQVVNTE KSHVVPQTPQ KPLIIPKPTT LKSDPSRSTL bmy_13538T0/1-519 VSDAVETYNI CSEVQVVNTE KSQLVPQTPQ KPLIIPKPTT SKSDPSQSTL BACU005530/1-507 VSDAVETYNI CSEVQVVNTE KSQLVPQTPQ KPLIIPKPTT SKSDPSQSTL 401 450 ENSTTRP00000008869/1-590 ETPSPSPGFQ IPGTEQEYEH VSFHKIIAGS VALFLSVAMI LLVIYVSWKR ENSP00000386357/1-590 ETPSPSPGFQ IPGAEQEYEH VSFHKIIAGS VALFLSVAMI LLVIYVSWKR ENSBTAP00000000484/1-519 ETPSPSPGFQ IPGTEQEYEH VSFHKIIAGS VALFLSVAMI LLVIYVSWKR bmy_13538T0/1-519 ETPSPSPGFQ IPGTEQEYEH VSFHKIIAGS VALFLSVAMI LLVIYVSWKR BACU005530/1-507 ETPSPSPGFQ IPGTEQEYEH VSFHKIIAGS VALFLSVAMI LLVIYVSWKR 451 500 ENSTTRP00000008869/1-590 YPASMKQLQQ HSIMKRRRKK TRESERQMNS PLQEYYVDYK PTNSETMDIS ENSP00000386357/1-590 YPASMKQLQQ HSLMKRRRKK ARESERQMNS PLQEYYVDYK PTNSETMDIS ENSBTAP00000000484/1-519 YPASMKQLQQ HSLMKRRRKK TRESERQMNS PLQEYYVDYK PTNSETMDIS bmy_13538T0/1-519 YPASMKQLQQ HSLMKRRRKK TRESERQMNS PLQEYYVDYK PTNSETMDIS BACU005530/1-507 YPASMKQLQQ HSLMKRRRKK TRESERQMNS PLQEYYVDYK PTNSETMDIS 501 550 ENSTTRP00000008869/1-590 VNGSGPCTYT ISGSRECEIL HHVKPLPYYS YDQPVIRYCQ AHQPLHVNKG ENSP00000386357/1-590 VNGSGPCTYT ISGSRECEMP HHMKPLPYYS YDQPVIGYCQ AHQPLHVTKG ENSBTAP00000000484/1-519 VNGSGPCTYT ISGSRECEV- ---------- ---------- ---------- bmy_13538T0/1-519 VNGSGPCTYT ISGSRECEV- ---------- ---------- ---------- BACU005530/1-507 VNGSGPCTYT ISGSRECEV- ---------- ---------- ---------- 551 600 ENSTTRP00000008869/1-590 YEAMSLEQDE TPSLELGPDH SFITTIARSA APAIYLERIT N ENSP00000386357/1-590 YETVSPEQDE SPGLELGRDH SFIATIARSA APAIYLERIA N ENSBTAP00000000484/1-519 ---------- ---------- ---------- ---------- - bmy_13538T0/1-519 ---------- ---------- ---------- ---------- - BACU005530/1-507 ---------- ---------- ---------- ---------- -