KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:41 2014 Check: 00 .. Name: ENSP00000417222/1-417 Len: 787 Check: 4820 Weight: 1.00 Name: bmy_17323T0/1-288 Len: 787 Check: 7209 Weight: 1.00 Name: ENSBTAP00000000580/1-417 Len: 787 Check: 9818 Weight: 1.00 Name: BACU012794/1-785 Len: 787 Check: 9875 Weight: 1.00 Name: ENSTTRP00000003324/1-417 Len: 787 Check: 6090 Weight: 1.00 // 1 50 ENSP00000417222/1-417 MLALLVLVTV ALASAHHGGE HFEGEKVFRV NVEDENHINI IRELASTTQI bmy_17323T0/1-288 MLMF------ ---------- ---------- ---------- ---------- ENSBTAP00000000580/1-417 MLAFLILVTV TLASAHHSGE HFEGDKVFRV HVEDENHISL LHELASTRQM BACU012794/1-785 MLAFLILVTV TLASAHHSGE HFEGEKVFRV SVEDENDINL LRELASISQI ENSTTRP00000003324/1-417 MLAFLILVTV TLASAHNSGE HFEGEKVFRV SVENENDINL LRELASTRQI 51 100 ENSP00000417222/1-417 DFWKPDSVTQ IKPHSTVDFR VKAEDTVTVE NVLKQNELQY KVLISNLRNV bmy_17323T0/1-288 --------TG APPL------ ---------- -------IYY RVLISNLRSV ENSBTAP00000000580/1-417 DFWKPDSVTQ VKPHSTVDFR VKAEDTVAVE DFLGQNGLRY EVLISNLRSM BACU012794/1-785 DFWKPDSVTQ IKPHSTVDFR VKAEDIFTVE DFLKQNELQY EVLISNLRSV ENSTTRP00000003324/1-417 DFWKPDSVTQ IKPHSTADFR VKADDIFTVE DFLKQNELQY EVLISNLRSV 101 150 ENSP00000417222/1-417 VEAQFDSRVR ATGHSYEKYN KWETIEAWTQ QVATENPALI SRSVIGTTFE bmy_17323T0/1-288 LEAQFDSRVR ATGHSYEKYN NWETIEAWTQ QVARENPDLI SRSAIGTTFL ENSBTAP00000000580/1-417 LEAQFDSRVR TTGHSYEKYN NWETIEAWTE QVASENPDLI SRSAIGTTFL BACU012794/1-785 LEAQFDSRVR ATGHSYEKYN NWETIEAWTQ QVASENPDLI SRSAIGTTFL ENSTTRP00000003324/1-417 LEAQFDSRVR ATGHSYEKYN NWETIEAWTQ QVASENPDLI SRSAIGTTFL 151 200 ENSP00000417222/1-417 GRAIYLLKVG KAGQNKPAIF MDCGFHAREW ISPAFCQWFV REAVRTYGRE bmy_17323T0/1-288 GNTIYLLKVG RPGPNKPAIF MDCGFHAREW ISPAFCQWFV REAVRTYGHE ENSBTAP00000000580/1-417 GNTIYLLKVG KPGSNKPAVF MDCGFHAREW ISPAFCQWFV REAVRTYGRE BACU012794/1-785 GNTIYLLKVG RPGPNKPAIF MDCGFHAREW ISPAFCQWFV REAVRTYGRE ENSTTRP00000003324/1-417 GNTMYLLKVG RPGPNKPAIF MDCGFHAREW ISPAFCQWFV REAVRTYGHD 201 250 ENSP00000417222/1-417 IQVTELLDKL DFYVLPVLNI DGYIYTWTKS RFWRKTRSTH TGSSCIGTDP bmy_17323T0/1-288 IHMTEFLDKL DFYVLPVVNI DGYIHTWTKY RMWRKTRSTN AGSTCIGTDP ENSBTAP00000000580/1-417 IHMTEFLDKL DFYVLPVVNI DGYIYTWTTN RMWRKTRSTR AGSSCTGTDL BACU012794/1-785 IHMTEFLDKL DFYVLPVVNI DGYIYTWTKY RMWRKTRSTN AGSTCIGTDP ENSTTRP00000003324/1-417 RNMTEFLDKL DFYVLPVVNI DGYIYTWTKY RMWRKTRSTN AGSTCIGTDP 251 300 ENSP00000417222/1-417 NRNFDAGWCE IGASRNPCDE TYCGPAAESE KETKALADFI RNKLSSIKAY bmy_17323T0/1-288 NRNFDAGWCS VGASKNPCDE TYCGSAAESE KETKALANFI RNNLSSIKAY ENSBTAP00000000580/1-417 NRNFDAGWCS IGASNNPCSE TYCGSAAESE KESKAVADFI RNHLSSIKAY BACU012794/1-785 NRNFDAGWCS VGASKNPCHE TYCGSAAESE KETKALANFI RNNLSSIKAY ENSTTRP00000003324/1-417 NRNFDAGWCT IGASKNPCDE TYCGSAAESE KETKALANFI RNNLSSIKAY 301 350 ENSP00000417222/1-417 LTIHSYSQMM IYPYSYAYKL GENNAELNAL AKATVKELAS LHGTKYTYGP bmy_17323T0/1-288 LTIHSYSQMM LYPYSYDYKL PKNNAE---- -------LVS SHGSR----- ENSBTAP00000000580/1-417 LTIHSYSQMM LYPYSYDYKL PKNNVELNTL AKGAVKKLAS LHGTTYTYGP BACU012794/1-785 LTIHSYSQMM LYPYSYDYKL PKNNAELNSI AKAAVKELAT LHGTKYTYGP ENSTTRP00000003324/1-417 LTIHSYSQMI LYPYSYDYKL PENNAELNSM AKGAMEELAT LYRTKYKYGP 351 400 ENSP00000417222/1-417 GATTIYPAAG GSDDWAYDQG