KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:30 2014 Check: 00 .. Name: ENSP00000332979/1-518 Len: 561 Check: 9480 Weight: 1.00 Name: bmy_13636T0/1-525 Len: 561 Check: 5707 Weight: 1.00 Name: ENSBTAP00000000507/1-517 Len: 561 Check: 209 Weight: 1.00 Name: BACU004407/1-424 Len: 561 Check: 2896 Weight: 1.00 Name: ENSTTRP00000006672/1-414 Len: 561 Check: 8139 Weight: 1.00 // 1 50 ENSP00000332979/1-518 MGALARALLL PLLAQWLLRA APELAPAPFT LPLRVAAATN RVVAPTPGPG bmy_13636T0/1-525 ---------- ---------- --------MC SPCCVPGITE LMLALKLGTK ENSBTAP00000000507/1-517 MGALARALLL PLLAQWLLRA APALASAPFT LPLRVASATS RGAVPTPGPG BACU004407/1-424 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006672/1-414 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000332979/1-518 TPAERHADGL ALALEPALAS PAGAANFLAM VDNLQGDSGR GYYLEMLIGT bmy_13636T0/1-525 TPTLKCLHFN DLTLRFI--- ---CVISVIY AENMEGSNRK NERFP--HKT ENSBTAP00000000507/1-517 PPAEPRADGL ALALEPA--- -GGAANFLAM VDNLQGDSGR GYYLEMQIGT BACU004407/1-424 ---------- ---------- ---------- ---------- -------MET ENSTTRP00000006672/1-414 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000332979/1-518 PPQK---LQI LVDTGSSNF- AVAGTPHSYI DTYFDTER-- ---------- bmy_13636T0/1-525 PPPTGSTANI GVGCGVVTVT CVSVTCHQHP PSCFDMSIIS LGHRDDLEKE ENSBTAP00000000507/1-517 PPQKKQKLQI LVDTGSSNF- AVAGAPHPYI DSYFDAER-- ---------- BACU004407/1-424 ALRTQGHLQI LVDTGSSNF- AVAGAPHPFV DSYFDTER-- ---------- ENSTTRP00000006672/1-414 -------LQI LVDTGSSNF- AVAGAPHPYV DSYFDTER-- ---------- 151 200 ENSP00000332979/1-518 ---------- ------SSTY RSKGFDVTVK YTQGSWTGFV GEDLVTIPKG bmy_13636T0/1-525 PVTPGGRAGP EEGQPWSSTY RPKGFDVTVK YTQGSWTGFV GEDVVTIPKG ENSBTAP00000000507/1-517 ---------- ------SSTY RPKGFDVTVK YTQGSWTGFV GEDVVTIPKG BACU004407/1-424 ---------- ------SSTY RPKGFDVTVK YTQGSWTGFV GEDVVTIPKG ENSTTRP00000006672/1-414 ---------- ------SSTY RPKGFDVTVK YTQGSWTGFV GEDVVTIPKG 201 250 ENSP00000332979/1-518 FNTSFLVNIA TIFESENFFL PGIKWNGILG LAYATLAKPS SSLETFFDSL bmy_13636T0/1-525 FNSSFLVNIA TIFESENFFL PGIKWNGILG LAYATLAKPS SSLETFFDSL ENSBTAP00000000507/1-517 FNSSFLVNIA TIFESENFFL PGIRWNGILG LAYATLAKPS SSLETFFDSL BACU004407/1-424 FNSSFLVNIA TIFESENFFL PGIKWNGILG LAYATLAKPS SSLETFFDSL ENSTTRP00000006672/1-414 FNSSFLVNIA TIFESENFFL PGIKWNGILG LAYATLAKPS SSLETFFDSL 251 300 ENSP00000332979/1-518 VTQANIPNVF SMQMCGAGLP VAGSGTNGGS LVLGGIEPSL YKGDIWYTPI bmy_13636T0/1-525 VAQAKIPNVF