KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:11:37 2014 Check: 00 ..
Name: bmy_14341T0/1-208 Len: 219 Check: 3362 Weight: 1.00
Name: BACU012219/1-111 Len: 219 Check: 7024 Weight: 1.00
Name: ENSP00000363591/1-211 Len: 219 Check: 801 Weight: 1.00
Name: ENSTTRP00000006555/1-212 Len: 219 Check: 2691 Weight: 1.00
Name: ENSBTAP00000000549/1-211 Len: 219 Check: 521 Weight: 1.00
//
1 50
bmy_14341T0/1-208 ---MWAPTPI RDLAPFSAHA CPLSLGPALV SENTVGTAKE GGPRP----G
BACU012219/1-111 ---MKGP--- ---------- ---------- ---------- ----------
ENSP00000363591/1-211 MASGQGPGPP R-------QE C-GEPALPSA SEEQVAQDTE EVFRSYVFYR
ENSTTRP00000006555/1-212 MASGQGPGPP R-------QG CEEEPDPSST SEEQVARDTE EVFRSYVFYR
ENSBTAP00000000549/1-211 MASGQGPGPP G-------QD C-DEPDPSST SEEQVARDTE EVFRSYVFYR
51 100
bmy_14341T0/1-208 HLGQESFAVS PGPSSPA--- -AYRSSSTMG QVGHQLAIIG DDINRRYDSE
BACU012219/1-111 ---------- ---------- ---------- ---------- ----------
ENSP00000363591/1-211 HQQEQEAEGV AAPADPEMVT LPLQPSSTMG QVGRQLAIIG DDINRRYDSE
ENSTTRP00000006555/1-212 HQQEQEAEGA AAPTDPEMVT LSLEPSSTMG QVGRQLAIIG DDINRRYDSE
ENSBTAP00000000549/1-211 HQQEQEAEGA AAPTDPEMVT LHPEPSSTMG QVGRQLAVIG DDINRRYDAE
101 150
bmy_14341T0/1-208 FQAMLQHLQP TAENAYEYFT KIASSLFESG INWGRVVALL GFGYRLALHV
BACU012219/1-111 -------LEV STDYIFS--- --ARSLFESS INWGRVVALL GFGYRLALHV
ENSP00000363591/1-211 FQTMLQHLQP TAENAYEYFT KIATSLFESG INWGRVVALL GFGYRLALHV
ENSTTRP00000006555/1-212 FQAMLQHLQP TAENAYEYFT KIASSLFESG INWGRVVALL GFGYRLALHV
ENSBTAP00000000549/1-211 FQAMLQHLQP TADNAYEYFT KIASSLFESG INWGRVVALL GFGYRLALHV
151 200
bmy_14341T0/1-208 YQRGLTGFLG QVTRFVADFM LHHCIARWIA QRGGWVAALD LGNGPIWNVL
BACU012219/1-111 YQRGLTGFLG QVTRFVADFM LHHCIARWIA QRGGWVAALD LGNGPIWNVL
ENSP00000363591/1-211 YQHGLTGFLG QVTRFVVDFM LHHCIARWIA QRGGWVAALN LGNGPILNVL
ENSTTRP00000006555/1-212 YQRGLTGFLG QVTRFVADFM LHHCIARWIA QRGGWVAALD LGNGPIRNVL
ENSBTAP00000000549/1-211 YQRGLTGFLG QVTRFVADFM LRRSIARWIA QRGGWVAALD LGNGPIKSVA
201 250
bmy_14341T0/1-208 IVLAVVLLGQ FVVRRFFNS
BACU012219/1-111 IVLAVVLLGQ FVVRRFFKS
ENSP00000363591/1-211 VVLGVVLLGQ FVVRRFFKS
ENSTTRP00000006555/1-212 IGLAVVLLGQ FVLRRFFKS
ENSBTAP00000000549/1-211 IVLAVVLLGQ FVVRRFFKS