KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:27 2014 Check: 00 .. Name: ENSTTRP00000001951/1-708 Len: 711 Check: 171 Weight: 1.00 Name: bmy_17535T0/1-711 Len: 711 Check: 9059 Weight: 1.00 Name: BACU017235/1-709 Len: 711 Check: 5635 Weight: 1.00 Name: ENSP00000278412/1-709 Len: 711 Check: 5047 Weight: 1.00 Name: ENSBTAP00000000486/1-709 Len: 711 Check: 4398 Weight: 1.00 // 1 50 ENSTTRP00000001951/1-708 MAETLEFNDV YQEVKGSMXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_17535T0/1-711 MAETLEFNDV YQEVKGSMND GRLRLSRQGI IFKNSKTGKV DNIQAGEVTE BACU017235/1-709 MAETLEFNDV YQEVKGSMND GRLRLSRQGI IFKNSKTGKV DNIQAGEVTE ENSP00000278412/1-709 MAETLEFNDV YQEVKGSMND GRLRLSRQGI IFKNSKTGKV DNIQAGELTE ENSBTAP00000000486/1-709 MAETLEFNDV YQEVKGSMND GRLRLSRQGI IFKNSKTGKV DNIQAGELTE 51 100 ENSTTRP00000001951/1-708 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX EFEKLSDFFK THYRLELMEK bmy_17535T0/1-711 GIWRRVALGY GLKLLTKNGH VYKYDGFRES EFEKLSDFFK THYRLELMEK BACU017235/1-709 GIWRRVALGH GLKLLTKNGH VYKYDGFRES EFEKLSDFFK THYRLELMEK ENSP00000278412/1-709 GIWRRVALGH GLKLLTKNGH VYKYDGFRES EFEKLSDFFK THYRLELMEK ENSBTAP00000000486/1-709 GIWRRVALGH GLKLLTKNGH VYKYDGFRES EFEKLSDFFK THYRLELMEK 101 150 ENSTTRP00000001951/1-708 DLCVKGWNWG TVKFGGQLLS FDIGDQPVFE IPLSNVSQCT TGKNEVTLEF bmy_17535T0/1-711 DLCVKGWNWG TVKFGGQLLS FDIGDQPVFE IPLSNVSQCT TGKNEVTLEF BACU017235/1-709 DLCVKGWNWG TVKFGGQLLS FDIGDQPVFE IPLSNVSQCT TGKNEVTLEF ENSP00000278412/1-709 DLCVKGWNWG TVKFGGQLLS FDIGDQPVFE IPLSNVSQCT TGKNEVTLEF ENSBTAP00000000486/1-709 DLCVKGWNWG TVKFGGQLLS FDIGDQPVFE IPLSNVSQCT TGKNEVTLEF 151 200 ENSTTRP00000001951/1-708 HQNDDAEVSL MEVRFYVPPT QEDGVDPVEA FAQNVLSKAD VIQATXXXXX bmy_17535T0/1-711 HQNDDAEVSL MEVRFYVPPT QEDGVDPVEA FAQNVLSKAD VIQATGDAIC BACU017235/1-709 HQNDDAEVSL MEVRFYVPPT QEDGVDPVEA FAQNVLSKAD VIQATGDAIC ENSP00000278412/1-709 HQNDDAEVSL MEVRFYVPPT QEDGVDPVEA FAQNVLSKAD VIQATGDAIC ENSBTAP00000000486/1-709 HQNDDAEVSL MEVRFYVPPT QEDGVDPVEA FAQNVLSKAD VIQATGDAIC 201 250 ENSTTRP00000001951/1-708 XXXXXXXXXX XXXXXXXIYP HLLH-HGKTF DYKIPYTTVL RLFLLPHKDQ bmy_17535T0/1-711 IFRELQCLTP RGRYDIRIYP TFLHLHGKTF DYKIPYTTVL RLFLLPHKDQ BACU017235/1-709 IFRELQCLTP RGRYDIRIYP TFLHLHGKTF DYKIPYTTVL RLFLLPHKDQ ENSP00000278412/1-709 IFRELQCLTP RGRYDIRIYP TFLHLHGKTF DYKIPYTTVL RLFLLPHKDQ ENSBTAP00000000486/1-709 IFRELQCLTP RGRYDIRIYP TFLHLHGKTF DYKIPYTTVL RLFLLPHKDQ 251 300 ENSTTRP00000001951/1-708 RQMFFVISLD PPIKQSQTRY HFLILLFSKD EDISLTLNMN EEEVEKRFEG bmy_17535T0/1-711 RQMFFVISLD PPIKQGQTRY HFLILLFSKD EDISLTLNMN EEEVEKRFEG BACU017235/1-709 RQMFFVISLD PPIKQGQTRY HFLILLFSKD EDISLTLNMN EEEVEKRFEG ENSP00000278412/1-709 RQMFFVISLD PPIKQGQTRY HFLILLFSKD EDISLTLNMN EEEVEKRFEG ENSBTAP00000000486/1-709 RQMFFVISLD PPIKQGQTRY HFLILLFSKD EDISLTLNMN EEKVEKRFEG 301 350 ENSTTRP00000001951/1-708 RLTKNMSGSL YEMVSRVMKA LVNRKITVPG NFQGHSGAQC ITCSYKASSG bmy_17535T0/1-711 RLTKNMSGSL YEMVSRVMKA LVNRKITVPG NFQGHSGAQC ITCSYKASSG BACU017235/1-709 RLTKNMSGSL YEMVSRVMKA LVNRKITVPG NFQGHSGAQC ITCSYKASSG ENSP00000278412/1-709 RLTKNMSGSL YEMVSRVMKA