KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:29 2014 Check: 00 .. Name: ENSBTAP00000000499/1-474 Len: 501 Check: 4153 Weight: 1.00 Name: ENSP00000338572/1-495 Len: 501 Check: 4640 Weight: 1.00 Name: ENSTTRP00000014866/1-496 Len: 501 Check: 551 Weight: 1.00 Name: bmy_20287T0/1-374 Len: 501 Check: 9310 Weight: 1.00 Name: BACU010916/1-469 Len: 501 Check: 855 Weight: 1.00 // 1 50 ENSBTAP00000000499/1-474 ------LQHR RKHRSSPLTS SRPPPQATEK SSYLETTEIS LWTVVAAIQA ENSP00000338572/1-495 MAESAPARHR RKRRSTPLTS STLPSQATEK SSYFQTTEIS LWTVVAAIQA ENSTTRP00000014866/1-496 MAESAPARHR RKRRSTPLTS STLPPQAPEE SSYLQTTDIS LWTVVAAIQA bmy_20287T0/1-374 ---------- ---------- ---------- ---------- ---------- BACU010916/1-469 MAESAPARHR RKRRSTPLTS STLPPQAPEK SSYLQTTDIS LWTVVAAIQA 51 100 ENSBTAP00000000499/1-474 MEKKVESQAA RLLTLEGRAG TAEKKLADCE KTAVELGNQL EGKWAVLGTL ENSP00000338572/1-495 VEKKMESQAA RLQSLEGRTG TAEKKLADCE KMAVEFGNQL EGKWAVLGTL ENSTTRP00000014866/1-496 VEKKMESQAA RLQSLEGRTG TAEKKLADCE KTAVELGNQL EGKWAVLGTL bmy_20287T0/1-374 ---------- ---------- ---------- ---------- ---------- BACU010916/1-469 VEKKMESQAA RLQSLEGRTG TAEKKLADCE KTAVELGNQL EGKWAVLGTL 101 150 ENSBTAP00000000499/1-474 LQEYGLLQRR LENVENLLRN RNFWILRLPP GSNGEVPKVS RSLENDGVCF ENSP00000338572/1-495 LQEYGLLQRR LENVENLLRN RNFWILRLPP GSKGEAPKVS RSLENDGVCF ENSTTRP00000014866/1-496 LQEYGLLQRR LENVENLLRN RNFWVLRLPP GSKGEAPKMS RSL-NDGVCF bmy_20287T0/1-374 ---------- ---------- -------MPR GEDERLAPVS RSLENDGVCF BACU010916/1-469 LQEYGLLQRR LENVENLLRN RNFWVLRLPP GSKGEAPKVS RSLENDGVCF 151 200 ENSBTAP00000000499/1-474 SEQEWENLED WQKELYANVM KSNYETLVSL KVLGQPEGEV ELGAEMPGDL ENSP00000338572/1-495 TEQEWENLED WQKELYRNVM ESNYETLVSL KVLGQTEGEA ELGTEMLGDL ENSTTRP00000014866/1-496 EQE--ENLEG WQMELYTIAM NSSYETLVSL KVLGQPEGEA ELGTEMLGDL bmy_20287T0/1-374 SEQEWENLED WQKELYTNVM KSNYETLVSL KVLGQPEGEA ELGTEMLGDL BACU010916/1-469 SEQEWENLED WQKELYTNVM KSNYETLVSL ---------- ---------- 201 250 ENSBTAP00000000499/1-474 EEEESRGVHP VEEVVVKQET LYTQDSSADL PGECSGFANE QALLSPEQAE ENSP00000338572/1-495 EEEGPGGAHP AGGVMIKQEL QYTQEGPADL PGEFSCIAEE QAFLSPEQTE ENSTTRP00000014866/1-496 EEEDARGVHP AEGVMIKQEI QYTQDGSAEL PGEFSGIAEE HAFLSPEQPE bmy_20287T0/1-374 