KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:30 2014 Check: 00 .. Name: ENSP00000339404/1-400 Len: 466 Check: 9582 Weight: 1.00 Name: bmy_16734T0/1-225 Len: 466 Check: 5383 Weight: 1.00 Name: ENSBTAP00000000504/1-357 Len: 466 Check: 6908 Weight: 1.00 Name: BACU019612/1-360 Len: 466 Check: 5260 Weight: 1.00 Name: ENSTTRP00000009236/1-364 Len: 466 Check: 8802 Weight: 1.00 // 1 50 ENSP00000339404/1-400 ---------- ---------- ---------- ---------- ---------- bmy_16734T0/1-225 MRTSLVRPEE ISSYTPSAAG SCFSTYFLHF TSPCRXCWIV RYFTGLLFGE ENSBTAP00000000504/1-357 ---------- ---------- ---------- ---------- ---------- BACU019612/1-360 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009236/1-364 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000339404/1-400 --MEVLRPQL IRIDGRNYRK NPVQEQTYQH EEDEEDFYQG SMECADEPCD bmy_16734T0/1-225 SIMEVLRPQL IRIGGRVYRK NPIQEQTYQH EDEDDDCYQG LVECAEESCE ENSBTAP00000000504/1-357 --MEVLRPQL IKIGGRVYRK NPIQEQTYQH EEEDDDYYQG LVECAEEPCE BACU019612/1-360 --MEVLRPQL IRIGGRVYRK NPIQEQTYQH EDEDDDCYQG LVECAEESCE ENSTTRP00000009236/1-364 --MEVLRPQL IRIGGRVYRK NPIQEQTYQH EDEDDDCYQG LVECAEESCE 101 150 ENSP00000339404/1-400 AYEVEQTPQG FRSTLRAPSL LYNLIHLNTS NDCGFQKITL DCQNIYTWKS bmy_16734T0/1-225 GYEVVQTPQG FRCTVKAPSL LYK------- ---------- ---------- ENSBTAP00000000504/1-357 TYEVVQTPQG FRCTVKAPSL LYK------- ---------- ---------- BACU019612/1-360 AYEVVQTPQG FRCTVKAPSL LYNLICFNTS NYYGFQKITL DCQN-YARRP ENSTTRP00000009236/1-364 GYEVVQTPQG FRCTLKAPSL LYNLICFNTS NYCGFQKITL DCQNIYARRP 151 200 ENSP00000339404/1-400 R--------- ----HIVGKR GDTRKKIEME TKTSISIPKP GQDGEIVITG bmy_16734T0/1-225 ---------- ----HIVGKR GDTRKKLEVE TKTSISIPKP GQEGEXVITG ENSBTAP00000000504/1-357 ---------- ----HIVGKR GDTRKKLEVE TKTSISIPKP GQEGEIVITG BACU019612/1-360 RQVMQMSQQM IEVQHIVGKR GDTRKKLEVE TKTSISIPKP GQEGEIVITG ENSTTRP00000009236/1-364 RQVM------ ----HIVGKR GDTRKKLEVE TKTSISIPKP GQEGEIVITG 201 250 ENSP00000339404/1-400 QHRNGVISAR TRIDVLLDTF RRKQPFTHFL AFFLNEVEVQ EGFLRFQEEV bmy_16734T0/1-225 QHRSGVISAR TRIDVLLLTF RRKQPFTHFL AFFLNDAEVQ ERFLKFQEEV ENSBTAP00000000504/1-357 QHRSGVVSAR TRIDVLLLTF RRKQPFTHFL AFFLNEAEVQ ERFLKFQEEV BACU019612/1-360 QHRSGVISAQ TRIDVLLLTF RRKQPFTHFL AFFLNEAEVQ EQFLKFQEEV ENSTTRP00000009236/1-364 QHRSGVISAR TRIDVLLLTF RRKQPFTHFL AFFLNEAEVQ ERFLKFQEEV 251 300 ENSP00000339404/1-400 LAKCSMDHGV DSSIFQNPKK LHLTIGMLVL LSEEEIQQTC EMLQQCKEEF bmy_16734T0/1-225 LEKCSM---- ---------- ---------- ---------- ---------- ENSBTAP00000000504/1-357 LEKCSMDHGV DSSIFQNPKK LHLTIGMLVL LSEQEIQQTC EMLQQCKEEF BACU019612/1-360 LEKCSMDHGV DSSIFQNPKK LHLTIGMLVL LSEQEIQQTC EMLQQCKEEF ENSTTRP00000009236/1-364 LEKCSMDHGV DSTIFQNPKK LHLTIGMLVL LSEQEIQQTC EMLQQCKEEF 301 350 ENSP00000339404/1-400 INDISGGKPL EVEMAGIEYM NDDPGMVDVL YAKVHMKDGS NRLQELVDRV bmy_16734T0/1-225 ---------- ---------- ---------- -----VSSKQ NKTKS----- ENSBTAP00000000504/1-357 IDDISGGKPL EVEMSGIEYM NDDPGMVDVL YAKVHMKDGS NRLQELVDRV BACU019612/1-360 IDDISGGKPL EVEVAGIEYM NDDPGMVDVL YAKVRMKDGS NRLQELVDRV ENSTTRP00000009236/1-364 IDDISGGKPL EVEMAGIEYM NDDPGMVDVL YAKVHMKDGS NRLQELVDRV 351 400 ENSP00000339404/1-400 LERFQASGLI VKEWNSVKLH ATVMNTLFRK DPNAEGRYNL YTAEGKYIFK bmy_16734T0/1-225 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000504/1-357 LERFQASGLI VKEWNSVKLH ATVMNTLFRK DPNAEGRYNL YTADGKYIFK BACU019612/1-360 LERFQASGLI VKEWNSVKLH ATVMNTLFRK DPNAEGRYNL YTTDGKYIFK ENSTTRP00000009236/1-364 LERFQASGLI VKEWNSVKLH ATVMNTLFRK DPNAEGRYNL YTTDGKYAFK 401 450 ENSP00000339404/1-400 ERESFDGRNI LKSFALLPRL EYNDAISAHC NLCLPGSSDS PASASQVAGI bmy_16734T0/1-225 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000504/1-357 ERESFDGRNI LKLFE----- ---------- NFYFGTLKLN SIHISQRFTV BACU019612/1-360 ERESFDGRNI LKV------- ---------- ---------- ---------- ENSTTRP00000009236/1-364 ERESFDGRNI LKVF------ ---------- ---------- ---------- 451 500 ENSP00000339404/1-400 TGVSDAYSQS LPGKS- bmy_16734T0/1-225 ---------- ------ ENSBTAP00000000504/1-357 DSFGNYASCG QIDFS- BACU019612/1-360 ---------- ------ ENSTTRP00000009236/1-364 ----NIYSQS IPGKPL