KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:11:39 2014  Check: 00 ..

 Name: ENSP00000360522/1-201     Len:    201  Check:  2229  Weight:  1.00
 Name: ENSBTAP00000000566/1-201  Len:    201  Check:  921  Weight:  1.00
 Name: bmy_08237T0/1-196         Len:    201  Check:  395  Weight:  1.00
 Name: BACU012461/1-196          Len:    201  Check:  395  Weight:  1.00
 Name: ENSTTRP00000007918/1-199  Len:    201  Check:  7320  Weight:  1.00

//


                          1                                                   50
ENSP00000360522/1-201     MKWVWALLLL AALGSGRAER DCRVSSFRVK ENFDKARFSG TWYAMAKKDP 
ENSBTAP00000000566/1-201  MEWVWALVLL AALGSARAER DCRVSSFRVK ENFDKARFAG TWYAMAKKDP 
bmy_08237T0/1-196         MEWVWALVLL AALGSARAER DCRVSSFRVK ENFDKARFSG TWYAMAKKDP 
BACU012461/1-196          MEWVWALVLL AALGSARAER DCRVSSFRVK ENFDKARFSG TWYAMAKKDP 
ENSTTRP00000007918/1-199  MEWVWALVLL AALGSVRAER DCRVSSFRVK ENFDKDRFSG TWYAMAKKDP 


                          51                                                 100
ENSP00000360522/1-201     EGLFLQDNIV AEFSVDETGQ MSATAKGRVR LLNNWDVCAD MVGTFTDTED 
ENSBTAP00000000566/1-201  EGLFLQDNIV AEFSVDENGH MSATAKGRVR LLNNWDVCAD MVGTFTDTED 
bmy_08237T0/1-196         KGLFLQDNIV AQF-MNENGH MTATAKGRVR LFNNWDLCAD MLGTFTDTED 
BACU012461/1-196          KGLFLQDNIV AQF-MNENGH MTATAKGRVR LFNNWDLCAD MLGTFTDTED 
ENSTTRP00000007918/1-199  KGLFLQDNIV AQF-MNENGH MTATAKGRVR LFNSWDLCAD MLGTFTDTED 


                          101                                                150
ENSP00000360522/1-201     PAKFKMKYWG VASFLQKGND DHWIVDTDYD TYAVQYSCRL LNLDGTCADS 
ENSBTAP00000000566/1-201  PAKFKMKYWG VASFLQKGND DHWIIDTDYE TFAVQYSCRL LNLDGTCADS 
bmy_08237T0/1-196         PAKFKMKYWG VASFLQKGND DHWIIDTDYD TYAVQYSCRL LNFDGTCADS 
BACU012461/1-196          PAKFKMKYWG VASFLQKGND DHWIIDTDYD TYAVQYSCRL LNFDGTCADS 
ENSTTRP00000007918/1-199  PAKFKMKYWG VASFLQKGND DHWIIDTDYD TYAVQYSCRL LNLDGTCADS 


                          151                                                200
ENSP00000360522/1-201     YSFVFSRDPN GLPPEAQKIV RQRQEELCLA RQYRLIVHNG YCDGRSERNL 
ENSBTAP00000000566/1-201  YSFVFARDPS GFSPEVQKIV RQRQEELCLA RQYRLIPHNG YCDGKSERNI 
bmy_08237T0/1-196         YSFVFARDLN GFSPEVQKIV RQRQEELCLA RQYRLIVHNG YCDGESE--- 
BACU012461/1-196          YSFVFARDLN GFSPEVQKIV RQRQEELCLA RQYRLIVHNG YCDGESE--- 
ENSTTRP00000007918/1-199  YSFVFARDLN GFSPEVQRIV RQRQEELCLA RQYRLIAHNG YCDGESE-NI 


                          201                                                250
ENSP00000360522/1-201     L 
ENSBTAP00000000566/1-201  L 
bmy_08237T0/1-196         - 
BACU012461/1-196          - 
ENSTTRP00000007918/1-199  L