EEEDSRGVHP VEGVMIKQEI QYTQDGSADL PGEFSGIAEE HAFLSPEQPE BACU010916/1-469 ---------- MEGVMIKQEI QYTQDGSADL PGEFSGIAEE HAFLSPEQPE 251 300 ENSBTAP00000000499/1-474 LWDGQGSSIL LESGPADTRL QEPTDGGRDP GSGRTLGCPP KRKCHKQLQP ENSP00000338572/1-495 LWGGQGSSVL LETGPGDSTL EEPV-GSRVP SSSRTVGC-P KQKSHRQVQL ENSTTRP00000014866/1-496 LWDGQGRSVL LESGPGDTNP EEPIEGSRDP GSGRTLGCPP KQKSNRQLQL bmy_20287T0/1-374 LWDGQGRSVL LESGPGDTNP EEPIEGSRDP SGGRTLGCPP KQKSNRQLQL BACU010916/1-469 LWDGQGRSVL LESGPGDTNP EEPMEGSRDP SGGRTLGCPP KQKSNRQLQL 301 350 ENSBTAP00000000499/1-474 GRECGQGLQL RRDSAGPCGC PECEAPH--- ---------- ----PQTPSE ENSP00000338572/1-495 DQECGQGLKL KKDTSRPYEC SECEITFRYK QQLATHLRSH SGWGSCTPEE ENSTTRP00000014866/1-496 GQQRGQGLKL KRDTAGPYEC SECEAIFRCK QQLAAHLRTH SGWEPYTASE bmy_20287T0/1-374 GQQCGQGLKL KRDTAGPYGC SECEAIFRCK QQLATHLRTH SGWEPYTASE BACU010916/1-469 GQQCGQGLKL KRDTAGPYGC SECEAIFRCK QQLAAHLRTH SGWEPYTASE 351 400 ENSBTAP00000000499/1-474 PEAS----PR PRPQLKPPAR KAQSLQCDAC ARSFRCRVSL LTHQRCHLQE ENSP00000338572/1-495 PEESL----R PRPRLKPQTK KAKLHQCDVC LRSFSCKVSL VTHQRCHLQE ENSTTRP00000014866/1-496 PEESL--RPR PRPQLKPQPR KAKLHQCDVC TRSFSCRVSL LTHQRCHLQE bmy_20287T0/1-374 PEESLRPRPR PRPRLKPQPR KAKLHQCDVC TRSFSCRVSL LTHQRCHLQE BACU010916/1-469 PEESL--RPR PRPRLKPQPR KAKLHQCDVC TRSFSCRVSL LTHQRCHLQE 401 450 ENSBTAP00000000499/1-474 AARAGHPAQE RFSPNSLVAL PGHIPWRRSR GSLLCGYCGK SFSHPSDLVR ENSP00000338572/1-495 GPSAGQHVQE RFSPNSLVAL PGHIPWRKSR SSLICGYCGK SFSHPSDLVR ENSTTRP00000014866/1-496 GPGAGRRVQE RFSPNSLVAL PGHIPWRKSR SALICGYCGK SFSHPSDLVR bmy_20287T0/1-374 GPGAGHRVQE RFSPNSLVAL PGHIPWRKSR SALICGYCGK SFSHPSDLVR BACU010916/1-469 GPGAGHRVQE RFSPNSLVAL PGHIPWRKSR SALICGYCGK SFSHPSDLVR 451 500 ENSBTAP00000000499/1-474 HQRIHTGERP YSCPECEKSF VQKQHLLQHQ KIHQRERGGP ALQPARPSGL ENSP00000338572/1-495 HQRIHTGERP YSCTECEKSF VQKQHLLQHQ KIHQRERGGL ALEPGRPNGL ENSTTRP00000014866/1-496 HQRIHTGERP YSCPECEKSF VQKQHLLQHQ KIHQRERGGP ALEPGRPNGL bmy_20287T0/1-374 HQRIHTGERP YSCPECEKSF VQKQHLLQHQ KIHQRARGGP ALEPGRPNGL BACU010916/1-469 HQRIHTGERP YSCPECEKSF VQKQHLLQHQ KIHQRERGGP ALEPGRPNGL 501 550 ENSBTAP00000000499/1-474 L ENSP00000338572/1-495 L ENSTTRP00000014866/1-496 L bmy_20287T0/1-374 L BACU010916/1-469 L