KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:11:31 2014  Check: 00 ..

 Name: ENSP00000341992/1-192     Len:    217  Check:  8126  Weight:  1.00
 Name: bmy_04843T0/1-192         Len:    217  Check:  1526  Weight:  1.00
 Name: BACU009397/1-171          Len:    217  Check:  5590  Weight:  1.00
 Name: ENSTTRP00000007921/1-169  Len:    217  Check:  9531  Weight:  1.00
 Name: ENSBTAP00000000513/1-176  Len:    217  Check:  7838  Weight:  1.00

//


                          1                                                   50
ENSP00000341992/1-192     MGTFDLWTDY LGLAHLVRAL SGKEGPETRL SPQPEPEPML EPVSALEPMP 
bmy_04843T0/1-192         MGTFNLWTDY LGLARLVGAL RGEEEPEARL DPQAE----- ---------- 
BACU009397/1-171          MGTFNPWTDY LGLARLVGAL RGEEEPETRL DPQTE----- ---------- 
ENSTTRP00000007921/1-169  MGSFNLWTDY LGLARLVEAL RGEEEPEIRL DPQPE----- ---------- 
ENSBTAP00000000513/1-176  MGTFNLWTDY LGLARLVGAQ REEEEPETRL DRQPE----- ---------- 


                          51                                                 100
ENSP00000341992/1-192     APESVPVPGP -KDQKRSLES SPAPERLCSF CKHNGESRAI YQSHVLKDEA 
bmy_04843T0/1-192         -----PVPGP -EGQTPSPES SPAPERLCSF CKHNGESRAI YQSHVLKDEA 
BACU009397/1-171          -----PVPGL -EGQTPSPES SPAPERLCTF CKHNGESRAI YQSHVLKDEA 
ENSTTRP00000007921/1-169  -----PVPEP EEGQTHSPES SPAPERLCSF CKHNGESRAI YQSHVLKDEA 
ENSBTAP00000000513/1-176  -----AVPEP -GGQRPSPES SPAPERLCSF CKHNGESRAI YQSHVLKDEA 


                          101                                                150
ENSP00000341992/1-192     GRVLCPILRD YVCPQCGATR ERAHTRRFCP LTGQGYTSVY SHTTRNSAGK 
bmy_04843T0/1-192         GRVLCPILRD YVCPQCGATR EHAHTRRFCP LTGQGYTSVY SYTTRNSAGR 
BACU009397/1-171          GRVLCPILRD YVCPQCGATR EHAHTRRFCP LTGQGYTSVY SYTTRNSAGR 
ENSTTRP00000007921/1-169  GRVLCPILRD YVCPQCGATR DHAHTRRFCP LTGQGYTSVY SYTTRNSAGR 
ENSBTAP00000000513/1-176  GRVLCPILRD YVCPQCGATR ERAHTRRFCP LTGQGYTSVY SYTTRNSAGK 


                          151                                                200
ENSP00000341992/1-192     KLVRPDKAKT QDTGH--RRG GGGGAGFRGA GK--SEPSPS CSPSMST--- 
bmy_04843T0/1-192         KLARSDKAKT PDSGH--RRG GGGGGGACAG GW--GDSRRG GLPWAEPLGA 
BACU009397/1-171          KLARSDKAKT ADSGH--RRG GGGG-GACAG GW--GDSRRG VCPGLSP--- 
ENSTTRP00000007921/1-169  KLVRSDKAKT QDSGH--CRG G----GSKGV GK--PEPPSS CLPSTSA--- 
ENSBTAP00000000513/1-176  KLVRSDKART QDPGHGPRRG GGACAGSKGA RKSSGTPPSS CCPSTSA--- 


                          201                                                250
ENSP00000341992/1-192     ---------- ------- 
bmy_04843T0/1-192         FVKWVNPWGH PLKRVGE 
BACU009397/1-171          ---------- ------- 
ENSTTRP00000007921/1-169  ---------- ------- 
ENSBTAP00000000513/1-176  ---------- -------