LVNRKITVPG NFQGHSGAQC ITCSYKASSG ENSBTAP00000000486/1-709 RLTKNMSGSL YEMVSRVMKA LVNRKITVPG NFQGHSGAQC ITCSYKASSG 351 400 ENSTTRP00000001951/1-708 LLYPLERGFI YVHKPPVHIR FDEISFVNFA RGTTTTRSFD FEIETKQGTQ bmy_17535T0/1-711 LLYPLERGFI YVHKPPVHIR FDEISFVNFA RGTTTTRSFD FEIETKQGTQ BACU017235/1-709 LLYPLERGFI YVHKPPVHIR FDEISFVNFA RGTTTTRSFD FEIETKQGTQ ENSP00000278412/1-709 LLYPLERGFI YVHKPPVHIR FDEISFVNFA RGTTTTRSFD FEIETKQGTQ ENSBTAP00000000486/1-709 LLYPLERGFI YVHKPPVHIR FDEISFVNFA RGTTTTRSFD FEIETKQGTQ 401 450 ENSTTRP00000001951/1-708 YTFSSIEREE YGKLFDFVNA KKLNIKNRGL KEGMNPSYDE YADSDEDQHD bmy_17535T0/1-711 YTFSSIEREE YGKLFDFVNA KKLNIKNRGL KEGMNPSYDE YADSDEDQHD BACU017235/1-709 YTFSSIEREE YGKLFDFVNA KKLNIKNRGL KEGMNPSYDE YADSDEDQHD ENSP00000278412/1-709 YTFSSIEREE YGKLFDFVNA KKLNIKNRGL KEGMNPSYDE YADSDEDQHD ENSBTAP00000000486/1-709 YTFSSIEREE YGKLFDFVNA KKLNIKNRGL KEGMNPSYDE YADSDEDQHD 451 500 ENSTTRP00000001951/1-708 AYLERMKEEG KIREENANDS SDDSGEETDE SFNPGEEEED VAEXXXXXXX bmy_17535T0/1-711 AYLERMKEEG KIREENANDS SDDSGEETDE SFNPGEEEED VAEEFDSNAS BACU017235/1-709 AYLERMKEEG KIREENANDS SDDSGEETDE SFNPGEEEED VAEEFDSNAS ENSP00000278412/1-709 AYLERMKEEG KIREENANDS SDDSGEETDE SFNPGEEEED VAEEFDSNAS ENSBTAP00000000486/1-709 AYLERMKEEG KIREENANDS SDDSGEETDE SFNPGEEEED VAEEFDSNAS 501 550 ENSTTRP00000001951/1-708 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXVKK GKDPNAPKRP bmy_17535T0/1-711 ASSSSNEGDS DREEKKRKQL KKAKMAKDRK SRKKPVEVKK GKDPNAPKRP BACU017235/1-709 ASSSSNEGDS DREEKKRKQL KKAKMAKDRK SRKKPVEVKK GKDPNAPKRP ENSP00000278412/1-709 ASSSSNEGDS DRDEKKRKQL KKAKMAKDRK SRKKPVEVKK GKDPNAPKRP ENSBTAP00000000486/1-709 ASSSSNEGDS DREEKKRKQL KKAKMAKDRK SRKKPLEVKK GKDPNAPKRP 551 600 ENSTTRP00000001951/1-708 MSAYMLWLNA SREKIKSDHP GISITDLSKK AGEIWKGMSK EKKE--EWDR bmy_17535T0/1-711 MSAYMLWLNA SREKIKSDHP GISITDLSKK AGEIWKGMSK EKKERQEWDR BACU017235/1-709 MSAYMLWLNA SREKIKSDHP GISITDLSKK AGEIWKGMSK EKKE--EWDR ENSP00000278412/1-709 MSAYMLWLNA SREKIKSDHP GISITDLSKK AGEIWKGMSK EKKE--EWDR ENSBTAP00000000486/1-709 MSAYMLWLNA SREKIKSDHP GISVTDLSKK AGEIWKGMSK EKKE--EWDR 601 650 ENSTTRP00000001951/1-708 KAEDARREYE KAMKEYEGGR GESSKRDKSK KKKKVKVKME KKSTLSRGSS bmy_17535T0/1-711 KAEDARREYE KAMKEYEGGR GESSKRDKSK KKKKVKVKME KKSTPSRGSS BACU017235/1-709 KAEDARREYE KAMKEYEGGR GESSKRDKSK KKKKVKVKME KKSTPSRGSS ENSP00000278412/1-709 KAEDARRDYE KAMKEYEGGR GESSKRDKSK KKKKVKVKME KKSTPSRGSS ENSBTAP00000000486/1-709 KAEDARREYE KAMKEYEGGR GESSKRDKSK KKKKVKVKME KKSTPSRGSS 651 700 ENSTTRP00000001951/1-708 SKSSSRQLSE SFKSKEFVSS DESSSGENKS KKKRRRSEDS EEEELASTPP bmy_17535T0/1-711 SKSSSRQLSE SFKSKEFVSS DESSSGENKS KKKRRRSEDS EEEELASTPP BACU017235/1-709 SKSSSRQLSE SFKSKEFVSS DESSSGENKS KKKRRRSEDS EEEELASTPP ENSP00000278412/1-709 SKSSSRQLSE SFKSKEFVSS DESSSGENKS KKKRRRSEDS EEEELASTPP ENSBTAP00000000486/1-709 SKSSSRQLSE SFKSKEFVSS DESSSGENKG KKKRRRSEDS EEEELASTPP 701 750 ENSTTRP00000001951/1-708 SSEDSASGSD E bmy_17535T0/1-711 SSEDSASGSD E BACU017235/1-709 TSEDSASGSD E ENSP00000278412/1-709 SSEDSASGSD E ENSBTAP00000000486/1-709 SSEDSASGSD E