KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:30 2014 Check: 00 .. Name: ENSTTRP00000002711/1-370 Len: 370 Check: 4130 Weight: 1.00 Name: ENSP00000302413/1-370 Len: 370 Check: 9897 Weight: 1.00 Name: ENSBTAP00000000502/1-370 Len: 370 Check: 6894 Weight: 1.00 Name: bmy_00694T0/1-361 Len: 370 Check: 1579 Weight: 1.00 Name: BACU011982/1-328 Len: 370 Check: 1612 Weight: 1.00 // 1 50 ENSTTRP00000002711/1-370 MVGKLKQNLL LACLVISSVT VFYLGQHAME CHHRIEERSQ PLKLENTKTT ENSP00000302413/1-370 MVGKLKQNLL LACLVISSVT VFYLGQHAME CHHRIEERSQ PVKLESTRTT ENSBTAP00000000502/1-370 MVGKLKQNLL LACLVISSVT VFYLGQHAME CHHRIEERSQ PLKLENIKTT bmy_00694T0/1-361 MVGKLKQNLL LACLVISSVT VFYLGQHAME CHHRIEERSQ PLKLENTKTT BACU011982/1-328 ---------- ---------- --------ME CHHRIEERSQ PLKLENTKTT 51 100 ENSTTRP00000002711/1-370 VRTGLDIKAN KTFAYHKDMP LIFIGGVPRS GTTLMRAMLD AHPDIRCGEE ENSP00000302413/1-370 VRTGLDLKAN KTFAYHKDMP LIFIGGVPRS GTTLMRAMLD AHPDIRCGEE ENSBTAP00000000502/1-370 VRTALDIKAN KTFAYHKDMP LIFIGGVPRS GTTLMRAMLD AHPDIRCGEE bmy_00694T0/1-361 VRTGLDIKAN KTFAYHKDMP LIFIGGVPRS GTTLMRAMLD AHPDIRCGEE BACU011982/1-328 VRTGLDIKAN KTFAYHKDMP LIFIGGVPRS GTTLMRAMLD AHPDIRCGEE 101 150 ENSTTRP00000002711/1-370 TRVIPRILAL KQIWSRSSKE KIRLXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000302413/1-370 TRVIPRILAL KQMWSRSSKE KIRLDEAGVT DEVLDSAMQA FLLEIIVKHG ENSBTAP00000000502/1-370 TRVIPRILAL KQIWSRSSKE KIRLDEAGVT DEVLDSAMQA FLLEIIVKHG bmy_00694T0/1-361 TRVIPRILAL KQIWSRSSKE KIRLDEAGVT DEVLDSAMQA FLLEIIVKHG BACU011982/1-328 TRVIPRILAL KQIWSRSSKE KIRLDEAGVT DEVLDSAMQA FLLEIIVKHG 151 200 ENSTTRP00000002711/1-370 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000302413/1-370 EPAPYLCNKD PFALKSLTYL SRLFPNAKFL LMVRDGRASV HSMISRKVTI ENSBTAP00000000502/1-370 EPAPYLCNKD PFALKSLTYL ARLFPNAKFL LMVRDGRASV HSMISRKVTI bmy_00694T0/1-361 EPAPYLCNKD PFALKSLTYL ARLFPNAKFL LMVRDGRASV HSMISRKVTI BACU011982/1-328 EPAPYLCNKD PFALKSLTYL ARLFPNAKFL LMVRDGRASV HSMISRKVTI 201 250 ENSTTRP00000002711/1-370 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000302413/1-370 AGFDLNSYRD CLTKWNRAIE TMYNQCMEVG YKKCMLVHYE QLVLHPERWM ENSBTAP00000000502/1-370 AGFDLNSYRD CLTKWNRAIE TMYNQCMEVG YKKCMLVHYE QLVLHPERWM bmy_00694T0/1-361 AGFDLNSYRD CLTKWNRAIE TMYNQCMEVG YKKCMLVHYE QLVLHPERWM BACU011982/1-328 AGFDLNSYRD CLTKWNRAIE TMYNQCMEVG YKKCMLVHYE QLVLHPERWM 251 300 ENSTTRP00000002711/1-370 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVERSTDQV IKPVNVGALS ENSP00000302413/1-370 RTLLKFLQIP WNHSVLHHEE MIGKAGGVSL SKVERSTDQV IKPVNVGALS ENSBTAP00000000502/1-370 RTVLKFLQIP WNHSVLHHEE MIGKAGGVSL SKVERSTDQV IKPVNVGALS bmy_00694T0/1-361 RTLLKFLQIP WNHSVLHHEE MIGKAGGVSL SKVERSTDQV IKPVNVGALS BACU011982/1-328 RTLLKFLQIP WNHSVLHHEE MIGKAGGVSL SKVERSTDQV IKPVNVGALS 301 350 ENSTTRP00000002711/1-370 KWVGKIPPDV LQDMAVIAPM LAKLGYDPYA NPPNYGKPDP KILENTRRVY ENSP00000302413/1-370 KWVGKIPPDV LQDMAVIAPM LAKLGYDPYA NPPNYGKPDP KIIENTRRVY ENSBTAP00000000502/1-370 KWVGKIPPDV LQDMAVIAPM LAKLGYDPYA NPPNYGKPDP KILENTRRVY bmy_00694T0/1-361 KWVGKIPPDV LQDMAVIAPM LAKLGYDPYA NPPNYGKPDP KILENTRR-- BACU011982/1-328 KWVGKIPPDV LQDMAVIAPM LAKLGYDPYA NPPNYGKPDP KILENTRRV- 351 400 ENSTTRP00000002711/1-370 KGEFQLPEFL KGKPQTEQVE ENSP00000302413/1-370 KGEFQLPDFL KEKPQTEQVE ENSBTAP00000000502/1-370 KGEFQLPEFL KEKPQSEQVE bmy_00694T0/1-361 -----LDYLL KQVTHSPR-- BACU011982/1-328 ---------- ---SEIFTVN