SMQMCGAGLP VAGSGTNGGS LVLGGIEPTL YKGDIWYTPI ENSBTAP00000000507/1-517 VAQAKIPNIF SMQMCGAGLP VAGSGTNGGS LVLGGIEPTL YKGDIWYTPI BACU004407/1-424 VAQAKIPNVF SMQMCGAGLP VAGSGTNGGS LVLGGIEPTL YKGDIWYTPI ENSTTRP00000006672/1-414 VAQAKIPNVF SMQMCGAGLP VAGSGTNGGS LVLGGIEPTL YKGDIWYTPI 301 350 ENSP00000332979/1-518 KEEWYYQIEI LKLEIGGQSL NLDCREYNAD KAIVDSGTTL LRLPQKVFDA bmy_13636T0/1-525 KEEWYYQIEI LKLEIGGQSL NLDCREYNAD KAIVDSGTTL LRLPQKVFDA ENSBTAP00000000507/1-517 KEEWYYQIEI LKLEIGGQSL NLDCREYNAD KAIVDSGTTL LRLPQKVFDA BACU004407/1-424 KEEWYYQIEI LKLEIGGQSL NLDCREYNAD KAIVDSGTTL LRLPQKVFDA ENSTTRP00000006672/1-414 KEEWYYQIEI LKLEIGGQSL NLDCREYNAD KAIVDSGTTL LRLPQKVFDA 351 400 ENSP00000332979/1-518 VVEAVARASL IPEFSDGFWT GSQLACWTNS ETPWSYFPKI SIYLRDENSS bmy_13636T0/1-525 VVEAVARTSL IPEFSDGFWT GSQLACWTNS ETPWSYFPKI SIYLRDENSS ENSBTAP00000000507/1-517 VVEAVARTSL IPEFSEGFWT GSQLACWTNS ETPWSYFPKI SIYLRDENSS BACU004407/1-424 VVEAVARASL IPEFSDGFWT GSQLACWTNS ETPWSYFPKI SIYLRDENSS ENSTTRP00000006672/1-414 VVEAVARTSL IPEFSDGFWT GSQLACWTNS ETPWSYFPKI SIYLRDENSS 401 450 ENSP00000332979/1-518 RSFRITILPQ LYIQPMMGAG LNYECYRFGI SPSTNALVIG ATVMEGFYVI bmy_13636T0/1-525 RSFRITVLPQ LYIQPMMGAG MNYECYRFGI SPSTNALVIG ATVMEGFYVV ENSBTAP00000000507/1-517 RSFRITILPQ LYIQPMMGAG LNYECYRFGI SPSTNALVIG ATVMEGFYVV BACU004407/1-424 RSFRITILPQ LYIQPMMGAG LNYECYRFGI SPSTNALVIG ATVMEGFYVV ENSTTRP00000006672/1-414 RSFRITILPQ LYIQPMMGAG LNYECYRFGI SPSTNALVIG ATVMEGFYVV 451 500 ENSP00000332979/1-518 FDRAQKRVGF AASPCA---- -------EIA GAAVSEISGP FSTEDVASNC bmy_13636T0/1-525 FDRARKRVGF AASPCADILV MKSELNTEIA GAPVSEISGP FSTEDIASNC ENSBTAP00000000507/1-517 FDRAQKRVGF AASPCA---- -------EIA GAPVSEISGP FSTEDIASNC BACU004407/1-424 FDRARKRVGF AASPCA---- -------EIT GAPVSEISGP FSTEDIASNC ENSTTRP00000006672/1-414 FDRARKRVGF AASPCA---- -------EIA GAPVSEISGP FSTEDIASNC 501 550 ENSP00000332979/1-518 VPAQSLSEPI LWIVSYALMS VCGAILLVLI VLLLLPFRCQ RRPRDPEVVN bmy_13636T0/1-525 VPALPLNEPI LWIVSYTLMS VCGIILLILI ILLLLPFRCR HLPPDPEVVN ENSBTAP00000000507/1-517 VPALPLNEPV LWIVSYTLMS VCGVILLVLI TLLLLPVRCR HHPRDPEVVN BACU004407/1-424 VPALPLNEPI LWIVSYTLMS VCGIILLILI ILLLLPFRCR HLPPDPEVVN ENSTTRP00000006672/1-414 VPALPLSEPI LWIVSYTLMS VCGIILLTLI ILLLLPFRCR HLPPDPEVVN 551 600 ENSP00000332979/1-518 DESSLVRHRW K bmy_13636T0/1-525 DESSLVRHRW K ENSBTAP00000000507/1-517 DESSLVRHRW K BACU004407/1-424 DESSLVRHRW K ENSTTRP00000006672/1-414 DESSLVRHRW K