KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:43 2014 Check: 00 .. Name: ENSP00000226284/1-317 Len: 325 Check: 6265 Weight: 1.00 Name: ENSBTAP00000000595/1-310 Len: 325 Check: 7973 Weight: 1.00 Name: ENSTTRP00000003304/1-317 Len: 325 Check: 3321 Weight: 1.00 Name: bmy_22259T0/1-317 Len: 325 Check: 1883 Weight: 1.00 Name: BACU010631/1-316 Len: 325 Check: 8286 Weight: 1.00 // 1 50 ENSP00000226284/1-317 MKTALILLSI LGMACAFSMK NLHRRVKIED SEENGVFKYR PRYYLYKHAY ENSBTAP00000000595/1-310 MKTVLILLSI LGMACALSMK NLNRRAKLED SEENGVFKYR PQYYVYKHGY ENSTTRP00000003304/1-317 MKTALVLLSI LGMACALSMK NLHRRGKLED SEENGVYKYR PRYYLYKHAY bmy_22259T0/1-317 MKTALILLSI LGMACALSMK NLHRRAKLED SEENGVFKYR PRYYLYKHAY BACU010631/1-316 MKTALILLSI LGMACALSMK NLHRRAKLED SEENGVFKYR ARYYLYKHAY 51 100 ENSP00000226284/1-317 FYPHLKRFPV QGSSDSSEEN GD-DSSEEEE EEEETSNEGE NNEES----- ENSBTAP00000000595/1-310 FYPALKRFAV QSSSDSSEEN GNGDSSEEEE EEEETSNEEG NNGGNEDSDE ENSTTRP00000003304/1-317 FYPPLKRFPV QSSSDLSEEN EN-GESSEEE EEKETSNEEE NNEENEDSEG bmy_22259T0/1-317 FYPPLKRFPV QSSSDLSEEN GN-DDSSEEE EEEETSNEEE NNEENEDSDG BACU010631/1-316 FYPPLKRFPV QSSSDLSEEN GN-DDSSEEE EEEETSNEEE NNEENEDSDG 101 150 ENSP00000226284/1-317 NEDEDSEAEN TTLSATTLGY GEDATPGTGY TGLAAIQLPK KAGDITNKAT ENSBTAP00000000595/1-310 NEDEESEAEN TTLSTTTLGY GE-ITPGTGD IGLAAIWLPR KAGATGKKAT ENSTTRP00000003304/1-317 NEDEESEAEN TTLSITTLGY GEETAPGTGY IGLAAIQLPT QAGDIGKAAT bmy_22259T0/1-317 NEDEESEAEN TTLSITTLGY GEETTPGTGS IGLAAIQLPT KAGDIGKKAT BACU010631/1-316 NEDEESEAEN TTLSITTLGY GEETTPGTGN IGLAAIQLPT KAGDIGKKVT 151 200 ENSP00000226284/1-317 KEKESDEEEE EEEEGNENEE SEAEVDENEQ GINGTSTNST EAENGNGSSG ENSBTAP00000000595/1-310 KEDESDEEEE EEEE----EE NEAEVDDNEQ GINGTSSNST EVDNGHGSSG ENSTTRP00000003304/1-317 EEEESDEEGG EE------NE NEAEVDDNEQ GVNGTSANST EIDNGHGSSG bmy_22259T0/1-317 KEEESDEEEE EE------NE NEAEGDDNEQ GINGTGTNST EVDNGRGSSG BACU010631/1-316 KEEESDEEEE EE------NE NEAEADDNEQ GINGTSTNGT EIDNGHGSSG 201 250 ENSP00000226284/1-317 GDNGEE-GEE ESVTGANAED TTETGRQGKG TSKTTTSPNG GFEPTTPPQ- ENSBTAP00000000595/1-310 GDNGEEDGEE ESVTEANTEG ITVAG----- --ETTTSPNG GFKPTTPHQE ENSTTRP00000003304/1-317 GDNGEEEGEE D-VTEANAEG TTVAGGQDNG GSKATTSPNG GFEPTAPPQE bmy_22259T0/1-317 GDNGEEEGEE G-VTEANAEG TTVAGGQDNG GSKATTSPNG GFEPTTPPQE BACU010631/1-316 GDNGEEEGEE G-VTEANAEG TTVAGGQDNG GSKATTSPNG GVGPTTPPQE 251 300 ENSP00000226284/1-317 VYRTTSPPFG KTTTVEYEGE YEYTGANEYD NGYEIYESEN GEPRGDNYRA ENSBTAP00000000595/1-310 VYGTTPPPFG KITTP---GE YEQTGTNEYD NGYEIYESEN GDPRGDNYRA ENSTTRP00000003304/1-317 IYGTTPPPSG ETTTPGYEGE YEQTGTNEYD NGYEIYENEN GEPRGDNYRA bmy_22259T0/1-317 IYGTTPPPFG ETPTPGYEGE YEQTGTNDYD NGYEIYENEN GEPRGDNYRA BACU010631/1-316 IDGTTPPPFG ETTTPGYEGE YEQTGTNEYD NGYEIYENEN GEPRGDNYRA 301 350 ENSP00000226284/1-317 YEDEYSYFKG QGYDGYDGQN YYHHQ ENSBTAP00000000595/1-310 YEDEYSYYKG RGYDSYDGQD YYSHQ ENSTTRP00000003304/1-317 YEDEYSYYKG RSYDGYDGQD YYYHQ bmy_22259T0/1-317 YEDEYSYYKG RSYDGYDGQD YYYHQ BACU010631/1-316 YEDEYSYYKG RSYDGYDGQD YYHQ-