KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:39 2014 Check: 00 .. Name: BACU004265/1-482 Len: 774 Check: 1494 Weight: 1.00 Name: ENSTTRP00000004725/1-774 Len: 774 Check: 2103 Weight: 1.00 Name: bmy_14284T0/1-450 Len: 774 Check: 7721 Weight: 1.00 Name: ENSP00000320295/1-450 Len: 774 Check: 6442 Weight: 1.00 Name: ENSBTAP00000000568/1-450 Len: 774 Check: 6442 Weight: 1.00 // 1 50 BACU004265/1-482 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004725/1-774 MPVLGPQRQL LSPLNSTSPA TPRLGLATNQ TGPQCLEVSV PEGLFLSLGL bmy_14284T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSP00000320295/1-450 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000568/1-450 ---------- ---------- ---------- ---------- ---------- 51 100 BACU004265/1-482 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004725/1-774 VSLVENMLVV AAIMKNRNLH SPMYYFICCL AASDLLVSIS NVLETAVMLL bmy_14284T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSP00000320295/1-450 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000568/1-450 ---------- ---------- ---------- ---------- ---------- 101 150 BACU004265/1-482 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000004725/1-774 LEAGALAPRA AVVQQLDDVI DVLICSSMVS SLCFLGAIAV DRYISIFYAL bmy_14284T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSP00000320295/1-450 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000568/1-450 ---------- ---------- ---------- ---------- ---------- 151 200 BACU004265/1-482 GWPSLRAAGT PGRPL----- ---------- ---------- ---------- ENSTTRP00000004725/1-774 RYHSLVTLPR AWRAIAAIWV ASILASTLFI AYYNHAAVLL CLVSFFVAML bmy_14284T0/1-450 ---------- -MREI----- ---------- ---------- ---------- ENSP00000320295/1-450 ---------- -MREI----- ---------- ---------- ---------- ENSBTAP00000000568/1-450 ---------- -MREI----- ---------- ---------- ---------- 201 250 BACU004265/1-482 -------CHS HPCLSSAPTG LT-------- ---------- ---------- ENSTTRP00000004725/1-774 VLMAVLYVHM LARACQHARG IARLHKRQRS TQQGFGLKGA ATLTILLGTF bmy_14284T0/1-450 -------VHI QAGQCGNQIG A--------- ---------- ---------- ENSP00000320295/1-450 -------VHI QAGQCGNQIG A--------- ---------- ---------- ENSBTAP00000000568/1-450 -------VHI QAGQCGNQIG A--------- ---------- ---------- 251 300 BACU004265/1-482 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004725/1-774 FLCWGPFFLH LLLIVLCPQH PTCVCIFKNF NLFLTLIICN AIVDPLIYAF bmy_14284T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSP00000320295/1-450 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000568/1-450 ---------- ---------- ---------- ---------- ---------- 301 350 BACU004265/1-482 ---------- ---------- ---SGLREHS AGQPLRSIHP PLPFWEVISD ENSTTRP00000004725/1-774 RSQELRKTLQ EVLQGSCPVH WDVQGWQKLS AALLQGLCDQ QRKFWEVISD bmy_14284T0/1-450 ---------- ---------- ---------- ---------- --KFWEVISD ENSP00000320295/1-450 ---------- ---------- ---------- ---------- --KFWEVISD ENSBTAP00000000568/1-450 ---------- ---------- ---------- ---------- --KFWEVISD 351 400 BACU004265/1-482 EHGIDPSGNY VGDSDLQLER ISVYYNEASS HKYVPRAILV DLEPGTMDSV ENSTTRP00000004725/1-774 EHGIDPSGNY VGDSDLQLER ISVYYNEASS HKYVPRAILV DLEPGTMDSV bmy_14284T0/1-450 EHGIDPSGNY VGDSDLQLER ISVYYNEASS