KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:34 2014 Check: 00 .. Name: bmy_06932T0/1-302 Len: 302 Check: 9719 Weight: 1.00 Name: ENSP00000302648/1-197 Len: 302 Check: 8058 Weight: 1.00 Name: ENSTTRP00000009021/1-197 Len: 302 Check: 494 Weight: 1.00 Name: BACU002582/1-122 Len: 302 Check: 6653 Weight: 1.00 Name: ENSBTAP00000000528/1-197 Len: 302 Check: 9828 Weight: 1.00 // 1 50 bmy_06932T0/1-302 AGALLPSRTP LGASGEGWKR GQPESPPQPL GGRDPDTPYA LWSTRGRGGH ENSP00000302648/1-197 ---------- ----MQRWK- ---------- ---------- ---------- ENSTTRP00000009021/1-197 ---------- ----MQRWK- ---------- ---------- ---------- BACU002582/1-122 ---------- ----MQRWK- ---------- ---------- ---------- ENSBTAP00000000528/1-197 ---------- ----MQRWK- ---------- ---------- ---------- 51 100 bmy_06932T0/1-302 PDPADPGRRA AVAAQLHAEV NICQWRVPAA FPARRRRCRR GHGVLRQTEA ENSP00000302648/1-197 --------AA ALASVLCSSV -LSIWM---- -------CRE G--------- ENSTTRP00000009021/1-197 --------AV ALASVLCSSV -LSIWM---- -------CWE G--------- BACU002582/1-122 --------AA ALASVLCSSV -LSIWM---- -------CRE G--------- ENSBTAP00000000528/1-197 --------AA ALASVLCSSV -LSIWM---- -------CRE G--------- 101 150 bmy_06932T0/1-302 VWLTIPCTQA EDAALEGGGL GLGALQLRAL HLDVSGRPAP QPPPRTRACP ENSP00000302648/1-197 ---------- ---LLLSHRL GPALVPLH-- ---------- -RLPRTLDAR ENSTTRP00000009021/1-197 ---------- ---LLLSHRL GPALAPLR-- ---------- -RPPRTLDAR BACU002582/1-122 ---------- ---LLLSHRL GPALAPLR-- ---------- -RLPRTLDAR ENSBTAP00000000528/1-197 ---------- ---LLLGHRL GPALAPLR-- ---------- -RPPRTLDAR 151 200 bmy_06932T0/1-302 AAPAASHPGR PNRPPGPGAP DAVELRELTP WAGRSPGPRR RAGPRRRRAR ENSP00000302648/1-197 IARLAQY--- --RALLQGAP DAMELRELTP WAGRPPGPRR RAGPRRRRAR ENSTTRP00000009021/1-197 IARLAQY--- --RALLQGAP DAVELRELTP WAGRSPGPRR RAGPRRRRAR BACU002582/1-122 IARLAQC--- ---------- ---------- ---------- ---------- ENSBTAP00000000528/1-197 IARLAQY--- --RALLQGAP DAVELRELTP WAGRSPGPRR RPGPRRRRAR 201 250 bmy_06932T0/1-302 ARSGTRPCGL RELEVRVSEL GLGYASDETV LFRYCAGACE AAARVYDLGL ENSP00000302648/1-197 ARLGARPCGL RELEVRVSEL GLGYASDETV LFRYCAGACE AAARVYDLGL ENSTTRP00000009021/1-197 ARSGTRPCGL RELEVRVSEL GLGYASDETV LFRYCAGACE AATRVYDLGL BACU002582/1-122 ---------- ---------- ---------- -------ACE AAARVYDLGL ENSBTAP00000000528/1-197 ARSGTRPCGL RELEVRVSEL GLGYASEETV LFRYCAGACE AAARVYDLGL 251 300 bmy_06932T0/1-302 RRLRQRRRVR RERVRAQPCC RPTAYEDEVS FLDTHSRYHT VHELSARECA ENSP00000302648/1-197 RRLRQRRRLR RERVRAQPCC RPTAYEDEVS FLDAHSRYHT VHELSARECA ENSTTRP00000009021/1-197 RRLRQRRRVR RERVRAQPCC RPTAYEDEVS FLDTHSRYHT VHELSARECA BACU002582/1-122 RRLRQRRRVR RERVRAQPCC RPTAYEDEVS FLDTHSRYHT VHELSARECA ENSBTAP00000000528/1-197 RRLRQRRRVR RERVRAQPCC RPTAYEDEVS FLDTHSRYHT VHELSARECA 301 350 bmy_06932T0/1-302 CV ENSP00000302648/1-197 CV ENSTTRP00000009021/1-197 CV BACU002582/1-122 CV ENSBTAP00000000528/1-197 CV