IRYSFTFELR DTGRYGFLLP ESQ--IRATC bmy_17323T0/1-288 ---------- ---------- --YSISLL-- ---RFLNSIP GKKNIIQTIS ENSBTAP00000000580/1-417 GASTIYPASG GSDDWAYDQG IKYSFTFELR DKGRYGFVLP ESQ--IQPTC BACU012794/1-785 GASTIYPAAG GSDDWAYDQG IKYSFTFELR DKGRYGFALP ESQ--IRPTC ENSTTRP00000003324/1-417 GASTIYPAAG GSDDWAYDQG IKYSFTFELR DKGRYGFALP ESQ--IRPTC 401 450 ENSP00000417222/1-417 EETFLAIKYV ASYVLEHLY- ---------- ---------- ---------- bmy_17323T0/1-288 GSSILDFQ-- ---------- ---------- ---------- ---------- ENSBTAP00000000580/1-417 EETMLAIKYV TSYVLEHLY- ---------- ---------- ---------- BACU012794/1-785 EETMLAIKYI TGYVLEHLIL IHDVQEEAEK QFDVKEDIPG RQSYAKYNNR ENSTTRP00000003324/1-417 EETMLAIKYI TGYVLKHLY- ---------- ---------- ---------- 451 500 ENSP00000417222/1-417 ---------- ---------- ---------- ---------- ---------- bmy_17323T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000580/1-417 ---------- ---------- ---------- ---------- ---------- BACU012794/1-785 DKIVAWTEKM VHKHPKMVSR IKIGTTVEDN PLYVLKIGEK DERRKAIFMD ENSTTRP00000003324/1-417 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000417222/1-417 ---------- ---------- ---------- ---------- ---------- bmy_17323T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000580/1-417 ---------- ---------- ---------- ---------- ---------- BACU012794/1-785 CGIHAQEWIS PAFCQWFVYQ ATKTYGKNKI MTKLLDRMNF YVLPVFSVDG ENSTTRP00000003324/1-417 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000417222/1-417 ---------- ---------- ---------- ---------- ---------- bmy_17323T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000580/1-417 ---------- ---------- ---------- ---------- ---------- BACU012794/1-785 YIWSWRQDRT WRKNRSKNQR SKCIGTDLNR NFNVSGNSFP HTKDPCWEIY ENSTTRP00000003324/1-417 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000417222/1-417 ---------- ---------- ---------- ---------- ---------- bmy_17323T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000580/1-417 ---------- ---------- ---------- ---------- ---------- BACU012794/1-785 RGPAPESEKE TKAVTDFIRS HRKSIKAYLT FHSYSQMLLF PYGYTSELPP ENSTTRP00000003324/1-417 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000417222/1-417 ---------- ---------- ---------- ---------- ---------- bmy_17323T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000580/1-417 ---------- ---------- ---------- ---------- ---------- BACU012794/1-785 NQEELAKVAK IGTDVLSTQY EPNPHLWSNS INHFTVNQRK VAATPGFHQP ENSTTRP00000003324/1-417 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000417222/1-417 ---------- ---------- ---------- ---------- ---------- bmy_17323T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000580/1-417 ---------- ---------- ---------- ---------- ---------- BACU012794/1-785 PHPPNSRFNA GLRLHISFCV KHYVFDPTSG SSLDWAYNLG IKHTFAFEPR ENSTTRP00000003324/1-417 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000417222/1-417 ---------- ---------- ---------- ------- bmy_17323T0/1-288 ---------- ---------- ---------- ------- ENSBTAP00000000580/1-417 ---------- ---------- ---------- ------- BACU012794/1-785 DKGKFGFLLP ESQIKSTCKE TMLAVKFIVK YILEHTS ENSTTRP00000003324/1-417 ---------- ---------- ---------- -------