KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:42 2014 Check: 00 .. Name: ENSTTRP00000009544/1-549 Len: 556 Check: 6941 Weight: 1.00 Name: ENSP00000258214/1-550 Len: 556 Check: 5231 Weight: 1.00 Name: BACU001832/1-376 Len: 556 Check: 4294 Weight: 1.00 Name: ENSBTAP00000000588/1-555 Len: 556 Check: 688 Weight: 1.00 Name: bmy_12167T0/1-552 Len: 556 Check: 2359 Weight: 1.00 // 1 50 ENSTTRP00000009544/1-549 MSHGPSPRLA ESPQLSKGSL LTILGSPSPE RMGPADSLPP TPPSGTPSPG ENSP00000258214/1-550 MSHGPSPRLA ESPQLSKGSL LTILGSPSPE RMGPADSLPP TPPSGTPSPG BACU001832/1-376 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000588/1-555 MSHGPSPRLA ESPQLSKGSL LTILGSPSPE RMGPADSLPP TPPSGTPSPG bmy_12167T0/1-552 MSHGPSPRLA ESPQLSKGSL LTILGSPSPE RMGPADSLPP TPPSGTPSPG 51 100 ENSTTRP00000009544/1-549 PPPALPLPPA PALLADGDWE SREELRLREL EE-RARAAQM EKTMRWWSDC ENSP00000258214/1-550 PPPALPLPPA PALLADGDWE SREELRLREL EEARARAAQM EKTMRRWSDC BACU001832/1-376 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000588/1-555 PPPALPLPPT PALLADGDWE SREELRLREL EEARARAAQM EKTMRWWSDC bmy_12167T0/1-552 PPPALPLPPA PALLADGDWE SREELRLREL EEARARAAQM EKTMRWWSDC 101 150 ENSTTRP00000009544/1-549 TVNWREKWST VRAERXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000258214/1-550 TANWREKWSK VRAERNRARE EVRQLRQRLD ALTKELAGAR RERQEAQGEC BACU001832/1-376 -----MKAKR VRIQR----- ---------- ---------- ---------- ENSBTAP00000000588/1-555 TANWREKWSK VRAERNRARE EVRQLRQRLD ALTKELAGAR RERQEAQGES bmy_12167T0/1-552 TANWREKWSK VRAERNRARE EVRQLRQRLD ALTKELAGAR RERQEAQGEC 151 200 ENSTTRP00000009544/1-549 XXXXXXXXXX XXXXXXXXXX XXXXEPEREQ E----PVRDV GS--ERPTGS ENSP00000258214/1-550 EARGRELARL RGARGVADQT RDGPEPEAER E----PVRDV GS--ERPPGS BACU001832/1-376 ---------- ---------- ---PLTQPP- ---------- ------PWTP ENSBTAP00000000588/1-555 EARGRELARL RGARGGVDRT PDGPETEPER EQEPVPVRDV GSGCERPQGS bmy_12167T0/1-552 EARGRELARL RGARGVTDRT PDGPETEPER EQE--PVRDV GS--ERPQGS 201 250 ENSTTRP00000009544/1-549 QELELVEGLL KSRPEEPEGC WEARSVGAGA SRGSSGRQER SRLPWEDTAT ENSP00000258214/1-550 QELELVESLL KSMPEESEDC WEARSLGAGG PRGSSGRQER SRLPWEDTAA BACU001832/1-376 QELELVEGLL KSRPEEPEGC WEARSVGAGA SRGSSGRQER SRLPWEDTAT ENSBTAP00000000588/1-555 QELELMESLL KNRPEEPEGC WEVRSAGAGA PRGSSGRQER GRLPWEDT-T bmy_12167T0/1-552 QELELVEGLL KSRPEEPEGC WEARSIGAGA SRGSSGRQER SRLPWEDTAA 251 300 ENSTTRP00000009544/1-549 IEEDASKLTA LRLRLDESQK VLLKEREDKM ALSRNIEKLE GELSQWKIKY