KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:40 2014 Check: 00 .. Name: ENSP00000400471/1-250 Len: 250 Check: 3620 Weight: 1.00 Name: ENSBTAP00000000578/1-249 Len: 250 Check: 3471 Weight: 1.00 Name: ENSTTRP00000000696/1-250 Len: 250 Check: 4498 Weight: 1.00 Name: bmy_18801T0/1-250 Len: 250 Check: 3773 Weight: 1.00 Name: BACU007962/1-250 Len: 250 Check: 3830 Weight: 1.00 // 1 50 ENSP00000400471/1-250 MGSQHSAAAR PSSCRRKQED DRDGLLAERE QEEAIAQFPY VEFTGRDSIT ENSBTAP00000000578/1-249 MGSRHSTYAH RPFSKRRKAD DTEDSLAERE QQEAIAQFPY VEFTGRDSIT ENSTTRP00000000696/1-250 MGSQQSAYAH PPSCKRKKAD DREDLLAERE QEEAIAQFPY VEFTGRDSIT bmy_18801T0/1-250 MGSQQSAYAH PRSCKRKKAD DREDLLAERE QEEAIAQFPY VEFTGRDSIT BACU007962/1-250 MGSQQSACAH PRSCKRKKAD DRKDLLAERE QEEAIAQFPY VEFTGRDSIT 51 100 ENSP00000400471/1-250 CLTCQGTGYI PTEQVNELVA LIPHSDQRLR PQRTKQYVLL SILLCLLASG ENSBTAP00000000578/1-249 CLTCQGTGYI P-EQVNELVA LIPHSDQRLR PQRTKQYVLL SILLCLLASG ENSTTRP00000000696/1-250 CLTCQGTGYI PTEQVNELVA LIPHSDQRLR PQRTKQYVLL SVLLCLLASG bmy_18801T0/1-250 CLTCQGTGYI PTEQVNELVA LIPHSDQRLR PQRTKQYVLL SVLLCLLASG BACU007962/1-250 CLTCQGTGYI PTEQVNELVA LIPHSDQRLR PQRTKQYVLL SVLLCLLASG 101 150 ENSP00000400471/1-250 LVVFFLFPHS VLVDDDGIKV VKVTFNKQDS LVILTIMATL KIRNSNFYTV ENSBTAP00000000578/1-249 LVVFFLFPHS VLVDDDGIKV VKVTFDEQRS LVILAITATL KIRNSNFYSV ENSTTRP00000000696/1-250 LVVFFLFPHS VLVDDDGIKV VKVTFNEQDS LVILAITATL KIRNSNFYSV bmy_18801T0/1-250 LVVFFLFPHS VLVDDDGIKV VKVTFNEQDS LVILAITATL KIRNSNFYSV BACU007962/1-250 LVVFFLFPHS VLVDDDGIKV VKVTFNEQDS LVILAITATL KIRNSNFYSV 151 200 ENSP00000400471/1-250 AVTSLSSQIQ YMNTVVSTYV TTNVSLIPPR SEQLVNFTGK AEMGGPFSYV ENSBTAP00000000578/1-249 AVTSLSSEVQ YMNTVVGSYT TTNISLIPPR SEHLVNFTAK AEMGGPYSYV ENSTTRP00000000696/1-250 AVTSLSSQVQ YMNTVVGSYV TTNISLIPPR SEHLVNFTVK AEMGGPFSYV bmy_18801T0/1-250 AVSSLSSQVQ YMNTVVGSHV TTNISLIPPR SEHLVNFTVK AEMGGPFSYV BACU007962/1-250 AVSSLSSQVQ YMNTVVGSYV TTNISLIPPR SEHLVNFTVK AEMGGPFSYV 201 250 ENSP00000400471/1-250 YFFCTVPEIL VHNIVIFMRT SVKISYIGLM TQSSLETHHY VDCGGNSTAI ENSBTAP00000000578/1-249 YFFCTLPYIG VHNVVVFVRT SVKISYIGHV TQSSLETHHY VDCGVNSTAV ENSTTRP00000000696/1-250 YFFCRLPDIL VHSTVVFMRT SVKISYIGHM TQSSLETHHY VDCGANSTAV bmy_18801T0/1-250 YFFCTLPDIL VHNIVVFMRT SVKISYXGHM TQSSLETHHY VDCGANSTAV BACU007962/1-250 YFFCTLPDIL VHNIVVFMRT SVKISYIGHM TQSSLETHHY VDCGANSTAV