HKYVPRAILV DLEPGTMDSV ENSP00000320295/1-450 EHGIDPSGNY VGDSDLQLER ISVYYNEASS HKYVPRAILV DLEPGTMDSV ENSBTAP00000000568/1-450 EHGIDPSGNY VGDSDLQLER ISVYYNEASS HKYVPRAILV DLEPGTMDSV 401 450 BACU004265/1-482 RSGAFGHLFR PDNFIFGQSG AGNNWAKGHY TEGAELVDSV LDVVRKECEN ENSTTRP00000004725/1-774 RSGAFGHLFR PDNFIFGQSG AGNNWAKGHY TEGAELVDSV LDVVRKECEN bmy_14284T0/1-450 RSGAFGHLFR PDNFIFGQSG AGNNWAKGHY TEGAELVDSV LDVVRKECEN ENSP00000320295/1-450 RSGAFGHLFR PDNFIFGQSG AGNNWAKGHY TEGAELVDSV LDVVRKECEN ENSBTAP00000000568/1-450 RSGAFGHLFR PDNFIFGQSG AGNNWAKGHY TEGAELVDSV LDVVRKECEN 451 500 BACU004265/1-482 CDCLQGFQLT HSLGGGTGSG MGTLLISKVR EEYPDRIMNT FSVVPSPKVS ENSTTRP00000004725/1-774 CDCLQGFQLT HSLGGGTGSG MGTLLISKVR EEYPDRIMNT FSVVPSPKVS bmy_14284T0/1-450 CDCLQGFQLT HSLGGGTGSG MGTLLISKVR EEYPDRIMNT FSVVPSPKVS ENSP00000320295/1-450 CDCLQGFQLT HSLGGGTGSG MGTLLISKVR EEYPDRIMNT FSVVPSPKVS ENSBTAP00000000568/1-450 CDCLQGFQLT HSLGGGTGSG MGTLLISKVR EEYPDRIMNT FSVVPSPKVS 501 550 BACU004265/1-482 DTVVEPYNAT LSIHQLVENT DETYCIDNEA LYDICFRTLK LATPTYGDLN ENSTTRP00000004725/1-774 DTVVEPYNAT LSIHQLVENT DETYCIDNEA LYDICFRTLK LATPTYGDLN bmy_14284T0/1-450 DTVVEPYNAT LSXHQLVENT DETYCIDNEA LYDICFRTLK LXTPTYGDLN ENSP00000320295/1-450 DTVVEPYNAT LSIHQLVENT DETYCIDNEA LYDICFRTLK LATPTYGDLN ENSBTAP00000000568/1-450 DTVVEPYNAT LSIHQLVENT DETYCIDNEA LYDICFRTLK LATPTYGDLN 551 600 BACU004265/1-482 HLVSATMSGV TPSLRFPGQL NADLRKLAVN MVPFPRLHFF MPGFAPLTAR ENSTTRP00000004725/1-774 HLVSATMSGV TTSLRFPGQL NADLRKLAVN MVPFPRLHFF MPGFAPLTAR bmy_14284T0/1-450 HLVSATMSGV TTSLRFPGQL NADLRKLAVN MVPFPRLHFF MPGFAPLTAR ENSP00000320295/1-450 HLVSATMSGV TTSLRFPGQL NADLRKLAVN MVPFPRLHFF MPGFAPLTAR ENSBTAP00000000568/1-450 HLVSATMSGV TTSLRFPGQL NADLRKLAVN MVPFPRLHFF MPGFAPLTAR 601 650 BACU004265/1-482 GSQQYRALTV PELTQQMFDA KNMMAACDPR HGRYLTVATV FRGRMSMKEV ENSTTRP00000004725/1-774 GSQQYRALTV PELTQQMFDA KNMMAACDPR HGRYLTVATV FRGRMSMKEV bmy_14284T0/1-450 GSQQYRALTV PELTQQMFDA KNMMAACDPR HGRYLTVATV FRGRMSMKEV ENSP00000320295/1-450 GSQQYRALTV PELTQQMFDA KNMMAACDPR HGRYLTVATV FRGRMSMKEV ENSBTAP00000000568/1-450 GSQQYRALTV PELTQQMFDA KNMMAACDPR HGRYLTVATV FRGRMSMKEV 651 700 BACU004265/1-482 DEQMLAIQSK NSSYFVEWIP NNVKVAVCDI PPRGLKMSST FIGNSTAIQE ENSTTRP00000004725/1-774 DEQMLAIQSK NSSYFVEWIP NNVKVAVCDI PPRGLKMSST FIGNSTAIQE bmy_14284T0/1-450 DEQMLAIQSK NSSYFVEWIP NNVKVAVCDI PPRGLKMSST FIGNSTAIQE ENSP00000320295/1-450 DEQMLAIQSK NSSYFVEWIP NNVKVAVCDI PPRGLKMSST FIGNSTAIQE ENSBTAP00000000568/1-450 DEQMLAIQSK NSSYFVEWIP NNVKVAVCDI PPRGLKMSST FIGNSTAIQE 701 750 BACU004265/1-482 LFKRISEQFT AMFRRKAFLH WYTGEGMDEM EFTEAESNMN DLVSEYQQYQ ENSTTRP00000004725/1-774 LFKRISEQFT AMFRRKAFLH WYTGEGMDEM EFTEAESNMN DLVSEYQQYQ bmy_14284T0/1-450 LFKRISEQFT AMFRRKAFLH WYTGEGMDEM EFTEAESNMN DLVSEYQQYQ ENSP00000320295/1-450 LFKRISEQFT AMFRRKAFLH WYTGEGMDEM EFTEAESNMN DLVSEYQQYQ ENSBTAP00000000568/1-450 LFKRISEQFT AMFRRKAFLH WYTGEGMDEM EFTEAESNMN DLVSEYQQYQ 751 800 BACU004265/1-482 DATAEEEGEM YEDDEEESEA QGPK ENSTTRP00000004725/1-774 DATAEEEGEM YEDDDEESEA QGPK bmy_14284T0/1-450 DATAEEEGEI YEDEEEESEA QGPK ENSP00000320295/1-450 DATAEEEGEM YEDDEEESEA QGPK ENSBTAP00000000568/1-450 DATAEEEGEM YEDDEEESEA QGPK