ENSP00000258214/1-550 TEEEASKLTA LRLRLDESQK VLLKEREDKL ALSRNIEKLE GELSQWKIKY BACU001832/1-376 IEEDASKLTA LRLRLDESQK VLLKEREDKM ALSRNIEKLE GELSQWKIKY ENSBTAP00000000588/1-555 VEEDASKLTA LRLRLDESQK VLLKEREDKM ALSRNIEKLE GELSQWKIKY bmy_12167T0/1-552 IEEDASKLTA LRLRLDESQK VLLKEREDKM ALSRNIEKLE GELSQWKIKY 301 350 ENSTTRP00000009544/1-549 EELSKTKQEM LKQLSILKEA HQDELGRMSE DLEDELGARS SMDRKMAELR ENSP00000258214/1-550 EELSKTKQEM LKQLSILKEA HQDELGRMSE DLEDELGARS SMDRKMAELR BACU001832/1-376 EELSKTKQEM LKQLSILKEA HQDELGRMSE DLEDELGARS SMDRKMAELR ENSBTAP00000000588/1-555 EELSKTKQEM LKQLSILKEA HQDELGRMSE DLEDELGARS SMDRKMAELR bmy_12167T0/1-552 EELSKTKQEM LKQLSILKEA HQDELGRMSE DLEDELGARS SMDRKMAELR 351 400 ENSTTRP00000009544/1-549 GEMERLQAEN AAEWGRRERL ETEKLGLERE NKKLRAQVGD LEEALARRRR ENSP00000258214/1-550 GEMERLQAEN AAEWGRRERL ETEKLGLERE NKKLRAQVGD LEEALARRRR BACU001832/1-376 GEMERLQAEN AAEWGRRERL ETEKLGLERE NKKLRAQVGD LEEALARRRR ENSBTAP00000000588/1-555 GEMERLQAEN AAEWGRRERL ETEKLGLERE NKKLRAQVGD LEEALARRRR bmy_12167T0/1-552 GEMERLQAEN AAEWGRRERL ETEKLGLERE NKKLRAQVGD LEEALARRRR 401 450 ENSTTRP00000009544/1-549 QTASALDCDL RASQAALFEK NKELADLKHA HSKLKKQFQE KAAELAHANR ENSP00000258214/1-550 QTASALDCDL RASQAALFEK NKELADLKHV HGKLKKQFQE KVAELAHANR BACU001832/1-376 QTASALDCDL RASQAALFEK NKELADLKHV HSKLKKQFQE KVAELAHANR ENSBTAP00000000588/1-555 QTASALDCDL RASQAALFEK NKELADLKHV HGKLKKQFQE KVAELAHANR bmy_12167T0/1-552 QTASALDCDL RASQAALFEK NKELADLKHV HSKLKKQFQE KVAELAHANR 451 500 ENSTTRP00000009544/1-549 RVEQHEAEVK KLRLRVEELK KELAQAEDEL DEAHNQARKL QRSLDEQTEQ ENSP00000258214/1-550 RVEQHEAEVK KLRLRVEELK KELAQAEDEL DEAHNQARKL QRSLDEQTEQ BACU001832/1-376 RVEQHEAEVK KLRLRVEELK KELAQAEDEL DEAHNQARKL QRSLDEQTEQ ENSBTAP00000000588/1-555 RVEQHEAEVK KLRLRVEELK KELAQAEDEL DEAHNQARKL QRSLDEQTEQ bmy_12167T0/1-552 RVEQHEAEVK KLRLRVEELK KELAQAEDEL DEAHNQARKL QRSLDEQTEQ 501 550 ENSTTRP00000009544/1-549 SENLQVQLEH VQSRLRRQQQ NAPLFGKIRS ARFGAEEAGD GASDLDEDED ENSP00000258214/1-550 SENLQVQLEH LQSRLRRQQQ NAPLFGKIRS ARFGTEEAED GTSDLDEDED BACU001832/1-376 SENLQVQLEH VQSRLRRQQQ NAPLFGKIRS ARFGAEEAGD GASDLDEDED ENSBTAP00000000588/1-555 SENLQVQLEH VQSRLRRQQQ NAPLFGKIRS ARFGAEEAGD GASDLDEDED bmy_12167T0/1-552 SENLQVQLEH VQSRLRRQQQ NAPLFGKIRS ARFGAEEAGD GASDLDEDED 551 600 ENSTTRP00000009544/1-549 LQIQVA ENSP00000258214/1-550 LQIQVA BACU001832/1-376 LQIQVA ENSBTAP00000000588/1-555 LQIQVA bmy_12167T0/1-552 LQIQVA